RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 FAM223AQ8IWN6 122 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 MUC7Q8TAX7 377 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 SCGB3A1Q96QR1 104 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 TIMM21Q9BVV7 248 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 PROK2Q9HC23 129 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 MRPL35Q9NZE8 188 aaKnown RBP1.79□□□□□ -2.12
SSR1-209ENST00000488834 ZGRF1Q86YA3 2104 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 UNC13CQ8NB66 2214 aa1.79□□□□□ -2.12
SSR1-209ENST00000488834 KNTC1P50748 2209 aa1.78□□□□□ -2.12
SSR1-209ENST00000488834 USF3Q68DE3 2245 aa1.78□□□□□ -2.12
SSR1-209ENST00000488834 COL4A1P02462 1669 aa1.78□□□□□ -2.12
SSR1-209ENST00000488834 TRBV10-3A0A0K0K1G6 114 aa1.78□□□□□ -2.12
SSR1-209ENST00000488834 C17orf98A8MV24 154 aa1.78□□□□□ -2.12
SSR1-209ENST00000488834 C19orf84I3L1E1 186 aa1.78□□□□□ -2.12
SSR1-209ENST00000488834 IGLV3-1P01715 115 aa1.78□□□□□ -2.12
SSR1-209ENST00000488834 COX6CP09669 75 aa1.78□□□□□ -2.12
SSR1-209ENST00000488834 CD24P25063 80 aa1.78□□□□□ -2.12
SSR1-209ENST00000488834 ZNF137PP52743 207 aa1.78□□□□□ -2.12
SSR1-209ENST00000488834 CIRBPQ14011 172 aaKnown RBP1.78□□□□□ -2.12
SSR1-209ENST00000488834 SFTA2Q6UW10 78 aa1.78□□□□□ -2.12
SSR1-209ENST00000488834 DYNAPQ8N1N2 210 aa1.78□□□□□ -2.12
SSR1-209ENST00000488834 UBE2D4Q9Y2X8 147 aa1.78□□□□□ -2.12
SSR1-209ENST00000488834 TIMM8BQ9Y5J9 83 aaPredicted RBP1.78□□□□□ -2.12
SSR1-209ENST00000488834 SEC16AO15027 2179 aa1.78□□□□□ -2.13
SSR1-209ENST00000488834 SDK2Q58EX2 2172 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 IGKV1D-42A0A075B6H8 117 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 IGHV3-15A0A0B4J1V0 119 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 TMEM30CPA0ZSE6 113 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 ZNF815PA8K554 130 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 E7EQL1 145 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 F8VRH5 84 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 ERC2-IT1O76042 136 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 DEFA4P12838 97 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 HRES1P13985 223 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 PI4KAP42356 2102 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 RPS27P42677 84 aaKnown RBP1.77□□□□□ -2.13
SSR1-209ENST00000488834 RPL28P46779 137 aaKnown RBP1.77□□□□□ -2.13
SSR1-209ENST00000488834 PLGLAQ15195 96 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 ESRGQ1W209 222 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 ATP5EP2Q5VTU8 51 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 ATP11AUNQ6ZP68 121 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 ZNF826PQ6ZT77 177 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 VMO1Q7Z5L0 202 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 C20orf197Q8N268 126 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 DIRC1Q969H9 104 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 SPTSSAQ969W0 71 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 R4GN34 69 aa1.77□□□□□ -2.13
SSR1-209ENST00000488834 A0A0J9YX75 114 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 A6NN06 94 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 D6R8Y8 96 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 E7EUB6 86 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 C3orf84H3BNL1 204 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 CCL4P13236 92 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 SPINT3P49223 89 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 KRTAP12-4P60329 112 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 BLCAPP62952 87 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 S100A7L2Q5SY68 101 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 HCP5Q6MZN7 132 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 SOSTDC1Q6X4U4 206 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 LINC00322Q6ZN03 302 aaPredicted RBP1.76□□□□□ -2.13
SSR1-209ENST00000488834 C7orf65Q6ZTY9 151 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 Q8IYB0 196 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 FAM216BQ8N7L0 139 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 FAM167A-AS1Q96KT0 104 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 BPESC1Q9GZL8 116 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 MUC22E2RYF6 1773 aaPredicted RBP1.76□□□□□ -2.13
SSR1-209ENST00000488834 MED13Q9UHV7 2174 aa1.76□□□□□ -2.13
SSR1-209ENST00000488834 RP1P56715 2156 aa1.75□□□□□ -2.13
SSR1-209ENST00000488834 MALRD1Q5VYJ5 2156 aa1.75□□□□□ -2.13
SSR1-209ENST00000488834 COL4A5P29400 1685 aa1.75□□□□□ -2.13
SSR1-209ENST00000488834 IGKV3D-7A0A0C4DH55 119 aa1.75□□□□□ -2.13
SSR1-209ENST00000488834 SDHAF1A6NFY7 115 aa1.75□□□□□ -2.13
SSR1-209ENST00000488834 IGIPA6NJ69 53 aa1.75□□□□□ -2.13
SSR1-209ENST00000488834 F8WEM9 126 aa1.75□□□□□ -2.13
SSR1-209ENST00000488834 H3BPC8 53 aa1.75□□□□□ -2.13
SSR1-209ENST00000488834 NDUFA3O95167 84 aa1.75□□□□□ -2.13
SSR1-209ENST00000488834 MSMBP08118 114 aa1.75□□□□□ -2.13
SSR1-209ENST00000488834 ARMS2P0C7Q2 107 aa1.75□□□□□ -2.13
SSR1-209ENST00000488834 MIFP14174 115 aa1.75□□□□□ -2.13
SSR1-209ENST00000488834 DYNLRB2Q8TF09 96 aa1.75□□□□□ -2.13
SSR1-209ENST00000488834 ZCCHC13Q8WW36 166 aaKnown RBP1.75□□□□□ -2.13
SSR1-209ENST00000488834 OBSCN-AS1Q96MR7 158 aa1.75□□□□□ -2.13
SSR1-209ENST00000488834 AMELXQ99217 191 aa1.75□□□□□ -2.13
SSR1-209ENST00000488834 C22orf24Q9Y442 160 aa1.75□□□□□ -2.13
SSR1-209ENST00000488834 MUC4Q99102 2169 aa1.75□□□□□ -2.13
SSR1-209ENST00000488834 KMT2BQ9UMN6 2715 aaPredicted RBP1.74□□□□□ -2.13
SSR1-209ENST00000488834 CXorf51AA0A1B0GTR3 108 aa1.74□□□□□ -2.13
SSR1-209ENST00000488834 hDV103S1A0JD37 113 aa1.74□□□□□ -2.13
SSR1-209ENST00000488834 C11orf86A6NJI1 115 aa1.74□□□□□ -2.13
SSR1-209ENST00000488834 I3L3M4 83 aa1.74□□□□□ -2.13
SSR1-209ENST00000488834 BAALC-AS2P0C853 105 aa1.74□□□□□ -2.13
SSR1-209ENST00000488834 FUSP35637 526 aaKnown RBP eCLIP1.74□□□□□ -2.13
SSR1-209ENST00000488834 KRTAP25-1Q3LHN0 102 aa1.74□□□□□ -2.13
SSR1-209ENST00000488834 MUSTN1Q8IVN3 82 aa1.74□□□□□ -2.13
SSR1-209ENST00000488834 Q8NAQ8 132 aa1.74□□□□□ -2.13
SSR1-209ENST00000488834 Q8NDZ9 215 aa1.74□□□□□ -2.13
SSR1-209ENST00000488834 MINOS1-NBL1R4GNA1 71 aa1.74□□□□□ -2.13
SSR1-209ENST00000488834 DNAJC13O75165 2243 aa1.74□□□□□ -2.13
SSR1-209ENST00000488834 RTTNQ86VV8 2226 aa1.74□□□□□ -2.13
SSR1-209ENST00000488834 CACNA1AO00555 2505 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms