RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 C6orf48Q9UBA6 75 aa10.51□□□□□ -0.73
NUP50-218ENST00000493456 GAGE2DQ9UEU5 116 aa10.51□□□□□ -0.73
NUP50-218ENST00000493456 TMEM250H0YL14 139 aa10.5□□□□□ -0.73
NUP50-218ENST00000493456 UNQ6190/PRO20217Q6UXQ8 127 aa10.5□□□□□ -0.73
NUP50-218ENST00000493456 KRTAP7-1Q8IUC3 87 aa10.5□□□□□ -0.73
NUP50-218ENST00000493456 NRACQ8N912 160 aa10.5□□□□□ -0.73
NUP50-218ENST00000493456 SMKR1H3BMG3 65 aa10.49□□□□□ -0.73
NUP50-218ENST00000493456 TCAPO15273 167 aa10.47□□□□□ -0.73
NUP50-218ENST00000493456 ZNF861PO60384 105 aa10.47□□□□□ -0.73
NUP50-218ENST00000493456 MUC17Q685J3 4493 aa10.47□□□□□ -0.73
NUP50-218ENST00000493456 TRBV30A0A0K0K1B3 111 aa10.46□□□□□ -0.73
NUP50-218ENST00000493456 TSPAN13O95857 204 aa10.46□□□□□ -0.73
NUP50-218ENST00000493456 NDUFC2-KCTD14E9PQ53 114 aa10.45□□□□□ -0.74
NUP50-218ENST00000493456 MRPS36P82909 103 aaKnown RBP10.45□□□□□ -0.74
NUP50-218ENST00000493456 RIGQ13278 110 aa10.45□□□□□ -0.74
NUP50-218ENST00000493456 SPANXA1Q9NS26 97 aa10.45□□□□□ -0.74
NUP50-218ENST00000493456 TGIF2-C20orf24A0A0A6YYL0 155 aa10.44□□□□□ -0.74
NUP50-218ENST00000493456 IFITM10A6NMD0 228 aa10.44□□□□□ -0.74
NUP50-218ENST00000493456 NUPR1O60356 82 aa10.44□□□□□ -0.74
NUP50-218ENST00000493456 RPL39P62891 51 aaKnown RBP10.44□□□□□ -0.74
NUP50-218ENST00000493456 RPL32P62910 135 aaKnown RBP10.44□□□□□ -0.74
NUP50-218ENST00000493456 HBBP68871 147 aa10.44□□□□□ -0.74
NUP50-218ENST00000493456 FAM104AQ969W3 186 aa10.44□□□□□ -0.74
NUP50-218ENST00000493456 C20orf78Q9BR46 151 aa10.44□□□□□ -0.74
NUP50-218ENST00000493456 KIAA0087Q14695 138 aa10.43□□□□□ -0.74
NUP50-218ENST00000493456 C9orf129Q5T035 196 aaKnown RBP10.43□□□□□ -0.74
NUP50-218ENST00000493456 SLC51BQ86UW2 128 aa10.43□□□□□ -0.74
NUP50-218ENST00000493456 LINC01551Q86U37 167 aa10.42□□□□□ -0.74
NUP50-218ENST00000493456 OSTCQ9NRP0 149 aa10.42□□□□□ -0.74
NUP50-218ENST00000493456 TRBV24-1A0A075B6N3 115 aa10.41□□□□□ -0.74
NUP50-218ENST00000493456 LINC00862A6NCI5 91 aa10.41□□□□□ -0.74
NUP50-218ENST00000493456 CEBPGP53567 150 aa10.41□□□□□ -0.74
NUP50-218ENST00000493456 MRPL51Q4U2R6 128 aaKnown RBP10.41□□□□□ -0.74
NUP50-218ENST00000493456 PACRGQ96M98 296 aaPredicted RBP10.41□□□□□ -0.74
NUP50-218ENST00000493456 FAM104BQ5XKR9 115 aa10.4□□□□□ -0.74
NUP50-218ENST00000493456 SMIM7Q9BQ49 75 aa10.4□□□□□ -0.74
NUP50-218ENST00000493456 A0A087X002 238 aa10.39□□□□□ -0.75
NUP50-218ENST00000493456 TYMSOSQ8TAI1 123 aa10.39□□□□□ -0.75
NUP50-218ENST00000493456 CRYGAP11844 174 aa10.38□□□□□ -0.75
NUP50-218ENST00000493456 C2orf82Q6UX34 121 aa10.38□□□□□ -0.75
NUP50-218ENST00000493456 SMIM2Q9BVW6 85 aa10.38□□□□□ -0.75
NUP50-218ENST00000493456 LBHQ53QV2 105 aaPredicted RBP10.37□□□□□ -0.75
NUP50-218ENST00000493456 CTDSP1Q9GZU7 261 aa10.37□□□□□ -0.75
NUP50-218ENST00000493456 NAT8BQ9UHF3 227 aa10.37□□□□□ -0.75
NUP50-218ENST00000493456 V9GYV3 84 aa10.37□□□□□ -0.75
NUP50-218ENST00000493456 TNFRSF6BO95407 300 aa10.36□□□□□ -0.75
NUP50-218ENST00000493456 CKS2P33552 79 aa10.36□□□□□ -0.75
NUP50-218ENST00000493456 RPL28P46779 137 aaKnown RBP10.36□□□□□ -0.75
NUP50-218ENST00000493456 BLOC1S1P78537 153 aa10.36□□□□□ -0.75
NUP50-218ENST00000493456 C22orf24Q9Y442 160 aa10.36□□□□□ -0.75
NUP50-218ENST00000493456 IFI27P40305 119 aaPredicted RBP10.35□□□□□ -0.75
NUP50-218ENST00000493456 LINC00242Q5T6M2 205 aa10.35□□□□□ -0.75
NUP50-218ENST00000493456 LINC01561Q8N1V8 128 aa10.35□□□□□ -0.75
NUP50-218ENST00000493456 ZNF727A8MUV8 499 aa10.34□□□□□ -0.75
NUP50-218ENST00000493456 TPRXLQ17RH7 258 aa10.34□□□□□ -0.75
NUP50-218ENST00000493456 A0A1B0GW15 77 aa10.33□□□□□ -0.76
NUP50-218ENST00000493456 BCE1O60756 84 aa10.33□□□□□ -0.76
NUP50-218ENST00000493456 CDIP1Q9H305 208 aa10.33□□□□□ -0.76
NUP50-218ENST00000493456 TP73-AS1Q9UF72 201 aa10.33□□□□□ -0.76
NUP50-218ENST00000493456 PYGO1Q9Y3Y4 419 aa10.33□□□□□ -0.76
NUP50-218ENST00000493456 IGLV4-3A0A075B6K6 122 aa10.31□□□□□ -0.76
NUP50-218ENST00000493456 D6R8Y8 96 aa10.31□□□□□ -0.76
NUP50-218ENST00000493456 PRSS2P07478 247 aa10.31□□□□□ -0.76
NUP50-218ENST00000493456 FAM74A3Q4VXF1 159 aa10.31□□□□□ -0.76
NUP50-218ENST00000493456 TCTE3Q8IZS6 198 aa10.31□□□□□ -0.76
NUP50-218ENST00000493456 LINC00469Q8N7U9 141 aa10.31□□□□□ -0.76
NUP50-218ENST00000493456 TMEM141Q96I45 108 aa10.31□□□□□ -0.76
NUP50-218ENST00000493456 EIF5A2Q9GZV4 153 aaKnown RBP10.31□□□□□ -0.76
NUP50-218ENST00000493456 CKS1BP61024 79 aa10.3□□□□□ -0.76
NUP50-218ENST00000493456 MRPL55Q7Z7F7 128 aaKnown RBP10.3□□□□□ -0.76
NUP50-218ENST00000493456 SMIM27A0A1W2PRY6 76 aa10.29□□□□□ -0.76
NUP50-218ENST00000493456 NPYP01303 97 aa10.29□□□□□ -0.76
NUP50-218ENST00000493456 RAB5AP20339 215 aa10.29□□□□□ -0.76
NUP50-218ENST00000493456 TEX43Q6ZNM6 134 aa10.29□□□□□ -0.76
NUP50-218ENST00000493456 RETNLBQ9BQ08 111 aa10.29□□□□□ -0.76
NUP50-218ENST00000493456 XAGE1AQ9HD64 81 aa10.29□□□□□ -0.76
NUP50-218ENST00000493456 F8W036 122 aa10.28□□□□□ -0.76
NUP50-218ENST00000493456 PPBPP02775 128 aa10.28□□□□□ -0.76
NUP50-218ENST00000493456 Q6ZN92 141 aa10.28□□□□□ -0.76
NUP50-218ENST00000493456 C2orf88Q9BSF0 95 aa10.28□□□□□ -0.76
NUP50-218ENST00000493456 S100A8P05109 93 aa10.27□□□□□ -0.77
NUP50-218ENST00000493456 KRTAP13-2Q52LG2 175 aa10.27□□□□□ -0.77
NUP50-218ENST00000493456 C6orf226Q5I0X4 101 aa10.27□□□□□ -0.77
NUP50-218ENST00000493456 ALKAL2Q6UX46 152 aa10.27□□□□□ -0.77
NUP50-218ENST00000493456 Q8IZM0 81 aa10.27□□□□□ -0.77
NUP50-218ENST00000493456 LINC00304Q8N9R0 145 aa10.27□□□□□ -0.77
NUP50-218ENST00000493456 TOMM7Q9P0U1 55 aa10.27□□□□□ -0.77
NUP50-218ENST00000493456 SRP19P09132 144 aaKnown RBP10.26□□□□□ -0.77
NUP50-218ENST00000493456 CTAG1AP78358 180 aa10.26□□□□□ -0.77
NUP50-218ENST00000493456 FAM229BQ4G0N7 80 aa10.26□□□□□ -0.77
NUP50-218ENST00000493456 LINC00173Q6ZV60 143 aa10.25□□□□□ -0.77
NUP50-218ENST00000493456 ANAPC11Q9NYG5 84 aa10.25□□□□□ -0.77
NUP50-218ENST00000493456 IGLV7-46A0A075B6I9 117 aa10.24□□□□□ -0.77
NUP50-218ENST00000493456 RPL23P62829 140 aaKnown RBP10.24□□□□□ -0.77
NUP50-218ENST00000493456 ALKBH7Q9BT30 221 aaPredicted RBP10.24□□□□□ -0.77
NUP50-218ENST00000493456 F8VRH5 84 aa10.23□□□□□ -0.77
NUP50-218ENST00000493456 ORMDL3Q8N138 153 aa10.23□□□□□ -0.77
NUP50-218ENST00000493456 ADIRFQ15847 76 aa10.22□□□□□ -0.77
NUP50-218ENST00000493456 MRPL54Q6P161 138 aaKnown RBP10.22□□□□□ -0.77
NUP50-218ENST00000493456 LINC00167Q96N53 147 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms