RNA–Protein interactions for RNA: ENST00000496574.6

PKD1-222, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,419 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-222ENST00000496574 CCL18P55774 89 aa10.34□□□□□ -0.75
PKD1-222ENST00000496574 NRGNQ92686 78 aa10.34□□□□□ -0.75
PKD1-222ENST00000496574 RPL28P46779 137 aaKnown RBP10.33□□□□□ -0.76
PKD1-222ENST00000496574 SMIM1B2RUZ4 78 aa10.33□□□□□ -0.76
PKD1-222ENST00000496574 SPART-AS1P0CW21 52 aa10.33□□□□□ -0.76
PKD1-222ENST00000496574 PPDPFQ9H3Y8 114 aa10.33□□□□□ -0.76
PKD1-222ENST00000496574 TRBV6-4A0A1B0GX49 114 aa10.32□□□□□ -0.76
PKD1-222ENST00000496574 J3QKU1 62 aa10.32□□□□□ -0.76
PKD1-222ENST00000496574 LOC107984640A0A0U1RRK4 108 aa10.32□□□□□ -0.76
PKD1-222ENST00000496574 IGLV1-40P01703 118 aa10.32□□□□□ -0.76
PKD1-222ENST00000496574 WFDC11Q8NEX6 87 aa10.32□□□□□ -0.76
PKD1-222ENST00000496574 CHCHD10Q8WYQ3 142 aaPredicted RBP10.32□□□□□ -0.76
PKD1-222ENST00000496574 CDC42SE2Q9NRR3 84 aa10.32□□□□□ -0.76
PKD1-222ENST00000496574 REG3AQ06141 175 aa10.31□□□□□ -0.76
PKD1-222ENST00000496574 PTPRBP23467 1997 aa10.31□□□□□ -0.76
PKD1-222ENST00000496574 ATP5EP56381 51 aaPredicted RBP10.3□□□□□ -0.76
PKD1-222ENST00000496574 SBSPONQ8IVN8 264 aa10.3□□□□□ -0.76
PKD1-222ENST00000496574 KIF25-AS1Q9Y6Z4 181 aa10.3□□□□□ -0.76
PKD1-222ENST00000496574 Q6ZQY7 126 aa10.3□□□□□ -0.76
PKD1-222ENST00000496574 CHCHD7Q9BUK0 85 aa10.3□□□□□ -0.76
PKD1-222ENST00000496574 FN1P02751 2386 aaKnown RBP10.3□□□□□ -0.76
PKD1-222ENST00000496574 CCKP06307 115 aa10.3□□□□□ -0.76
PKD1-222ENST00000496574 FASNP49327 2511 aaKnown RBP10.29□□□□□ -0.76
PKD1-222ENST00000496574 UBE2DNLQ8IWF7 75 aa10.29□□□□□ -0.76
PKD1-222ENST00000496574 SMIM26A0A096LP01 95 aa10.29□□□□□ -0.76
PKD1-222ENST00000496574 DEFB4AO15263 64 aa10.29□□□□□ -0.76
PKD1-222ENST00000496574 RMI2Q96E14 147 aa10.29□□□□□ -0.76
PKD1-222ENST00000496574 CSDC2Q9Y534 153 aaKnown RBP10.28□□□□□ -0.76
PKD1-222ENST00000496574 EDN2P20800 178 aa10.28□□□□□ -0.76
PKD1-222ENST00000496574 COX6A2Q02221 97 aa10.28□□□□□ -0.76
PKD1-222ENST00000496574 DEFB135Q30KP9 77 aa10.27□□□□□ -0.77
PKD1-222ENST00000496574 TRAV7A0A075B6U4 112 aa10.26□□□□□ -0.77
PKD1-222ENST00000496574 XAGE1AQ9HD64 81 aa10.26□□□□□ -0.77
PKD1-222ENST00000496574 A0A087WYN8 130 aa10.26□□□□□ -0.77
PKD1-222ENST00000496574 PRORYQ9H606 182 aa10.26□□□□□ -0.77
PKD1-222ENST00000496574 V9GYY9 64 aa10.26□□□□□ -0.77
PKD1-222ENST00000496574 LINC00959A0A1B0GUT2 108 aa10.25□□□□□ -0.77
PKD1-222ENST00000496574 DEFB113Q30KQ7 82 aa10.25□□□□□ -0.77
PKD1-222ENST00000496574 A0A0C4DFX4 3053 aa10.25□□□□□ -0.77
PKD1-222ENST00000496574 LOC100131303A0A0U1RQF7 123 aa10.25□□□□□ -0.77
PKD1-222ENST00000496574 C19orf84I3L1E1 186 aa10.25□□□□□ -0.77
PKD1-222ENST00000496574 FAM19A3Q7Z5A8 133 aa10.25□□□□□ -0.77
PKD1-222ENST00000496574 SERP1Q9Y6X1 66 aa10.25□□□□□ -0.77
PKD1-222ENST00000496574 NTM-AS1Q6ZSK4 140 aa10.24□□□□□ -0.77
PKD1-222ENST00000496574 BPTFQ12830 3046 aa10.24□□□□□ -0.77
PKD1-222ENST00000496574 LINC00315P59091 139 aa10.24□□□□□ -0.77
PKD1-222ENST00000496574 LINC00846Q9NV44 126 aa10.24□□□□□ -0.77
PKD1-222ENST00000496574 Q6YL49 198 aa10.24□□□□□ -0.77
PKD1-222ENST00000496574 PKD1L2Q7Z442 2459 aa10.24□□□□□ -0.77
PKD1-222ENST00000496574 DOPEY1Q5JWR5 2465 aa10.23□□□□□ -0.77
PKD1-222ENST00000496574 C9orf66Q5T8R8 295 aa10.23□□□□□ -0.77
PKD1-222ENST00000496574 CD164L2Q6UWJ8 174 aa10.22□□□□□ -0.77
PKD1-222ENST00000496574 NDUFS5O43920 106 aa10.22□□□□□ -0.77
PKD1-222ENST00000496574 BRCA2P51587 3418 aa10.22□□□□□ -0.77
PKD1-222ENST00000496574 ABCA12Q86UK0 2595 aa10.22□□□□□ -0.77
PKD1-222ENST00000496574 Q8IZM0 81 aa10.21□□□□□ -0.78
PKD1-222ENST00000496574 MIFP14174 115 aa10.21□□□□□ -0.78
PKD1-222ENST00000496574 Q8N814 137 aa10.21□□□□□ -0.78
PKD1-222ENST00000496574 NDUFB1O75438 58 aa10.2□□□□□ -0.78
PKD1-222ENST00000496574 DEFB121Q5J5C9 76 aa10.2□□□□□ -0.78
PKD1-222ENST00000496574 ZNF462Q96JM2 2506 aa10.2□□□□□ -0.78
PKD1-222ENST00000496574 RAI1Q7Z5J4 1906 aaPredicted RBP10.2□□□□□ -0.78
PKD1-222ENST00000496574 CRYGAP11844 174 aa10.19□□□□□ -0.78
PKD1-222ENST00000496574 C3orf84H3BNL1 204 aa10.19□□□□□ -0.78
PKD1-222ENST00000496574 A0A087WZ39 114 aa10.18□□□□□ -0.78
PKD1-222ENST00000496574 BRI3O95415 125 aa10.18□□□□□ -0.78
PKD1-222ENST00000496574 Q6ZSN1 163 aa10.18□□□□□ -0.78
PKD1-222ENST00000496574 FAM19A1Q7Z5A9 133 aa10.18□□□□□ -0.78
PKD1-222ENST00000496574 COX17Q14061 63 aa10.18□□□□□ -0.78
PKD1-222ENST00000496574 CDSNQ15517 529 aa10.18□□□□□ -0.78
PKD1-222ENST00000496574 C1orf195Q5TG92 126 aa10.18□□□□□ -0.78
PKD1-222ENST00000496574 SPTSSBQ8NFR3 76 aa10.18□□□□□ -0.78
PKD1-222ENST00000496574 HTTP42858 3142 aa10.18□□□□□ -0.78
PKD1-222ENST00000496574 ZNF702PQ9H963 129 aa10.18□□□□□ -0.78
PKD1-222ENST00000496574 C1orf158Q8N1D5 194 aa10.17□□□□□ -0.78
PKD1-222ENST00000496574 LINC00337Q8N6G1 96 aa10.17□□□□□ -0.78
PKD1-222ENST00000496574 ZFYVE26Q68DK2 2539 aa10.17□□□□□ -0.78
PKD1-222ENST00000496574 C18orf65Q6ZTR6 163 aa10.17□□□□□ -0.78
PKD1-222ENST00000496574 LYRM9A8MSI8 78 aa10.17□□□□□ -0.78
PKD1-222ENST00000496574 Q8N2B8 174 aa10.17□□□□□ -0.78
PKD1-222ENST00000496574 DNAJC9-AS1A6NH13 148 aa10.16□□□□□ -0.78
PKD1-222ENST00000496574 FHL3Q13643 280 aa10.16□□□□□ -0.78
PKD1-222ENST00000496574 BBC3Q96PG8 261 aaPredicted RBP10.16□□□□□ -0.78
PKD1-222ENST00000496574 MKI67P46013 3256 aaKnown RBP10.16□□□□□ -0.78
PKD1-222ENST00000496574 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.15□□□□□ -0.78
PKD1-222ENST00000496574 IGLV5-39A0A0G2JS06 123 aa10.15□□□□□ -0.78
PKD1-222ENST00000496574 PRR3P79522 188 aaKnown RBP10.15□□□□□ -0.78
PKD1-222ENST00000496574 Q8N3U1 123 aa10.15□□□□□ -0.78
PKD1-222ENST00000496574 RPS28P62857 69 aaKnown RBP10.15□□□□□ -0.79
PKD1-222ENST00000496574 BEAN1Q3B7T3 259 aa10.14□□□□□ -0.79
PKD1-222ENST00000496574 IGLV4-60A0A075B6I1 120 aa10.14□□□□□ -0.79
PKD1-222ENST00000496574 HILS1P60008 231 aa10.14□□□□□ -0.79
PKD1-222ENST00000496574 ODF3L2Q3SX64 289 aa10.14□□□□□ -0.79
PKD1-222ENST00000496574 MRPL55Q7Z7F7 128 aaKnown RBP10.14□□□□□ -0.79
PKD1-222ENST00000496574 ZNF73O43830 326 aaPredicted RBP10.13□□□□□ -0.79
PKD1-222ENST00000496574 JMJD1CQ15652 2540 aa10.13□□□□□ -0.79
PKD1-222ENST00000496574 SOSTDC1Q6X4U4 206 aa10.13□□□□□ -0.79
PKD1-222ENST00000496574 MUC7Q8TAX7 377 aa10.13□□□□□ -0.79
PKD1-222ENST00000496574 FAM19A4Q96LR4 140 aa10.13□□□□□ -0.79
PKD1-222ENST00000496574 LAMA2P24043 3122 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms