RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 PRSS47A8MTI9 375 aa19.68■□□□□ 0.74
LDB1-204ENST00000490751 IFI27P40305 119 aaPredicted RBP19.68■□□□□ 0.74
LDB1-204ENST00000490751 SPAG11BQ08648 103 aa19.68■□□□□ 0.74
LDB1-204ENST00000490751 C2orf48Q96LS8 159 aa19.68■□□□□ 0.74
LDB1-204ENST00000490751 MAP1LC3AQ9H492 121 aa19.68■□□□□ 0.74
LDB1-204ENST00000490751 LOC107984640A0A0U1RRK4 108 aa19.67■□□□□ 0.74
LDB1-204ENST00000490751 PTTG1IPP53801 180 aa19.66■□□□□ 0.74
LDB1-204ENST00000490751 IGHV3OR16-9A0A0B4J2B5 98 aa19.65■□□□□ 0.74
LDB1-204ENST00000490751 GAGE2BQ13066 116 aa19.65■□□□□ 0.74
LDB1-204ENST00000490751 OR10D4PQ8NGN7 298 aa19.64■□□□□ 0.73
LDB1-204ENST00000490751 PYGO1Q9Y3Y4 419 aa19.64■□□□□ 0.73
LDB1-204ENST00000490751 ORAOV1Q8WV07 137 aa19.63■□□□□ 0.73
LDB1-204ENST00000490751 IGLV4-3A0A075B6K6 122 aa19.62■□□□□ 0.73
LDB1-204ENST00000490751 ADCYAP1P18509 176 aa19.62■□□□□ 0.73
LDB1-204ENST00000490751 PRR3P79522 188 aaKnown RBP19.62■□□□□ 0.73
LDB1-204ENST00000490751 Q8N8P6 123 aa19.62■□□□□ 0.73
LDB1-204ENST00000490751 IFITM2Q01629 132 aa19.61■□□□□ 0.73
LDB1-204ENST00000490751 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP19.6■□□□□ 0.73
LDB1-204ENST00000490751 UQCC3Q6UW78 93 aa19.6■□□□□ 0.73
LDB1-204ENST00000490751 TMEM141Q96I45 108 aa19.59■□□□□ 0.73
LDB1-204ENST00000490751 TGIF2-C20orf24A0A0A6YYL0 155 aa19.58■□□□□ 0.72
LDB1-204ENST00000490751 SERTAD4-AS1Q5TG53 156 aa19.58■□□□□ 0.72
LDB1-204ENST00000490751 IMMP2LQ96T52 175 aa19.58■□□□□ 0.72
LDB1-204ENST00000490751 CTDSP1Q9GZU7 261 aa19.58■□□□□ 0.72
LDB1-204ENST00000490751 A0A0J9YXV3 536 aa19.57■□□□□ 0.72
LDB1-204ENST00000490751 TMEM218A2RU14 115 aa19.57■□□□□ 0.72
LDB1-204ENST00000490751 RPL18AQ02543 176 aaKnown RBP19.57■□□□□ 0.72
LDB1-204ENST00000490751 CYSLTR1Q9Y271 337 aa19.57■□□□□ 0.72
LDB1-204ENST00000490751 RNF151Q2KHN1 245 aa19.56■□□□□ 0.72
LDB1-204ENST00000490751 C2orf66Q6UXQ4 117 aa19.56■□□□□ 0.72
LDB1-204ENST00000490751 LINC00242Q5T6M2 205 aa19.55■□□□□ 0.72
LDB1-204ENST00000490751 F8WDY8 70 aa19.54■□□□□ 0.72
LDB1-204ENST00000490751 ORMDL2Q53FV1 153 aa19.54■□□□□ 0.72
LDB1-204ENST00000490751 TEX43Q6ZNM6 134 aa19.54■□□□□ 0.72
LDB1-204ENST00000490751 MRPL35Q9NZE8 188 aaKnown RBP19.54■□□□□ 0.72
LDB1-204ENST00000490751 A0A1W2PNN7 141 aa19.53■□□□□ 0.72
LDB1-204ENST00000490751 NDUFA1O15239 70 aa19.53■□□□□ 0.72
LDB1-204ENST00000490751 MT1HL1P0DM35 61 aa19.53■□□□□ 0.72
LDB1-204ENST00000490751 A0A087WZ39 114 aa19.52■□□□□ 0.72
LDB1-204ENST00000490751 K7EMI3 77 aa19.51■□□□□ 0.71
LDB1-204ENST00000490751 C2orf88Q9BSF0 95 aa19.51■□□□□ 0.71
LDB1-204ENST00000490751 NXT2Q9NPJ8 142 aaKnown RBP19.51■□□□□ 0.71
LDB1-204ENST00000490751 UBE2D1P51668 147 aa19.5■□□□□ 0.71
LDB1-204ENST00000490751 C10orf25Q5T742 122 aa19.5■□□□□ 0.71
LDB1-204ENST00000490751 ZC2HC1BQ5TFG8 222 aa19.5■□□□□ 0.71
LDB1-204ENST00000490751 Q6ZN92 141 aa19.5■□□□□ 0.71
LDB1-204ENST00000490751 C9orf116Q5BN46 136 aaPredicted RBP19.49■□□□□ 0.71
LDB1-204ENST00000490751 KIAA1644Q3SXP7 199 aa19.48■□□□□ 0.71
LDB1-204ENST00000490751 UNQ6190/PRO20217Q6UXQ8 127 aa19.48■□□□□ 0.71
LDB1-204ENST00000490751 Q6ZRP5 223 aa19.48■□□□□ 0.71
LDB1-204ENST00000490751 LINC00173Q6ZV60 143 aa19.48■□□□□ 0.71
LDB1-204ENST00000490751 SEC11CQ9BY50 192 aa19.48■□□□□ 0.71
LDB1-204ENST00000490751 TRAV9-1A0A075B6T8 112 aa19.47■□□□□ 0.71
LDB1-204ENST00000490751 AMELXQ99217 191 aa19.47■□□□□ 0.71
LDB1-204ENST00000490751 HMCN2Q8NDA2 5059 aa19.46■□□□□ 0.71
LDB1-204ENST00000490751 KIAA0087Q14695 138 aa19.46■□□□□ 0.71
LDB1-204ENST00000490751 VCX2Q9H322 139 aa19.46■□□□□ 0.71
LDB1-204ENST00000490751 C6orf48Q9UBA6 75 aa19.46■□□□□ 0.71
LDB1-204ENST00000490751 IGIPA6NJ69 53 aa19.45■□□□□ 0.7
LDB1-204ENST00000490751 NPSP0C0P6 89 aa19.44■□□□□ 0.7
LDB1-204ENST00000490751 COMMD7Q86VX2 200 aa19.43■□□□□ 0.7
LDB1-204ENST00000490751 TLX1NBP0CAT3 122 aa19.42■□□□□ 0.7
LDB1-204ENST00000490751 S100PP25815 95 aa19.42■□□□□ 0.7
LDB1-204ENST00000490751 SPINK6Q6UWN8 80 aa19.41■□□□□ 0.7
LDB1-204ENST00000490751 LINC01561Q8N1V8 128 aa19.41■□□□□ 0.7
LDB1-204ENST00000490751 G0S2P27469 103 aa19.4■□□□□ 0.7
LDB1-204ENST00000490751 PLA2G2DQ9UNK4 145 aa19.4■□□□□ 0.7
LDB1-204ENST00000490751 PHF5AQ7RTV0 110 aaKnown RBP19.39■□□□□ 0.69
LDB1-204ENST00000490751 C2orf82Q6UX34 121 aa19.38■□□□□ 0.69
LDB1-204ENST00000490751 GNB1LQ9BYB4 327 aa19.38■□□□□ 0.69
LDB1-204ENST00000490751 SRSF9Q13242 221 aaKnown RBP eCLIP19.37■□□□□ 0.69
LDB1-204ENST00000490751 PAPPA-AS1Q5QFB9 102 aa19.37■□□□□ 0.69
LDB1-204ENST00000490751 FAM19A3Q7Z5A8 133 aa19.37■□□□□ 0.69
LDB1-204ENST00000490751 TOMM6Q96B49 74 aa19.37■□□□□ 0.69
LDB1-204ENST00000490751 LINC01600Q96MT4 127 aa19.37■□□□□ 0.69
LDB1-204ENST00000490751 TIMM17AQ99595 171 aa19.37■□□□□ 0.69
LDB1-204ENST00000490751 TNXBP22105 4242 aa19.37■□□□□ 0.69
LDB1-204ENST00000490751 GAGE2EQ4V326 116 aa19.36■□□□□ 0.69
LDB1-204ENST00000490751 GAGE2DQ9UEU5 116 aa19.36■□□□□ 0.69
LDB1-204ENST00000490751 TRBV30A0A0K0K1B3 111 aa19.35■□□□□ 0.69
LDB1-204ENST00000490751 PSORS1C2Q9UIG4 136 aa19.35■□□□□ 0.69
LDB1-204ENST00000490751 FAM168BA1KXE4 195 aa19.34■□□□□ 0.69
LDB1-204ENST00000490751 PACRGQ96M98 296 aaPredicted RBP19.34■□□□□ 0.69
LDB1-204ENST00000490751 MT-ND6P03923 174 aa19.33■□□□□ 0.68
LDB1-204ENST00000490751 ALKBH7Q9BT30 221 aaPredicted RBP19.33■□□□□ 0.68
LDB1-204ENST00000490751 SEC11AP67812 179 aa19.32■□□□□ 0.68
LDB1-204ENST00000490751 C10orf91Q5T1B1 145 aa19.32■□□□□ 0.68
LDB1-204ENST00000490751 REG3GQ6UW15 175 aa19.32■□□□□ 0.68
LDB1-204ENST00000490751 TOMM7Q9P0U1 55 aa19.32■□□□□ 0.68
LDB1-204ENST00000490751 PRSS2P07478 247 aa19.31■□□□□ 0.68
LDB1-204ENST00000490751 HERVK_113P63121 156 aa19.31■□□□□ 0.68
LDB1-204ENST00000490751 COX19Q49B96 90 aa19.31■□□□□ 0.68
LDB1-204ENST00000490751 ERASQ7Z444 233 aa19.31■□□□□ 0.68
LDB1-204ENST00000490751 FAM19A5Q7Z5A7 132 aaPredicted RBP19.31■□□□□ 0.68
LDB1-204ENST00000490751 SCGB3A1Q96QR1 104 aa19.31■□□□□ 0.68
LDB1-204ENST00000490751 CARHSP1Q9Y2V2 147 aaKnown RBP19.3■□□□□ 0.68
LDB1-204ENST00000490751 NDUFC2-KCTD14E9PQ53 114 aa19.29■□□□□ 0.68
LDB1-204ENST00000490751 RHEBQ15382 184 aa19.29■□□□□ 0.68
LDB1-204ENST00000490751 GEMIN7Q9H840 131 aaKnown RBP19.29■□□□□ 0.68
LDB1-204ENST00000490751 RPS10P5Q9NQ39 176 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms