RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 F8W036 122 aa4.18□□□□□ -1.74
CHCHD3-206ENST00000496427 ARPC5O15511 151 aa4.18□□□□□ -1.74
CHCHD3-206ENST00000496427 BCL2L11O43521 198 aa4.18□□□□□ -1.74
CHCHD3-206ENST00000496427 SUMO2P61956 95 aaKnown RBP4.18□□□□□ -1.74
CHCHD3-206ENST00000496427 RPL18AQ02543 176 aaKnown RBP4.18□□□□□ -1.74
CHCHD3-206ENST00000496427 PKIGQ9Y2B9 76 aa4.18□□□□□ -1.74
CHCHD3-206ENST00000496427 UMAD1C9J7I0 102 aa4.17□□□□□ -1.74
CHCHD3-206ENST00000496427 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.17□□□□□ -1.74
CHCHD3-206ENST00000496427 IGLV7-43P04211 117 aa4.17□□□□□ -1.74
CHCHD3-206ENST00000496427 FOXA3P55318 350 aaPredicted RBP4.17□□□□□ -1.74
CHCHD3-206ENST00000496427 RPS20P60866 119 aaKnown RBP4.17□□□□□ -1.74
CHCHD3-206ENST00000496427 MEF2BQ02080 365 aaPredicted RBP4.17□□□□□ -1.74
CHCHD3-206ENST00000496427 PEA15Q15121 130 aa4.17□□□□□ -1.74
CHCHD3-206ENST00000496427 RHEBQ15382 184 aa4.17□□□□□ -1.74
CHCHD3-206ENST00000496427 TWIST1Q15672 202 aa4.17□□□□□ -1.74
CHCHD3-206ENST00000496427 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.17□□□□□ -1.74
CHCHD3-206ENST00000496427 NUP35Q8NFH5 326 aa4.17□□□□□ -1.74
CHCHD3-206ENST00000496427 MBD3L1Q8WWY6 194 aa4.17□□□□□ -1.74
CHCHD3-206ENST00000496427 OPRPNQ99935 248 aaPredicted RBP4.17□□□□□ -1.74
CHCHD3-206ENST00000496427 TMEM242Q9NWH2 141 aa4.17□□□□□ -1.74
CHCHD3-206ENST00000496427 A0A0U1RQV1 116 aa4.16□□□□□ -1.74
CHCHD3-206ENST00000496427 FAM168BA1KXE4 195 aa4.16□□□□□ -1.74
CHCHD3-206ENST00000496427 SDHAF1A6NFY7 115 aa4.16□□□□□ -1.74
CHCHD3-206ENST00000496427 HSBP1L1C9JCN9 74 aa4.16□□□□□ -1.74
CHCHD3-206ENST00000496427 H0Y9J4 135 aa4.16□□□□□ -1.74
CHCHD3-206ENST00000496427 NCR2O95944 276 aa4.16□□□□□ -1.74
CHCHD3-206ENST00000496427 IFNA1P01562 189 aa4.16□□□□□ -1.74
CHCHD3-206ENST00000496427 KRTAP1-4P0C5Y4 121 aa4.16□□□□□ -1.74
CHCHD3-206ENST00000496427 CTRLP40313 264 aa4.16□□□□□ -1.74
CHCHD3-206ENST00000496427 CCL20P78556 96 aa4.16□□□□□ -1.74
CHCHD3-206ENST00000496427 RNASE13Q5GAN3 156 aaKnown RBP4.16□□□□□ -1.74
CHCHD3-206ENST00000496427 MRPL52Q86TS9 123 aaKnown RBP4.16□□□□□ -1.74
CHCHD3-206ENST00000496427 DIRC1Q969H9 104 aa4.16□□□□□ -1.74
CHCHD3-206ENST00000496427 C11orf52Q96A22 123 aa4.16□□□□□ -1.74
CHCHD3-206ENST00000496427 TMEM101Q96IK0 257 aa4.16□□□□□ -1.74
CHCHD3-206ENST00000496427 CAMK2N2Q96S95 79 aa4.16□□□□□ -1.74
CHCHD3-206ENST00000496427 GNG13Q9P2W3 67 aa4.16□□□□□ -1.74
CHCHD3-206ENST00000496427 TRBV20OR9-2A0A075B6H5 130 aa4.15□□□□□ -1.75
CHCHD3-206ENST00000496427 C1orf196B1AJZ1 125 aa4.15□□□□□ -1.75
CHCHD3-206ENST00000496427 F2Z2F3 143 aa4.15□□□□□ -1.75
CHCHD3-206ENST00000496427 H7C423 109 aa4.15□□□□□ -1.75
CHCHD3-206ENST00000496427 APOMO95445 188 aa4.15□□□□□ -1.75
CHCHD3-206ENST00000496427 TSHBP01222 138 aa4.15□□□□□ -1.75
CHCHD3-206ENST00000496427 ZNF25P17030 456 aaPredicted RBP4.15□□□□□ -1.75
CHCHD3-206ENST00000496427 PMCHP20382 165 aa4.15□□□□□ -1.75
CHCHD3-206ENST00000496427 SS18Q15532 418 aa4.15□□□□□ -1.75
CHCHD3-206ENST00000496427 CD164L2Q6UWJ8 174 aa4.15□□□□□ -1.75
CHCHD3-206ENST00000496427 A0A087WZ39 114 aa4.14□□□□□ -1.75
CHCHD3-206ENST00000496427 APOC3P02656 99 aa4.14□□□□□ -1.75
CHCHD3-206ENST00000496427 ESDP10768 282 aa4.14□□□□□ -1.75
CHCHD3-206ENST00000496427 GNG4P50150 75 aa4.14□□□□□ -1.75
CHCHD3-206ENST00000496427 UBE2D1P51668 147 aa4.14□□□□□ -1.75
CHCHD3-206ENST00000496427 PNRC1Q12796 327 aaPredicted RBP4.14□□□□□ -1.75
CHCHD3-206ENST00000496427 UBE2V1Q13404 147 aa4.14□□□□□ -1.75
CHCHD3-206ENST00000496427 FAM19A5Q7Z5A7 132 aaPredicted RBP4.14□□□□□ -1.75
CHCHD3-206ENST00000496427 C5orf38Q86SI9 138 aa4.14□□□□□ -1.75
CHCHD3-206ENST00000496427 ISOC2Q96AB3 205 aa4.14□□□□□ -1.75
CHCHD3-206ENST00000496427 ALKBH7Q9BT30 221 aaPredicted RBP4.14□□□□□ -1.75
CHCHD3-206ENST00000496427 RNASE7Q9H1E1 156 aaKnown RBP4.14□□□□□ -1.75
CHCHD3-206ENST00000496427 CDC42SE2Q9NRR3 84 aa4.14□□□□□ -1.75
CHCHD3-206ENST00000496427 IGLV1-50A0A075B6I6 118 aa4.13□□□□□ -1.75
CHCHD3-206ENST00000496427 I3L3M4 83 aa4.13□□□□□ -1.75
CHCHD3-206ENST00000496427 COX7A2LO14548 114 aa4.13□□□□□ -1.75
CHCHD3-206ENST00000496427 TSPAN13O95857 204 aa4.13□□□□□ -1.75
CHCHD3-206ENST00000496427 SNRPEP62304 92 aaKnown RBP4.13□□□□□ -1.75
CHCHD3-206ENST00000496427 SPAG11BQ08648 103 aa4.13□□□□□ -1.75
CHCHD3-206ENST00000496427 MRAP2Q96G30 205 aa4.13□□□□□ -1.75
CHCHD3-206ENST00000496427 CNFNQ9BYD5 112 aa4.13□□□□□ -1.75
CHCHD3-206ENST00000496427 MANBALQ9NQG1 85 aa4.13□□□□□ -1.75
CHCHD3-206ENST00000496427 TRAV13-1A0A0B4J241 112 aa4.12□□□□□ -1.75
CHCHD3-206ENST00000496427 K7EN84 100 aa4.12□□□□□ -1.75
CHCHD3-206ENST00000496427 Q6ZUT4 128 aa4.12□□□□□ -1.75
CHCHD3-206ENST00000496427 KRTAP7-1Q8IUC3 87 aa4.12□□□□□ -1.75
CHCHD3-206ENST00000496427 C2orf48Q96LS8 159 aa4.12□□□□□ -1.75
CHCHD3-206ENST00000496427 RPP21Q9H633 154 aaKnown RBP4.12□□□□□ -1.75
CHCHD3-206ENST00000496427 TRAV1-1A0A0B4J248 108 aa4.11□□□□□ -1.75
CHCHD3-206ENST00000496427 TRBV6-5A0A0K0K1A5 114 aa4.11□□□□□ -1.75
CHCHD3-206ENST00000496427 C7orf77A4D0Y5 90 aa4.11□□□□□ -1.75
CHCHD3-206ENST00000496427 SMKR1H3BMG3 65 aa4.11□□□□□ -1.75
CHCHD3-206ENST00000496427 RAB4AP20338 218 aa4.11□□□□□ -1.75
CHCHD3-206ENST00000496427 FAM74A3Q4VXF1 159 aa4.11□□□□□ -1.75
CHCHD3-206ENST00000496427 C10orf25Q5T742 122 aa4.11□□□□□ -1.75
CHCHD3-206ENST00000496427 SMIM15Q7Z3B0 74 aa4.11□□□□□ -1.75
CHCHD3-206ENST00000496427 SMIM12Q96EX1 92 aa4.11□□□□□ -1.75
CHCHD3-206ENST00000496427 C12orf57Q99622 126 aa4.11□□□□□ -1.75
CHCHD3-206ENST00000496427 ST20Q9HBF5 79 aa4.11□□□□□ -1.75
CHCHD3-206ENST00000496427 M0QXV9 152 aa4.1□□□□□ -1.75
CHCHD3-206ENST00000496427 HERV-K104P63124 156 aa4.1□□□□□ -1.75
CHCHD3-206ENST00000496427 UBE2BP63146 152 aa4.1□□□□□ -1.75
CHCHD3-206ENST00000496427 GAGE2EQ4V326 116 aa4.1□□□□□ -1.75
CHCHD3-206ENST00000496427 ALKAL2Q6UX46 152 aa4.1□□□□□ -1.75
CHCHD3-206ENST00000496427 ORAOV1Q8WV07 137 aa4.1□□□□□ -1.75
CHCHD3-206ENST00000496427 GAGE2DQ9UEU5 116 aa4.1□□□□□ -1.75
CHCHD3-206ENST00000496427 UBE2D4Q9Y2X8 147 aa4.1□□□□□ -1.75
CHCHD3-206ENST00000496427 S100A2P29034 98 aa4.09□□□□□ -1.75
CHCHD3-206ENST00000496427 RPL13AP40429 203 aaKnown RBP4.09□□□□□ -1.75
CHCHD3-206ENST00000496427 POLR2KP53803 58 aaKnown RBP4.09□□□□□ -1.75
CHCHD3-206ENST00000496427 SEC61GP60059 68 aa4.09□□□□□ -1.75
CHCHD3-206ENST00000496427 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
CHCHD3-206ENST00000496427 UNQ6190/PRO20217Q6UXQ8 127 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms