RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 C7orf33Q8WU49 177 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 ZGRF1Q86YA3 2104 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 FREM1Q5H8C1 2179 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 IGHV3OR16-8A0A075B7F1 116 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 IGHV3-73A0A0B4J1V6 119 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 RTL8CO15255 209 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 IGKV3-20P01619 116 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 Q86TA4 180 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 Q8NAQ8 132 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 ARFGEF3Q5TH69 2177 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 ATRXP46100 2492 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 PDE4DIPQ5VU43 2346 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 PRRC2AP48634 2157 aaKnown RBP2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 COL4A1P02462 1669 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 IGKV1D-42A0A075B6H8 117 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 IGHV7-4-1A0A0J9YVY3 117 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 CLPSP04118 112 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 CTSGP08311 255 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 P0C879 139 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 RPS27P42677 84 aaKnown RBP2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 HIGD2BQ4VC39 106 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 FAM27BQ5VT28 67 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 CSAG1Q6PB30 78 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 Q8NBF4 154 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 MRPL36Q9P0J6 103 aaKnown RBP2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 SDK2Q58EX2 2172 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 FREM3P0C091 2139 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 CUL9Q8IWT3 2517 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 LINC01565O15544 149 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 NNATQ16517 81 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 HIGD2AQ9BW72 106 aa2.04□□□□□ -2.08
SNRNP48-202ENST00000496946 BAHCC1Q9P281 2608 aa2.03□□□□□ -2.08
SNRNP48-202ENST00000496946 IGLV4-69A0A075B6H9 119 aa2.03□□□□□ -2.08
SNRNP48-202ENST00000496946 LCE6AA0A183 80 aa2.03□□□□□ -2.08
SNRNP48-202ENST00000496946 NDPQ00604 133 aa2.03□□□□□ -2.08
SNRNP48-202ENST00000496946 C14orf177Q52M58 125 aa2.03□□□□□ -2.08
SNRNP48-202ENST00000496946 HCP5Q6MZN7 132 aa2.03□□□□□ -2.08
SNRNP48-202ENST00000496946 LINC00208Q96KT6 92 aa2.03□□□□□ -2.08
SNRNP48-202ENST00000496946 LENEPQ9Y5L5 61 aa2.03□□□□□ -2.08
SNRNP48-202ENST00000496946 DOCK10Q96BY6 2186 aa2.03□□□□□ -2.08
SNRNP48-202ENST00000496946 IGHV3-15A0A0B4J1V0 119 aa2.03□□□□□ -2.09
SNRNP48-202ENST00000496946 A0A1W2PNM2 257 aa2.03□□□□□ -2.09
SNRNP48-202ENST00000496946 CLPSL1A2RUU4 121 aa2.03□□□□□ -2.09
SNRNP48-202ENST00000496946 H0YGX0 51 aa2.03□□□□□ -2.09
SNRNP48-202ENST00000496946 IGLV1-47P01700 117 aa2.03□□□□□ -2.09
SNRNP48-202ENST00000496946 KRTAP10-7P60409 375 aaPredicted RBP2.03□□□□□ -2.09
SNRNP48-202ENST00000496946 SPAG11BQ08648 103 aa2.03□□□□□ -2.09
SNRNP48-202ENST00000496946 SPAG11AQ6PDA7 123 aa2.03□□□□□ -2.09
SNRNP48-202ENST00000496946 MUC7Q8TAX7 377 aa2.03□□□□□ -2.09
SNRNP48-202ENST00000496946 ZNF625Q96I27 306 aaPredicted RBP2.03□□□□□ -2.09
SNRNP48-202ENST00000496946 LITAFQ99732 161 aa2.03□□□□□ -2.09
SNRNP48-202ENST00000496946 LINC01558Q9Y6Z2 57 aa2.03□□□□□ -2.09
SNRNP48-202ENST00000496946 PRR14LQ5THK1 2151 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 IGHV3-66A0A0C4DH42 116 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 TRBV10-1A0A0K0K1A3 114 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 IGHV3-23P01764 117 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 Q6ZR54 194 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 CAMK2N1Q7Z7J9 78 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 DEFB123Q8N688 67 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 ZCCHC13Q8WW36 166 aaKnown RBP2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 SMIM2Q9BVW6 85 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 MED12Q93074 2177 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 SHANK1Q9Y566 2161 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 IGLV1-50A0A075B6I6 118 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 NCR3O14931 201 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 IGHV1-8P0DP01 117 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 HAMPP81172 84 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 LCE1FQ5T754 118 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 MIR7-3HGQ8N6C7 128 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 Q8TAT8 98 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 CHCHD7Q9BUK0 85 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 CNFNQ9BYD5 112 aa2.02□□□□□ -2.09
SNRNP48-202ENST00000496946 PRRC2BQ5JSZ5 2229 aaKnown RBP2.01□□□□□ -2.09
SNRNP48-202ENST00000496946 A0A087WSZ3 146 aa2.01□□□□□ -2.09
SNRNP48-202ENST00000496946 IGLV1-44P01699 117 aa2.01□□□□□ -2.09
SNRNP48-202ENST00000496946 IGHV1-46P01743 117 aa2.01□□□□□ -2.09
SNRNP48-202ENST00000496946 P0C880 135 aa2.01□□□□□ -2.09
SNRNP48-202ENST00000496946 PDE6HQ13956 83 aa2.01□□□□□ -2.09
SNRNP48-202ENST00000496946 SPANXA2-OT1Q8N9U9 137 aa2.01□□□□□ -2.09
SNRNP48-202ENST00000496946 LINC01006Q8NI28 216 aa2.01□□□□□ -2.09
SNRNP48-202ENST00000496946 FAM215AQ9Y5M1 114 aa2.01□□□□□ -2.09
SNRNP48-202ENST00000496946 CEP192Q8TEP8 1941 aa2.01□□□□□ -2.09
SNRNP48-202ENST00000496946 DNAH10OSP0CZ25 163 aa2.01□□□□□ -2.09
SNRNP48-202ENST00000496946 PDE6GP18545 87 aa2.01□□□□□ -2.09
SNRNP48-202ENST00000496946 COX7B2Q8TF08 81 aa2.01□□□□□ -2.09
SNRNP48-202ENST00000496946 C20orf166-AS1Q96NR2 134 aa2.01□□□□□ -2.09
SNRNP48-202ENST00000496946 PLAC8Q9NZF1 115 aa2.01□□□□□ -2.09
SNRNP48-202ENST00000496946 IGHV1-3A0A0C4DH29 117 aa2□□□□□ -2.09
SNRNP48-202ENST00000496946 INSP01308 110 aa2□□□□□ -2.09
SNRNP48-202ENST00000496946 CNBPP62633 177 aaKnown RBP2□□□□□ -2.09
SNRNP48-202ENST00000496946 C9orf129Q5T035 196 aaKnown RBP2□□□□□ -2.09
SNRNP48-202ENST00000496946 KPRPQ5T749 579 aaPredicted RBP2□□□□□ -2.09
SNRNP48-202ENST00000496946 C10orf113Q5VZT2 155 aa2□□□□□ -2.09
SNRNP48-202ENST00000496946 CIRBP-AS1Q8TBR5 109 aa2□□□□□ -2.09
SNRNP48-202ENST00000496946 TTTY12Q9BZ98 90 aa2□□□□□ -2.09
SNRNP48-202ENST00000496946 CACNA1DQ01668 2161 aa2□□□□□ -2.09
SNRNP48-202ENST00000496946 IGKV3D-15A0A087WSY6 115 aa2□□□□□ -2.09
SNRNP48-202ENST00000496946 A6NDX4 124 aa2□□□□□ -2.09
SNRNP48-202ENST00000496946 C17orf98A8MV24 154 aa2□□□□□ -2.09
SNRNP48-202ENST00000496946 DEFB113Q30KQ7 82 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms