RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 MAP1LC3AQ9H492 121 aa10.9□□□□□ -0.66
CTNS-207ENST00000495445 TRAV9-1A0A075B6T8 112 aa10.89□□□□□ -0.67
CTNS-207ENST00000495445 MAJINQ3KP22 176 aa10.89□□□□□ -0.67
CTNS-207ENST00000495445 C10orf91Q5T1B1 145 aa10.89□□□□□ -0.67
CTNS-207ENST00000495445 IGLV4-3A0A075B6K6 122 aa10.88□□□□□ -0.67
CTNS-207ENST00000495445 IGKV2-24A0A0C4DH68 120 aa10.88□□□□□ -0.67
CTNS-207ENST00000495445 LINC00474Q9P2X8 69 aa10.88□□□□□ -0.67
CTNS-207ENST00000495445 PKIGQ9Y2B9 76 aa10.88□□□□□ -0.67
CTNS-207ENST00000495445 K7EMI3 77 aa10.87□□□□□ -0.67
CTNS-207ENST00000495445 APOMO95445 188 aa10.87□□□□□ -0.67
CTNS-207ENST00000495445 OXTP01178 125 aa10.87□□□□□ -0.67
CTNS-207ENST00000495445 IFI27P40305 119 aaPredicted RBP10.87□□□□□ -0.67
CTNS-207ENST00000495445 Q6ZRU5 148 aa10.87□□□□□ -0.67
CTNS-207ENST00000495445 IFITM10A6NMD0 228 aa10.86□□□□□ -0.67
CTNS-207ENST00000495445 J3QL48 77 aa10.86□□□□□ -0.67
CTNS-207ENST00000495445 STPG4Q8N801 248 aa10.86□□□□□ -0.67
CTNS-207ENST00000495445 OR10D4PQ8NGN7 298 aa10.86□□□□□ -0.67
CTNS-207ENST00000495445 RNF151Q2KHN1 245 aa10.85□□□□□ -0.67
CTNS-207ENST00000495445 ORMDL2Q53FV1 153 aa10.85□□□□□ -0.67
CTNS-207ENST00000495445 COMMD7Q86VX2 200 aa10.85□□□□□ -0.67
CTNS-207ENST00000495445 TMEM141Q96I45 108 aa10.85□□□□□ -0.67
CTNS-207ENST00000495445 F8WDY8 70 aa10.84□□□□□ -0.67
CTNS-207ENST00000495445 NPSP0C0P6 89 aa10.84□□□□□ -0.67
CTNS-207ENST00000495445 LINC00242Q5T6M2 205 aa10.84□□□□□ -0.67
CTNS-207ENST00000495445 C2orf66Q6UXQ4 117 aa10.84□□□□□ -0.67
CTNS-207ENST00000495445 CAMK2N2Q96S95 79 aa10.84□□□□□ -0.67
CTNS-207ENST00000495445 AMELXQ99217 191 aa10.84□□□□□ -0.67
CTNS-207ENST00000495445 NXT2Q9NPJ8 142 aaKnown RBP10.84□□□□□ -0.67
CTNS-207ENST00000495445 CYSLTR1Q9Y271 337 aa10.84□□□□□ -0.67
CTNS-207ENST00000495445 LOC107984640A0A0U1RRK4 108 aa10.83□□□□□ -0.68
CTNS-207ENST00000495445 IGIPA6NJ69 53 aa10.83□□□□□ -0.68
CTNS-207ENST00000495445 PTTG1IPP53801 180 aa10.83□□□□□ -0.68
CTNS-207ENST00000495445 GNB1LQ9BYB4 327 aa10.83□□□□□ -0.68
CTNS-207ENST00000495445 A0A087WZ39 114 aa10.82□□□□□ -0.68
CTNS-207ENST00000495445 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.82□□□□□ -0.68
CTNS-207ENST00000495445 UBE2D1P51668 147 aa10.82□□□□□ -0.68
CTNS-207ENST00000495445 SPAG11BQ08648 103 aa10.82□□□□□ -0.68
CTNS-207ENST00000495445 KIAA1644Q3SXP7 199 aa10.82□□□□□ -0.68
CTNS-207ENST00000495445 LINC00173Q6ZV60 143 aa10.82□□□□□ -0.68
CTNS-207ENST00000495445 C7orf33Q8WU49 177 aa10.82□□□□□ -0.68
CTNS-207ENST00000495445 CARHSP1Q9Y2V2 147 aaKnown RBP10.82□□□□□ -0.68
CTNS-207ENST00000495445 TNXBP22105 4242 aa10.81□□□□□ -0.68
CTNS-207ENST00000495445 KIAA0087Q14695 138 aa10.81□□□□□ -0.68
CTNS-207ENST00000495445 TEX43Q6ZNM6 134 aa10.81□□□□□ -0.68
CTNS-207ENST00000495445 FAM19A3Q7Z5A8 133 aa10.81□□□□□ -0.68
CTNS-207ENST00000495445 ORAOV1Q8WV07 137 aa10.81□□□□□ -0.68
CTNS-207ENST00000495445 LINC01546A6NGU7 62 aa10.8□□□□□ -0.68
CTNS-207ENST00000495445 ZC2HC1BQ5TFG8 222 aa10.8□□□□□ -0.68
CTNS-207ENST00000495445 LINC01561Q8N1V8 128 aa10.8□□□□□ -0.68
CTNS-207ENST00000495445 MRPL35Q9NZE8 188 aaKnown RBP10.8□□□□□ -0.68
CTNS-207ENST00000495445 TGIF2-C20orf24A0A0A6YYL0 155 aa10.79□□□□□ -0.68
CTNS-207ENST00000495445 S100PP25815 95 aa10.79□□□□□ -0.68
CTNS-207ENST00000495445 G0S2P27469 103 aa10.79□□□□□ -0.68
CTNS-207ENST00000495445 GAGE2BQ13066 116 aa10.79□□□□□ -0.68
CTNS-207ENST00000495445 TOMM6Q96B49 74 aa10.79□□□□□ -0.68
CTNS-207ENST00000495445 VCX2Q9H322 139 aa10.79□□□□□ -0.68
CTNS-207ENST00000495445 A0A1W2PNN7 141 aa10.78□□□□□ -0.68
CTNS-207ENST00000495445 RHEBQ15382 184 aa10.78□□□□□ -0.68
CTNS-207ENST00000495445 COX19Q49B96 90 aa10.78□□□□□ -0.68
CTNS-207ENST00000495445 C10orf25Q5T742 122 aa10.78□□□□□ -0.68
CTNS-207ENST00000495445 ALKBH7Q9BT30 221 aaPredicted RBP10.78□□□□□ -0.68
CTNS-207ENST00000495445 A0A0J9YXV3 536 aa10.77□□□□□ -0.69
CTNS-207ENST00000495445 TLX1NBP0CAT3 122 aa10.77□□□□□ -0.69
CTNS-207ENST00000495445 Q6ZN92 141 aa10.77□□□□□ -0.69
CTNS-207ENST00000495445 TIMM17AQ99595 171 aa10.77□□□□□ -0.69
CTNS-207ENST00000495445 C2orf88Q9BSF0 95 aa10.77□□□□□ -0.69
CTNS-207ENST00000495445 NDUFA1O15239 70 aa10.76□□□□□ -0.69
CTNS-207ENST00000495445 PRR3P79522 188 aaKnown RBP10.76□□□□□ -0.69
CTNS-207ENST00000495445 UNQ6190/PRO20217Q6UXQ8 127 aa10.76□□□□□ -0.69
CTNS-207ENST00000495445 RPS10P5Q9NQ39 176 aa10.75□□□□□ -0.69
CTNS-207ENST00000495445 MT-ND6P03923 174 aa10.74□□□□□ -0.69
CTNS-207ENST00000495445 PAPPA-AS1Q5QFB9 102 aa10.74□□□□□ -0.69
CTNS-207ENST00000495445 ERASQ7Z444 233 aa10.74□□□□□ -0.69
CTNS-207ENST00000495445 C6orf48Q9UBA6 75 aa10.74□□□□□ -0.69
CTNS-207ENST00000495445 MT1HL1P0DM35 61 aa10.73□□□□□ -0.69
CTNS-207ENST00000495445 C9orf116Q5BN46 136 aaPredicted RBP10.73□□□□□ -0.69
CTNS-207ENST00000495445 RPL18AQ02543 176 aaKnown RBP10.72□□□□□ -0.69
CTNS-207ENST00000495445 SRSF9Q13242 221 aaKnown RBP eCLIP10.72□□□□□ -0.69
CTNS-207ENST00000495445 Q6ZRP5 223 aa10.72□□□□□ -0.69
CTNS-207ENST00000495445 MRPL18Q9H0U6 180 aaKnown RBP10.72□□□□□ -0.69
CTNS-207ENST00000495445 HMCN2Q8NDA2 5059 aa10.72□□□□□ -0.69
CTNS-207ENST00000495445 TRBV30A0A0K0K1B3 111 aa10.71□□□□□ -0.69
CTNS-207ENST00000495445 LINC01549A6NIU2 74 aa10.71□□□□□ -0.69
CTNS-207ENST00000495445 FABP9Q0Z7S8 132 aa10.71□□□□□ -0.69
CTNS-207ENST00000495445 SCGB3A1Q96QR1 104 aa10.71□□□□□ -0.69
CTNS-207ENST00000495445 HERVK_113P63121 156 aa10.7□□□□□ -0.7
CTNS-207ENST00000495445 SEC11AP67812 179 aa10.7□□□□□ -0.7
CTNS-207ENST00000495445 C2orf82Q6UX34 121 aa10.7□□□□□ -0.7
CTNS-207ENST00000495445 CDKN2A-AS1Q9UH64 79 aa10.69□□□□□ -0.7
CTNS-207ENST00000495445 SERTAD4-AS1Q5TG53 156 aa10.68□□□□□ -0.7
CTNS-207ENST00000495445 Q8IZM0 81 aa10.68□□□□□ -0.7
CTNS-207ENST00000495445 APOC3P02656 99 aa10.67□□□□□ -0.7
CTNS-207ENST00000495445 SPINK6Q6UWN8 80 aa10.67□□□□□ -0.7
CTNS-207ENST00000495445 TINCRA0A1B0GVN0 87 aa10.66□□□□□ -0.7
CTNS-207ENST00000495445 NDUFC2-KCTD14E9PQ53 114 aa10.66□□□□□ -0.7
CTNS-207ENST00000495445 PHF5AQ7RTV0 110 aaKnown RBP10.66□□□□□ -0.7
CTNS-207ENST00000495445 KRTAP7-1Q8IUC3 87 aa10.66□□□□□ -0.7
CTNS-207ENST00000495445 SVBPQ8N300 66 aa10.66□□□□□ -0.7
CTNS-207ENST00000495445 URB1-AS1Q96HZ7 61 aa10.66□□□□□ -0.7
CTNS-207ENST00000495445 CST9LQ9H4G1 147 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms