RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 RHEBQ15382 184 aa4.5□□□□□ -1.69
TOP3A-207ENST00000493648 ORMDL2Q53FV1 153 aa4.5□□□□□ -1.69
TOP3A-207ENST00000493648 RNASE13Q5GAN3 156 aaKnown RBP4.5□□□□□ -1.69
TOP3A-207ENST00000493648 Q6ZUT4 128 aa4.5□□□□□ -1.69
TOP3A-207ENST00000493648 SCXQ7RTU7 201 aa4.5□□□□□ -1.69
TOP3A-207ENST00000493648 GNB1LQ9BYB4 327 aa4.5□□□□□ -1.69
TOP3A-207ENST00000493648 NXT2Q9NPJ8 142 aaKnown RBP4.5□□□□□ -1.69
TOP3A-207ENST00000493648 PYGO1Q9Y3Y4 419 aa4.5□□□□□ -1.69
TOP3A-207ENST00000493648 PCLOQ9Y6V0 5065 aa4.5□□□□□ -1.69
TOP3A-207ENST00000493648 APOMO95445 188 aa4.49□□□□□ -1.69
TOP3A-207ENST00000493648 KIAA1644Q3SXP7 199 aa4.49□□□□□ -1.69
TOP3A-207ENST00000493648 CIRBP-AS1Q8TBR5 109 aa4.49□□□□□ -1.69
TOP3A-207ENST00000493648 OPRPNQ99935 248 aaPredicted RBP4.49□□□□□ -1.69
TOP3A-207ENST00000493648 CYSLTR1Q9Y271 337 aa4.49□□□□□ -1.69
TOP3A-207ENST00000493648 PKIGQ9Y2B9 76 aa4.49□□□□□ -1.69
TOP3A-207ENST00000493648 IFITM10A6NMD0 228 aa4.48□□□□□ -1.69
TOP3A-207ENST00000493648 MT-ND6P03923 174 aa4.48□□□□□ -1.69
TOP3A-207ENST00000493648 C2orf66Q6UXQ4 117 aa4.48□□□□□ -1.69
TOP3A-207ENST00000493648 C5orf38Q86SI9 138 aa4.48□□□□□ -1.69
TOP3A-207ENST00000493648 PRSS3P2Q8NHM4 247 aa4.48□□□□□ -1.69
TOP3A-207ENST00000493648 IGLV4-3A0A075B6K6 122 aa4.47□□□□□ -1.69
TOP3A-207ENST00000493648 NPSP0C0P6 89 aa4.47□□□□□ -1.69
TOP3A-207ENST00000493648 COX6A2Q02221 97 aa4.47□□□□□ -1.69
TOP3A-207ENST00000493648 SYCNQ0VAF6 134 aa4.47□□□□□ -1.69
TOP3A-207ENST00000493648 FABP9Q0Z7S8 132 aa4.47□□□□□ -1.69
TOP3A-207ENST00000493648 Q6ZN92 141 aa4.47□□□□□ -1.69
TOP3A-207ENST00000493648 TEX43Q6ZNM6 134 aa4.47□□□□□ -1.69
TOP3A-207ENST00000493648 FAM104AQ969W3 186 aa4.47□□□□□ -1.69
TOP3A-207ENST00000493648 TMEM141Q96I45 108 aa4.47□□□□□ -1.69
TOP3A-207ENST00000493648 CARD19Q96LW7 228 aa4.47□□□□□ -1.69
TOP3A-207ENST00000493648 C2orf88Q9BSF0 95 aa4.47□□□□□ -1.69
TOP3A-207ENST00000493648 MRPL18Q9H0U6 180 aaKnown RBP4.47□□□□□ -1.69
TOP3A-207ENST00000493648 VCX2Q9H322 139 aa4.47□□□□□ -1.69
TOP3A-207ENST00000493648 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.47□□□□□ -1.69
TOP3A-207ENST00000493648 IGLV4-69A0A075B6H9 119 aa4.46□□□□□ -1.7
TOP3A-207ENST00000493648 TGIF2-C20orf24A0A0A6YYL0 155 aa4.46□□□□□ -1.7
TOP3A-207ENST00000493648 LINC01549A6NIU2 74 aa4.46□□□□□ -1.7
TOP3A-207ENST00000493648 SCO1O75880 301 aa4.46□□□□□ -1.7
TOP3A-207ENST00000493648 CIRBPQ14011 172 aaKnown RBP4.46□□□□□ -1.7
TOP3A-207ENST00000493648 PAPPA-AS1Q5QFB9 102 aa4.46□□□□□ -1.7
TOP3A-207ENST00000493648 LINC00526Q96FQ7 95 aa4.46□□□□□ -1.7
TOP3A-207ENST00000493648 C2orf48Q96LS8 159 aa4.46□□□□□ -1.7
TOP3A-207ENST00000493648 CAMK2N2Q96S95 79 aa4.46□□□□□ -1.7
TOP3A-207ENST00000493648 ALKBH7Q9BT30 221 aaPredicted RBP4.46□□□□□ -1.7
TOP3A-207ENST00000493648 SMCO4Q9NRQ5 59 aa4.46□□□□□ -1.7
TOP3A-207ENST00000493648 LINC00474Q9P2X8 69 aa4.46□□□□□ -1.7
TOP3A-207ENST00000493648 DNAH8Q96JB1 4490 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 A0A087WYN8 130 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 IGHV3OR16-9A0A0B4J2B5 98 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 IGIPA6NJ69 53 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 F8WDY8 70 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 PANO1I0J062 215 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 CHTF8P0CG12 524 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 SPAG11BQ08648 103 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 MAJINQ3KP22 176 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 LINC00242Q5T6M2 205 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 FA2HQ7L5A8 372 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 CBLN2Q8IUK8 224 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 OR10D4PQ8NGN7 298 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 SPACA4Q8TDM5 124 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 TOMM6Q96B49 74 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 YPEL4Q96NS1 127 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 SCGB3A1Q96QR1 104 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 TRAPPC1Q9Y5R8 145 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 ABCA13Q86UQ4 5058 aa4.45□□□□□ -1.7
TOP3A-207ENST00000493648 A0A087WZ39 114 aa4.44□□□□□ -1.7
TOP3A-207ENST00000493648 IGKV2-24A0A0C4DH68 120 aa4.44□□□□□ -1.7
TOP3A-207ENST00000493648 LOC107984640A0A0U1RRK4 108 aa4.44□□□□□ -1.7
TOP3A-207ENST00000493648 LINC01546A6NGU7 62 aa4.44□□□□□ -1.7
TOP3A-207ENST00000493648 UBE2D1P51668 147 aa4.44□□□□□ -1.7
TOP3A-207ENST00000493648 RPL37AP61513 92 aaKnown RBP4.44□□□□□ -1.7
TOP3A-207ENST00000493648 SEC11AP67812 179 aa4.44□□□□□ -1.7
TOP3A-207ENST00000493648 ERASQ7Z444 233 aa4.44□□□□□ -1.7
TOP3A-207ENST00000493648 ORAOV1Q8WV07 137 aa4.44□□□□□ -1.7
TOP3A-207ENST00000493648 AMELXQ99217 191 aa4.44□□□□□ -1.7
TOP3A-207ENST00000493648 TIMM17AQ99595 171 aa4.44□□□□□ -1.7
TOP3A-207ENST00000493648 A0A096LNI7 61 aa4.43□□□□□ -1.7
TOP3A-207ENST00000493648 COLCA2A8K830 154 aa4.43□□□□□ -1.7
TOP3A-207ENST00000493648 RNF151Q2KHN1 245 aa4.43□□□□□ -1.7
TOP3A-207ENST00000493648 ZC2HC1BQ5TFG8 222 aa4.43□□□□□ -1.7
TOP3A-207ENST00000493648 Q6ZRU5 148 aa4.43□□□□□ -1.7
TOP3A-207ENST00000493648 FAM19A3Q7Z5A8 133 aa4.43□□□□□ -1.7
TOP3A-207ENST00000493648 LINC01561Q8N1V8 128 aa4.43□□□□□ -1.7
TOP3A-207ENST00000493648 STPG4Q8N801 248 aa4.43□□□□□ -1.7
TOP3A-207ENST00000493648 PLAC8Q9NZF1 115 aa4.43□□□□□ -1.7
TOP3A-207ENST00000493648 NDUFA1O15239 70 aa4.42□□□□□ -1.7
TOP3A-207ENST00000493648 LINC00614P0C842 121 aa4.42□□□□□ -1.7
TOP3A-207ENST00000493648 PTTG1IPP53801 180 aa4.42□□□□□ -1.7
TOP3A-207ENST00000493648 RAB5BP61020 215 aa4.42□□□□□ -1.7
TOP3A-207ENST00000493648 HERVK_113P63121 156 aa4.42□□□□□ -1.7
TOP3A-207ENST00000493648 GAGE2BQ13066 116 aa4.42□□□□□ -1.7
TOP3A-207ENST00000493648 LINC00173Q6ZV60 143 aa4.42□□□□□ -1.7
TOP3A-207ENST00000493648 C7orf33Q8WU49 177 aa4.42□□□□□ -1.7
TOP3A-207ENST00000493648 GEMIN7Q9H840 131 aaKnown RBP4.42□□□□□ -1.7
TOP3A-207ENST00000493648 MRPL35Q9NZE8 188 aaKnown RBP4.42□□□□□ -1.7
TOP3A-207ENST00000493648 PRSS2P07478 247 aa4.41□□□□□ -1.7
TOP3A-207ENST00000493648 UNQ6190/PRO20217Q6UXQ8 127 aa4.41□□□□□ -1.7
TOP3A-207ENST00000493648 C18orf32Q8TCD1 76 aa4.41□□□□□ -1.7
TOP3A-207ENST00000493648 PACRGQ96M98 296 aaPredicted RBP4.41□□□□□ -1.7
TOP3A-207ENST00000493648 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms