RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 Q6ZRP5 223 aa10.71□□□□□ -0.69
SGMS1-204ENST00000492601 LINC01600Q96MT4 127 aa10.71□□□□□ -0.69
SGMS1-204ENST00000492601 SPANXA1Q9NS26 97 aa10.71□□□□□ -0.69
SGMS1-204ENST00000492601 PPBPP02775 128 aa10.69□□□□□ -0.7
SGMS1-204ENST00000492601 ODF1Q14990 250 aa10.69□□□□□ -0.7
SGMS1-204ENST00000492601 SPINK6Q6UWN8 80 aa10.69□□□□□ -0.7
SGMS1-204ENST00000492601 ORAOV1Q8WV07 137 aa10.69□□□□□ -0.7
SGMS1-204ENST00000492601 IFITM10A6NMD0 228 aa10.68□□□□□ -0.7
SGMS1-204ENST00000492601 MRPS36P82909 103 aaKnown RBP10.68□□□□□ -0.7
SGMS1-204ENST00000492601 TMEM136Q6ZRR5 245 aa10.68□□□□□ -0.7
SGMS1-204ENST00000492601 ORMDL3Q8N138 153 aa10.68□□□□□ -0.7
SGMS1-204ENST00000492601 OR10D4PQ8NGN7 298 aa10.68□□□□□ -0.7
SGMS1-204ENST00000492601 PRELID3AQ96N28 172 aa10.68□□□□□ -0.7
SGMS1-204ENST00000492601 IGHV3OR16-9A0A0B4J2B5 98 aa10.67□□□□□ -0.7
SGMS1-204ENST00000492601 RAB5AP20339 215 aa10.67□□□□□ -0.7
SGMS1-204ENST00000492601 C9orf116Q5BN46 136 aaPredicted RBP10.67□□□□□ -0.7
SGMS1-204ENST00000492601 LRP2P98164 4655 aa10.67□□□□□ -0.7
SGMS1-204ENST00000492601 SRSF9Q13242 221 aaKnown RBP eCLIP10.66□□□□□ -0.7
SGMS1-204ENST00000492601 REG3GQ6UW15 175 aa10.66□□□□□ -0.7
SGMS1-204ENST00000492601 ATP5L2Q7Z4Y8 100 aa10.66□□□□□ -0.7
SGMS1-204ENST00000492601 RNF151Q2KHN1 245 aa10.65□□□□□ -0.7
SGMS1-204ENST00000492601 LOC389332A0A1B0GUA5 103 aa10.64□□□□□ -0.71
SGMS1-204ENST00000492601 IFI27P40305 119 aaPredicted RBP10.64□□□□□ -0.71
SGMS1-204ENST00000492601 C10orf25Q5T742 122 aa10.64□□□□□ -0.71
SGMS1-204ENST00000492601 PHF5AQ7RTV0 110 aaKnown RBP10.64□□□□□ -0.71
SGMS1-204ENST00000492601 TGIF2-C20orf24A0A0A6YYL0 155 aa10.63□□□□□ -0.71
SGMS1-204ENST00000492601 NDUFA1O15239 70 aa10.63□□□□□ -0.71
SGMS1-204ENST00000492601 MT-ND6P03923 174 aa10.63□□□□□ -0.71
SGMS1-204ENST00000492601 UNQ6190/PRO20217Q6UXQ8 127 aa10.63□□□□□ -0.71
SGMS1-204ENST00000492601 MRPL35Q9NZE8 188 aaKnown RBP10.63□□□□□ -0.71
SGMS1-204ENST00000492601 PSORS1C2Q9UIG4 136 aa10.63□□□□□ -0.71
SGMS1-204ENST00000492601 IGLV4-3A0A075B6K6 122 aa10.62□□□□□ -0.71
SGMS1-204ENST00000492601 IMMP2LQ96T52 175 aa10.62□□□□□ -0.71
SGMS1-204ENST00000492601 KRTAP10-8P60410 259 aa10.61□□□□□ -0.71
SGMS1-204ENST00000492601 C6orf48Q9UBA6 75 aa10.61□□□□□ -0.71
SGMS1-204ENST00000492601 FAM168BA1KXE4 195 aa10.6□□□□□ -0.71
SGMS1-204ENST00000492601 F8WDY8 70 aa10.6□□□□□ -0.71
SGMS1-204ENST00000492601 C1orf137Q5JT78 98 aa10.6□□□□□ -0.71
SGMS1-204ENST00000492601 LINC00242Q5T6M2 205 aa10.6□□□□□ -0.71
SGMS1-204ENST00000492601 TMEM141Q96I45 108 aa10.6□□□□□ -0.71
SGMS1-204ENST00000492601 MAP1LC3AQ9H492 121 aa10.6□□□□□ -0.71
SGMS1-204ENST00000492601 PYGO1Q9Y3Y4 419 aa10.6□□□□□ -0.71
SGMS1-204ENST00000492601 A0A087WZ39 114 aa10.59□□□□□ -0.71
SGMS1-204ENST00000492601 MT-ND4LP03901 98 aa10.59□□□□□ -0.71
SGMS1-204ENST00000492601 PNRC1Q12796 327 aaPredicted RBP10.59□□□□□ -0.71
SGMS1-204ENST00000492601 GAGE2EQ4V326 116 aa10.59□□□□□ -0.71
SGMS1-204ENST00000492601 ZC2HC1BQ5TFG8 222 aa10.59□□□□□ -0.71
SGMS1-204ENST00000492601 GAGE2DQ9UEU5 116 aa10.59□□□□□ -0.71
SGMS1-204ENST00000492601 PRSS47A8MTI9 375 aa10.58□□□□□ -0.72
SGMS1-204ENST00000492601 KIAA0087Q14695 138 aa10.58□□□□□ -0.72
SGMS1-204ENST00000492601 TEX43Q6ZNM6 134 aa10.58□□□□□ -0.72
SGMS1-204ENST00000492601 ANAPC16Q96DE5 110 aa10.58□□□□□ -0.72
SGMS1-204ENST00000492601 LAMTOR2Q9Y2Q5 125 aa10.58□□□□□ -0.72
SGMS1-204ENST00000492601 TLX1NBP0CAT3 122 aa10.57□□□□□ -0.72
SGMS1-204ENST00000492601 C2orf82Q6UX34 121 aa10.57□□□□□ -0.72
SGMS1-204ENST00000492601 C2orf66Q6UXQ4 117 aa10.57□□□□□ -0.72
SGMS1-204ENST00000492601 FAM19A5Q7Z5A7 132 aaPredicted RBP10.57□□□□□ -0.72
SGMS1-204ENST00000492601 Q8N8P6 123 aa10.57□□□□□ -0.72
SGMS1-204ENST00000492601 UBE2D1P51668 147 aa10.56□□□□□ -0.72
SGMS1-204ENST00000492601 RAB14P61106 215 aa10.56□□□□□ -0.72
SGMS1-204ENST00000492601 CYSLTR1Q9Y271 337 aa10.56□□□□□ -0.72
SGMS1-204ENST00000492601 LINC00173Q6ZV60 143 aa10.55□□□□□ -0.72
SGMS1-204ENST00000492601 KRTAP11-1Q8IUC1 163 aa10.55□□□□□ -0.72
SGMS1-204ENST00000492601 C2orf88Q9BSF0 95 aa10.55□□□□□ -0.72
SGMS1-204ENST00000492601 Q6ZN92 141 aa10.54□□□□□ -0.72
SGMS1-204ENST00000492601 TRBV30A0A0K0K1B3 111 aa10.53□□□□□ -0.72
SGMS1-204ENST00000492601 IGLV7-43P04211 117 aa10.53□□□□□ -0.72
SGMS1-204ENST00000492601 ORMDL2Q53FV1 153 aa10.53□□□□□ -0.72
SGMS1-204ENST00000492601 VCX2Q9H322 139 aa10.53□□□□□ -0.72
SGMS1-204ENST00000492601 KRTAP7-1Q8IUC3 87 aa10.52□□□□□ -0.73
SGMS1-204ENST00000492601 PACRGQ96M98 296 aaPredicted RBP10.52□□□□□ -0.73
SGMS1-204ENST00000492601 AMELXQ99217 191 aa10.52□□□□□ -0.73
SGMS1-204ENST00000492601 CTDSP1Q9GZU7 261 aa10.52□□□□□ -0.73
SGMS1-204ENST00000492601 TOMM7Q9P0U1 55 aa10.51□□□□□ -0.73
SGMS1-204ENST00000492601 IGIPA6NJ69 53 aa10.5□□□□□ -0.73
SGMS1-204ENST00000492601 NDUFC2-KCTD14E9PQ53 114 aa10.5□□□□□ -0.73
SGMS1-204ENST00000492601 M0QXV9 152 aa10.5□□□□□ -0.73
SGMS1-204ENST00000492601 LINC01561Q8N1V8 128 aa10.5□□□□□ -0.73
SGMS1-204ENST00000492601 NXT2Q9NPJ8 142 aaKnown RBP10.5□□□□□ -0.73
SGMS1-204ENST00000492601 RNF213Q63HN8 5207 aa10.49□□□□□ -0.73
SGMS1-204ENST00000492601 PRSS2P07478 247 aa10.49□□□□□ -0.73
SGMS1-204ENST00000492601 UBE2BP63146 152 aa10.49□□□□□ -0.73
SGMS1-204ENST00000492601 KIAA1644Q3SXP7 199 aa10.49□□□□□ -0.73
SGMS1-204ENST00000492601 C9orf129Q5T035 196 aaKnown RBP10.49□□□□□ -0.73
SGMS1-204ENST00000492601 DIRC1Q969H9 104 aa10.49□□□□□ -0.73
SGMS1-204ENST00000492601 K7EMI3 77 aa10.48□□□□□ -0.73
SGMS1-204ENST00000492601 NPSP0C0P6 89 aa10.47□□□□□ -0.73
SGMS1-204ENST00000492601 CKS1BP61024 79 aa10.47□□□□□ -0.73
SGMS1-204ENST00000492601 C6orf226Q5I0X4 101 aa10.47□□□□□ -0.73
SGMS1-204ENST00000492601 PRR26Q8N8Z3 221 aa10.47□□□□□ -0.73
SGMS1-204ENST00000492601 H0Y9J4 135 aa10.46□□□□□ -0.73
SGMS1-204ENST00000492601 ADCYAP1P18509 176 aa10.46□□□□□ -0.73
SGMS1-204ENST00000492601 CLLU1Q5K131 121 aa10.46□□□□□ -0.73
SGMS1-204ENST00000492601 FAM19A3Q7Z5A8 133 aa10.46□□□□□ -0.73
SGMS1-204ENST00000492601 LINC00469Q8N7U9 141 aa10.46□□□□□ -0.73
SGMS1-204ENST00000492601 ALKBH7Q9BT30 221 aaPredicted RBP10.46□□□□□ -0.73
SGMS1-204ENST00000492601 CDKN2A-AS1Q9UH64 79 aa10.46□□□□□ -0.73
SGMS1-204ENST00000492601 HERVK_113P63121 156 aa10.45□□□□□ -0.74
SGMS1-204ENST00000492601 Q8IZM0 81 aa10.45□□□□□ -0.74
SGMS1-204ENST00000492601 TOMM6Q96B49 74 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms