RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 COPS9Q8WXC6 57 aa7.83□□□□□ -1.16
CMSS1-208ENST00000496116 Q9H8V8 135 aa7.83□□□□□ -1.16
CMSS1-208ENST00000496116 TRBV30A0A0K0K1B3 111 aa7.82□□□□□ -1.16
CMSS1-208ENST00000496116 CRLF1O75462 422 aa7.82□□□□□ -1.16
CMSS1-208ENST00000496116 SMCPP49901 116 aaPredicted RBP7.82□□□□□ -1.16
CMSS1-208ENST00000496116 TRBV6-8A0A0A6YYG3 113 aa7.82□□□□□ -1.16
CMSS1-208ENST00000496116 SMIM9A6NGZ8 99 aa7.82□□□□□ -1.16
CMSS1-208ENST00000496116 NPC2P61916 151 aa7.82□□□□□ -1.16
CMSS1-208ENST00000496116 INAFM1C9JVW0 142 aa7.81□□□□□ -1.16
CMSS1-208ENST00000496116 DEFB130BP0DP73 79 aa7.81□□□□□ -1.16
CMSS1-208ENST00000496116 DEFB130AP0DP74 79 aa7.81□□□□□ -1.16
CMSS1-208ENST00000496116 HERV-K104P63124 156 aa7.81□□□□□ -1.16
CMSS1-208ENST00000496116 FOXI1Q12951 378 aa7.81□□□□□ -1.16
CMSS1-208ENST00000496116 ATXN8Q156A1 80 aa7.81□□□□□ -1.16
CMSS1-208ENST00000496116 NIPBLQ6KC79 2804 aaeCLIP7.81□□□□□ -1.16
CMSS1-208ENST00000496116 COX6CP09669 75 aa7.81□□□□□ -1.16
CMSS1-208ENST00000496116 GAGE6Q13070 117 aa7.81□□□□□ -1.16
CMSS1-208ENST00000496116 TEN1Q86WV5 123 aa7.81□□□□□ -1.16
CMSS1-208ENST00000496116 F5H768 121 aa7.8□□□□□ -1.16
CMSS1-208ENST00000496116 PRIMA1Q86XR5 153 aa7.8□□□□□ -1.16
CMSS1-208ENST00000496116 LINC00612Q8N6U2 182 aa7.8□□□□□ -1.16
CMSS1-208ENST00000496116 CHCHD5Q9BSY4 110 aa7.8□□□□□ -1.16
CMSS1-208ENST00000496116 GAGE12HA6NDE8 117 aa7.79□□□□□ -1.16
CMSS1-208ENST00000496116 MEIG1Q5JSS6 88 aa7.79□□□□□ -1.16
CMSS1-208ENST00000496116 DAND5Q8N907 189 aa7.79□□□□□ -1.16
CMSS1-208ENST00000496116 ICOSQ9Y6W8 199 aa7.79□□□□□ -1.16
CMSS1-208ENST00000496116 M0QXV9 152 aa7.79□□□□□ -1.16
CMSS1-208ENST00000496116 TRIAP1O43715 76 aa7.79□□□□□ -1.16
CMSS1-208ENST00000496116 SLC25A20O43772 301 aa7.79□□□□□ -1.16
CMSS1-208ENST00000496116 LINC00308Q8TCZ7 52 aa7.79□□□□□ -1.16
CMSS1-208ENST00000496116 PPDPFLQ8WWR9 84 aa7.79□□□□□ -1.16
CMSS1-208ENST00000496116 ZNF625Q96I27 306 aaPredicted RBP7.79□□□□□ -1.16
CMSS1-208ENST00000496116 SPATA25Q9BR10 227 aa7.79□□□□□ -1.16
CMSS1-208ENST00000496116 X6R8D5 127 aa7.79□□□□□ -1.16
CMSS1-208ENST00000496116 C9JAW5 83 aa7.78□□□□□ -1.16
CMSS1-208ENST00000496116 SIGMAR1Q99720 223 aa7.78□□□□□ -1.16
CMSS1-208ENST00000496116 LYRM9A8MSI8 78 aa7.77□□□□□ -1.17
CMSS1-208ENST00000496116 GYPEP15421 78 aa7.77□□□□□ -1.17
CMSS1-208ENST00000496116 RPL13AP40429 203 aaKnown RBP7.77□□□□□ -1.17
CMSS1-208ENST00000496116 PRO0255Q9UI72 69 aa7.77□□□□□ -1.17
CMSS1-208ENST00000496116 C2CD3Q4AC94 2353 aa7.77□□□□□ -1.17
CMSS1-208ENST00000496116 IGLV4-60A0A075B6I1 120 aa7.76□□□□□ -1.17
CMSS1-208ENST00000496116 IGKV3OR2-268A0A0C4DH90 116 aa7.76□□□□□ -1.17
CMSS1-208ENST00000496116 A0A0U1RRA0 63 aa7.76□□□□□ -1.17
CMSS1-208ENST00000496116 APOC4P55056 127 aa7.76□□□□□ -1.17
CMSS1-208ENST00000496116 LINC01620Q4KN68 170 aa7.76□□□□□ -1.17
CMSS1-208ENST00000496116 ANKRD29Q8N6D5 301 aa7.76□□□□□ -1.17
CMSS1-208ENST00000496116 COX7B2Q8TF08 81 aa7.76□□□□□ -1.17
CMSS1-208ENST00000496116 PPDPFQ9H3Y8 114 aa7.76□□□□□ -1.17
CMSS1-208ENST00000496116 GCN1Q92616 2671 aaKnown RBP7.75□□□□□ -1.17
CMSS1-208ENST00000496116 FAM222AQ5U5X8 452 aa7.75□□□□□ -1.17
CMSS1-208ENST00000496116 FN1P02751 2386 aaKnown RBP7.74□□□□□ -1.17
CMSS1-208ENST00000496116 IGHV3OR16-9A0A0B4J2B5 98 aa7.74□□□□□ -1.17
CMSS1-208ENST00000496116 TRBV10-2A0A0K0K1G8 114 aa7.74□□□□□ -1.17
CMSS1-208ENST00000496116 SCGB1A1P11684 91 aa7.74□□□□□ -1.17
CMSS1-208ENST00000496116 CITED1Q99966 193 aa7.74□□□□□ -1.17
CMSS1-208ENST00000496116 TOMM7Q9P0U1 55 aa7.74□□□□□ -1.17
CMSS1-208ENST00000496116 HECTD1Q9ULT8 2610 aa7.74□□□□□ -1.17
CMSS1-208ENST00000496116 A0A087WZ39 114 aa7.73□□□□□ -1.17
CMSS1-208ENST00000496116 A0A1B0GUV1 79 aa7.73□□□□□ -1.17
CMSS1-208ENST00000496116 TMEM262E9PQX1 116 aa7.73□□□□□ -1.17
CMSS1-208ENST00000496116 DEFB135Q30KP9 77 aa7.73□□□□□ -1.17
CMSS1-208ENST00000496116 SPATA3Q8NHX4 192 aa7.73□□□□□ -1.17
CMSS1-208ENST00000496116 CARD19Q96LW7 228 aa7.73□□□□□ -1.17
CMSS1-208ENST00000496116 LINC01600Q96MT4 127 aa7.73□□□□□ -1.17
CMSS1-208ENST00000496116 LINC00959A0A1B0GUT2 108 aa7.72□□□□□ -1.17
CMSS1-208ENST00000496116 PAX4O43316 350 aa7.72□□□□□ -1.17
CMSS1-208ENST00000496116 SOSTDC1Q6X4U4 206 aa7.72□□□□□ -1.17
CMSS1-208ENST00000496116 LST1O00453 97 aa7.72□□□□□ -1.17
CMSS1-208ENST00000496116 SS18Q15532 418 aa7.72□□□□□ -1.17
CMSS1-208ENST00000496116 NOTCH2Q04721 2471 aa7.71□□□□□ -1.17
CMSS1-208ENST00000496116 OTOGQ6ZRI0 2925 aa7.71□□□□□ -1.18
CMSS1-208ENST00000496116 H3BT86 120 aa7.7□□□□□ -1.18
CMSS1-208ENST00000496116 DAD1P61803 113 aa7.7□□□□□ -1.18
CMSS1-208ENST00000496116 C2orf82Q6UX34 121 aa7.7□□□□□ -1.18
CMSS1-208ENST00000496116 CLEC2BQ92478 149 aa7.7□□□□□ -1.18
CMSS1-208ENST00000496116 NSD1Q96L73 2696 aaPredicted RBP7.7□□□□□ -1.18
CMSS1-208ENST00000496116 IGHV4-28A0A0C4DH34 117 aa7.7□□□□□ -1.18
CMSS1-208ENST00000496116 MIFP14174 115 aa7.7□□□□□ -1.18
CMSS1-208ENST00000496116 C5orf38Q86SI9 138 aa7.7□□□□□ -1.18
CMSS1-208ENST00000496116 MIR7-3HGQ8N6C7 128 aa7.7□□□□□ -1.18
CMSS1-208ENST00000496116 CDIP1Q9H305 208 aa7.7□□□□□ -1.18
CMSS1-208ENST00000496116 A0A096LPF7 62 aa7.69□□□□□ -1.18
CMSS1-208ENST00000496116 TRAV13-2A0A0B4J235 113 aa7.69□□□□□ -1.18
CMSS1-208ENST00000496116 IBA57-AS1B1ANH7 110 aa7.69□□□□□ -1.18
CMSS1-208ENST00000496116 COX7A2LO14548 114 aa7.69□□□□□ -1.18
CMSS1-208ENST00000496116 NTN5Q8WTR8 489 aaPredicted RBP7.69□□□□□ -1.18
CMSS1-208ENST00000496116 DEFB4AO15263 64 aa7.69□□□□□ -1.18
CMSS1-208ENST00000496116 ATP5G1P05496 136 aa7.69□□□□□ -1.18
CMSS1-208ENST00000496116 LINC00158P58513 81 aa7.69□□□□□ -1.18
CMSS1-208ENST00000496116 SHISA2Q6UWI4 295 aa7.69□□□□□ -1.18
CMSS1-208ENST00000496116 WFDC9Q8NEX5 89 aa7.69□□□□□ -1.18
CMSS1-208ENST00000496116 XCL1P47992 114 aa7.68□□□□□ -1.18
CMSS1-208ENST00000496116 C6orf226Q5I0X4 101 aa7.68□□□□□ -1.18
CMSS1-208ENST00000496116 UBE2WQ96B02 151 aa7.68□□□□□ -1.18
CMSS1-208ENST00000496116 CRPP02741 224 aa7.67□□□□□ -1.18
CMSS1-208ENST00000496116 LINC01561Q8N1V8 128 aa7.67□□□□□ -1.18
CMSS1-208ENST00000496116 SND1-IT1Q9HBX3 110 aa7.67□□□□□ -1.18
CMSS1-208ENST00000496116 TRAV26-1A0A087WT03 109 aa7.67□□□□□ -1.18
CMSS1-208ENST00000496116 WIPF1O43516 503 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms