RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 CSAG1Q6PB30 78 aa0.28□□□□□ -2.36
ITGB1-216ENST00000493758 SMIM15Q7Z3B0 74 aa0.28□□□□□ -2.36
ITGB1-216ENST00000493758 OR51A4Q8NGJ6 313 aa0.28□□□□□ -2.36
ITGB1-216ENST00000493758 BRK1Q8WUW1 75 aa0.28□□□□□ -2.36
ITGB1-216ENST00000493758 SKA2Q8WVK7 121 aaPredicted RBP0.28□□□□□ -2.36
ITGB1-216ENST00000493758 SMIM7Q9BQ49 75 aa0.28□□□□□ -2.36
ITGB1-216ENST00000493758 CBLN4Q9NTU7 201 aa0.28□□□□□ -2.36
ITGB1-216ENST00000493758 MRPL35Q9NZE8 188 aaKnown RBP0.28□□□□□ -2.36
ITGB1-216ENST00000493758 MRPL36Q9P0J6 103 aaKnown RBP0.28□□□□□ -2.36
ITGB1-216ENST00000493758 SMPXQ9UHP9 88 aa0.28□□□□□ -2.36
ITGB1-216ENST00000493758 PDCD11Q14690 1871 aaKnown RBP0.28□□□□□ -2.36
ITGB1-216ENST00000493758 DNAJC13O75165 2243 aa0.28□□□□□ -2.37
ITGB1-216ENST00000493758 NUP210Q8TEM1 1887 aaPredicted RBP0.27□□□□□ -2.37
ITGB1-216ENST00000493758 M0QZK8 103 aa0.27□□□□□ -2.37
ITGB1-216ENST00000493758 IGF2P01344 180 aa0.27□□□□□ -2.37
ITGB1-216ENST00000493758 HBDP02042 147 aa0.27□□□□□ -2.37
ITGB1-216ENST00000493758 RPL7P18124 248 aaKnown RBP0.27□□□□□ -2.37
ITGB1-216ENST00000493758 SPRR2DP22532 72 aa0.27□□□□□ -2.37
ITGB1-216ENST00000493758 CKS2P33552 79 aa0.27□□□□□ -2.37
ITGB1-216ENST00000493758 RPL22P35268 128 aaKnown RBP0.27□□□□□ -2.37
ITGB1-216ENST00000493758 C10orf99Q6UWK7 81 aa0.27□□□□□ -2.37
ITGB1-216ENST00000493758 IDO2Q6ZQW0 420 aa0.27□□□□□ -2.37
ITGB1-216ENST00000493758 TMEM35BQ8NCS4 154 aa0.27□□□□□ -2.37
ITGB1-216ENST00000493758 OR5A2Q8NGI9 324 aa0.27□□□□□ -2.37
ITGB1-216ENST00000493758 TSKUQ8WUA8 353 aa0.27□□□□□ -2.37
ITGB1-216ENST00000493758 CCDC115Q96NT0 180 aa0.27□□□□□ -2.37
ITGB1-216ENST00000493758 DDA1Q9BW61 102 aa0.27□□□□□ -2.37
ITGB1-216ENST00000493758 DAPK1P53355 1430 aa0.27□□□□□ -2.37
ITGB1-216ENST00000493758 SPTBP11277 2137 aa0.26□□□□□ -2.37
ITGB1-216ENST00000493758 IGHV1-24A0A0C4DH33 117 aa0.26□□□□□ -2.37
ITGB1-216ENST00000493758 PNMA8CA0A1B0GUJ8 204 aa0.26□□□□□ -2.37
ITGB1-216ENST00000493758 HIGD1CA8MV81 97 aa0.26□□□□□ -2.37
ITGB1-216ENST00000493758 TSTD3H0UI37 97 aa0.26□□□□□ -2.37
ITGB1-216ENST00000493758 CDC42EP2O14613 210 aa0.26□□□□□ -2.37
ITGB1-216ENST00000493758 TPST1O60507 370 aa0.26□□□□□ -2.37
ITGB1-216ENST00000493758 PRH1P02810 166 aa0.26□□□□□ -2.37
ITGB1-216ENST00000493758 IL7P13232 177 aa0.26□□□□□ -2.37
ITGB1-216ENST00000493758 PCBD1P61457 104 aa0.26□□□□□ -2.37
ITGB1-216ENST00000493758 PSPHP78330 225 aa0.26□□□□□ -2.37
ITGB1-216ENST00000493758 RHOHQ15669 191 aa0.26□□□□□ -2.37
ITGB1-216ENST00000493758 GLYATL3Q5SZD4 288 aa0.26□□□□□ -2.37
ITGB1-216ENST00000493758 UNQ5815/PRO19632Q6UWF5 114 aa0.26□□□□□ -2.37
ITGB1-216ENST00000493758 NAT14Q8WUY8 206 aa0.26□□□□□ -2.37
ITGB1-216ENST00000493758 FAM103A1Q9BTL3 118 aaKnown RBP0.26□□□□□ -2.37
ITGB1-216ENST00000493758 COMMD3Q9UBI1 195 aa0.26□□□□□ -2.37
ITGB1-216ENST00000493758 DOCK1Q14185 1865 aa0.26□□□□□ -2.37
ITGB1-216ENST00000493758 ANKARQ7Z5J8 1434 aa0.25□□□□□ -2.37
ITGB1-216ENST00000493758 IBTKQ9P2D0 1353 aaPredicted RBP0.25□□□□□ -2.37
ITGB1-216ENST00000493758 A0A0G2JMM0 328 aa0.25□□□□□ -2.37
ITGB1-216ENST00000493758 LOC101927531A0A1B0GV80 90 aa0.25□□□□□ -2.37
ITGB1-216ENST00000493758 FXYD1O00168 92 aa0.25□□□□□ -2.37
ITGB1-216ENST00000493758 UQCRQO14949 82 aa0.25□□□□□ -2.37
ITGB1-216ENST00000493758 LY6G6CO95867 125 aa0.25□□□□□ -2.37
ITGB1-216ENST00000493758 COX6B1P14854 86 aa0.25□□□□□ -2.37
ITGB1-216ENST00000493758 FXYD3Q14802 87 aa0.25□□□□□ -2.37
ITGB1-216ENST00000493758 ZNF56Q15929 161 aa0.25□□□□□ -2.37
ITGB1-216ENST00000493758 ASB16-AS1Q495Z4 193 aa0.25□□□□□ -2.37
ITGB1-216ENST00000493758 LYPD5Q6UWN5 251 aa0.25□□□□□ -2.37
ITGB1-216ENST00000493758 C5orf56Q8N8D9 126 aa0.25□□□□□ -2.37
ITGB1-216ENST00000493758 OTOSQ8NHW6 89 aa0.25□□□□□ -2.37
ITGB1-216ENST00000493758 DMAC1Q96GE9 116 aa0.25□□□□□ -2.37
ITGB1-216ENST00000493758 LINC00208Q96KT6 92 aa0.25□□□□□ -2.37
ITGB1-216ENST00000493758 ATG5Q9H1Y0 275 aa0.25□□□□□ -2.37
ITGB1-216ENST00000493758 HSPB11Q9Y547 144 aa0.25□□□□□ -2.37
ITGB1-216ENST00000493758 MED23Q9ULK4 1368 aa0.24□□□□□ -2.37
ITGB1-216ENST00000493758 NBDYA0A0U1RRE5 68 aa0.24□□□□□ -2.37
ITGB1-216ENST00000493758 J3KT08 172 aa0.24□□□□□ -2.37
ITGB1-216ENST00000493758 DPM2O94777 84 aa0.24□□□□□ -2.37
ITGB1-216ENST00000493758 IGKCP01834 107 aa0.24□□□□□ -2.37
ITGB1-216ENST00000493758 SLC25A5P05141 298 aaKnown RBP0.24□□□□□ -2.37
ITGB1-216ENST00000493758 HIST1H1BP16401 226 aaKnown RBP0.24□□□□□ -2.37
ITGB1-216ENST00000493758 SDC4P31431 198 aa0.24□□□□□ -2.37
ITGB1-216ENST00000493758 POLR2JP52435 117 aaKnown RBP0.24□□□□□ -2.37
ITGB1-216ENST00000493758 IQCJQ1A5X6 159 aa0.24□□□□□ -2.37
ITGB1-216ENST00000493758 HSD17B12Q53GQ0 312 aa0.24□□□□□ -2.37
ITGB1-216ENST00000493758 Q5VSD8 79 aa0.24□□□□□ -2.37
ITGB1-216ENST00000493758 OR8I2Q8N0Y5 310 aa0.24□□□□□ -2.37
ITGB1-216ENST00000493758 CALML5Q9NZT1 146 aa0.24□□□□□ -2.37
ITGB1-216ENST00000493758 CCNB3Q8WWL7 1395 aa0.23□□□□□ -2.37
ITGB1-216ENST00000493758 ANK1P16157 1881 aa0.23□□□□□ -2.37
ITGB1-216ENST00000493758 GNG14A0A1W2PPG7 69 aa0.23□□□□□ -2.37
ITGB1-216ENST00000493758 APOC1P02654 83 aa0.23□□□□□ -2.37
ITGB1-216ENST00000493758 SMR3BP02814 79 aaPredicted RBP0.23□□□□□ -2.37
ITGB1-216ENST00000493758 TCRAP04437 139 aa0.23□□□□□ -2.37
ITGB1-216ENST00000493758 PAEPP09466 180 aa0.23□□□□□ -2.37
ITGB1-216ENST00000493758 MT1HL1P0DM35 61 aa0.23□□□□□ -2.37
ITGB1-216ENST00000493758 ADCYAP1P18509 176 aa0.23□□□□□ -2.37
ITGB1-216ENST00000493758 RPL37P61927 97 aaKnown RBP0.23□□□□□ -2.37
ITGB1-216ENST00000493758 RPS28P62857 69 aaKnown RBP0.23□□□□□ -2.37
ITGB1-216ENST00000493758 OR4S1Q8NGB4 309 aa0.23□□□□□ -2.37
ITGB1-216ENST00000493758 METTL1Q9UBP6 276 aaKnown RBP0.23□□□□□ -2.37
ITGB1-216ENST00000493758 GINS2Q9Y248 185 aa0.23□□□□□ -2.37
ITGB1-216ENST00000493758 NDUFAF1Q9Y375 327 aa0.23□□□□□ -2.37
ITGB1-216ENST00000493758 TANC2Q9HCD6 1990 aa0.23□□□□□ -2.37
ITGB1-216ENST00000493758 VPS8Q8N3P4 1428 aa0.22□□□□□ -2.37
ITGB1-216ENST00000493758 SPEF2Q9C093 1822 aa0.22□□□□□ -2.37
ITGB1-216ENST00000493758 ANKRD36CQ5JPF3 1778 aa0.22□□□□□ -2.37
ITGB1-216ENST00000493758 TRAV17A0A0B4J275 112 aa0.22□□□□□ -2.37
ITGB1-216ENST00000493758 TRBV10-1A0A0K0K1A3 114 aa0.22□□□□□ -2.37
ITGB1-216ENST00000493758 H0YJX3 145 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms