RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 DPH3Q96FX2 82 aa8.34□□□□□ -1.07
PHF1-210ENST00000488767 OPRPNQ99935 248 aaPredicted RBP8.34□□□□□ -1.07
PHF1-210ENST00000488767 SMR3BP02814 79 aaPredicted RBP8.33□□□□□ -1.08
PHF1-210ENST00000488767 C5orf38Q86SI9 138 aa8.33□□□□□ -1.08
PHF1-210ENST00000488767 SEC11AP67812 179 aa8.32□□□□□ -1.08
PHF1-210ENST00000488767 Q5VSD8 79 aa8.32□□□□□ -1.08
PHF1-210ENST00000488767 SCXQ7RTU7 201 aa8.32□□□□□ -1.08
PHF1-210ENST00000488767 TOMM6Q96B49 74 aa8.32□□□□□ -1.08
PHF1-210ENST00000488767 CARD19Q96LW7 228 aa8.32□□□□□ -1.08
PHF1-210ENST00000488767 SCGB3A1Q96QR1 104 aa8.32□□□□□ -1.08
PHF1-210ENST00000488767 TIMM17AQ99595 171 aa8.32□□□□□ -1.08
PHF1-210ENST00000488767 IGIPA6NJ69 53 aa8.31□□□□□ -1.08
PHF1-210ENST00000488767 RAB5BP61020 215 aa8.31□□□□□ -1.08
PHF1-210ENST00000488767 SYCNQ0VAF6 134 aa8.31□□□□□ -1.08
PHF1-210ENST00000488767 SDIM1Q6ZPB5 146 aa8.31□□□□□ -1.08
PHF1-210ENST00000488767 ERASQ7Z444 233 aa8.31□□□□□ -1.08
PHF1-210ENST00000488767 OR10D4PQ8NGN7 298 aa8.31□□□□□ -1.08
PHF1-210ENST00000488767 CAMK2N2Q96S95 79 aa8.31□□□□□ -1.08
PHF1-210ENST00000488767 ABCA13Q86UQ4 5058 aa8.31□□□□□ -1.08
PHF1-210ENST00000488767 SLPIP03973 132 aa8.3□□□□□ -1.08
PHF1-210ENST00000488767 PLA2G1BP04054 148 aaKnown RBP8.3□□□□□ -1.08
PHF1-210ENST00000488767 SPAG11BQ08648 103 aa8.3□□□□□ -1.08
PHF1-210ENST00000488767 CIRBP-AS1Q8TBR5 109 aa8.3□□□□□ -1.08
PHF1-210ENST00000488767 LINC00474Q9P2X8 69 aa8.3□□□□□ -1.08
PHF1-210ENST00000488767 DNAH8Q96JB1 4490 aa8.3□□□□□ -1.08
PHF1-210ENST00000488767 IGLV4-69A0A075B6H9 119 aa8.29□□□□□ -1.08
PHF1-210ENST00000488767 IGHV3OR16-9A0A0B4J2B5 98 aa8.29□□□□□ -1.08
PHF1-210ENST00000488767 COX6A2Q02221 97 aa8.29□□□□□ -1.08
PHF1-210ENST00000488767 LINC00528Q8N1L1 170 aa8.29□□□□□ -1.08
PHF1-210ENST00000488767 ORAOV1Q8WV07 137 aa8.29□□□□□ -1.08
PHF1-210ENST00000488767 C2orf48Q96LS8 159 aa8.29□□□□□ -1.08
PHF1-210ENST00000488767 AMELXQ99217 191 aa8.29□□□□□ -1.08
PHF1-210ENST00000488767 F8WDY8 70 aa8.28□□□□□ -1.08
PHF1-210ENST00000488767 UBE2D1P51668 147 aa8.28□□□□□ -1.08
PHF1-210ENST00000488767 LINC00242Q5T6M2 205 aa8.28□□□□□ -1.08
PHF1-210ENST00000488767 FAM19A3Q7Z5A8 133 aa8.28□□□□□ -1.08
PHF1-210ENST00000488767 C18orf32Q8TCD1 76 aa8.28□□□□□ -1.08
PHF1-210ENST00000488767 LINC00526Q96FQ7 95 aa8.28□□□□□ -1.08
PHF1-210ENST00000488767 GEMIN7Q9H840 131 aaKnown RBP8.28□□□□□ -1.08
PHF1-210ENST00000488767 A0A087WZ39 114 aa8.27□□□□□ -1.09
PHF1-210ENST00000488767 LINC00614P0C842 121 aa8.27□□□□□ -1.09
PHF1-210ENST00000488767 HERVK_113P63121 156 aa8.27□□□□□ -1.09
PHF1-210ENST00000488767 CBLN2Q8IUK8 224 aa8.27□□□□□ -1.09
PHF1-210ENST00000488767 LINC01561Q8N1V8 128 aa8.27□□□□□ -1.09
PHF1-210ENST00000488767 PACRGQ96M98 296 aaPredicted RBP8.27□□□□□ -1.09
PHF1-210ENST00000488767 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.27□□□□□ -1.09
PHF1-210ENST00000488767 IGKV2-24A0A0C4DH68 120 aa8.26□□□□□ -1.09
PHF1-210ENST00000488767 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.26□□□□□ -1.09
PHF1-210ENST00000488767 PRSS2P07478 247 aa8.26□□□□□ -1.09
PHF1-210ENST00000488767 KRTAP4-5Q9BYR2 181 aa8.26□□□□□ -1.09
PHF1-210ENST00000488767 LOC107984640A0A0U1RRK4 108 aa8.25□□□□□ -1.09
PHF1-210ENST00000488767 NDUFA1O15239 70 aa8.25□□□□□ -1.09
PHF1-210ENST00000488767 CIRBPQ14011 172 aaKnown RBP8.25□□□□□ -1.09
PHF1-210ENST00000488767 MAJINQ3KP22 176 aa8.25□□□□□ -1.09
PHF1-210ENST00000488767 LINC00173Q6ZV60 143 aa8.25□□□□□ -1.09
PHF1-210ENST00000488767 SPACA4Q8TDM5 124 aa8.25□□□□□ -1.09
PHF1-210ENST00000488767 HBDP02042 147 aa8.24□□□□□ -1.09
PHF1-210ENST00000488767 CHTF8P0CG12 524 aa8.24□□□□□ -1.09
PHF1-210ENST00000488767 INAFM2P0DMQ5 153 aa8.24□□□□□ -1.09
PHF1-210ENST00000488767 ZC2HC1BQ5TFG8 222 aa8.24□□□□□ -1.09
PHF1-210ENST00000488767 Q6ZRU5 148 aa8.24□□□□□ -1.09
PHF1-210ENST00000488767 URB1-AS1Q96HZ7 61 aa8.24□□□□□ -1.09
PHF1-210ENST00000488767 FAT1Q14517 4588 aa8.24□□□□□ -1.09
PHF1-210ENST00000488767 COLCA2A8K830 154 aa8.23□□□□□ -1.09
PHF1-210ENST00000488767 PMVKQ15126 192 aa8.23□□□□□ -1.09
PHF1-210ENST00000488767 RNF151Q2KHN1 245 aa8.23□□□□□ -1.09
PHF1-210ENST00000488767 C7orf33Q8WU49 177 aa8.23□□□□□ -1.09
PHF1-210ENST00000488767 CHCHD1Q96BP2 118 aaKnown RBP8.23□□□□□ -1.09
PHF1-210ENST00000488767 A0A087WYN8 130 aa8.22□□□□□ -1.09
PHF1-210ENST00000488767 PANO1I0J062 215 aa8.22□□□□□ -1.09
PHF1-210ENST00000488767 ATP5LO75964 103 aa8.22□□□□□ -1.09
PHF1-210ENST00000488767 NDUFA6P56556 154 aa8.22□□□□□ -1.09
PHF1-210ENST00000488767 CKS1BP61024 79 aa8.22□□□□□ -1.09
PHF1-210ENST00000488767 LINC00469Q8N7U9 141 aa8.22□□□□□ -1.09
PHF1-210ENST00000488767 STPG4Q8N801 248 aa8.22□□□□□ -1.09
PHF1-210ENST00000488767 KRTAP17-1Q9BYP8 105 aa8.22□□□□□ -1.09
PHF1-210ENST00000488767 MRPL35Q9NZE8 188 aaKnown RBP8.22□□□□□ -1.09
PHF1-210ENST00000488767 SRRM2Q9UQ35 2752 aaKnown RBP8.21□□□□□ -1.1
PHF1-210ENST00000488767 A0A096LNI7 61 aa8.21□□□□□ -1.1
PHF1-210ENST00000488767 A0A096LNJ9 63 aa8.21□□□□□ -1.1
PHF1-210ENST00000488767 A0A0J9YXV3 536 aa8.21□□□□□ -1.1
PHF1-210ENST00000488767 TINCRA0A1B0GVN0 87 aa8.21□□□□□ -1.1
PHF1-210ENST00000488767 RPL37AP61513 92 aaKnown RBP8.21□□□□□ -1.1
PHF1-210ENST00000488767 RPL18AQ02543 176 aaKnown RBP8.21□□□□□ -1.1
PHF1-210ENST00000488767 GAGE2BQ13066 116 aa8.21□□□□□ -1.1
PHF1-210ENST00000488767 C6orf226Q5I0X4 101 aa8.21□□□□□ -1.1
PHF1-210ENST00000488767 BAGE3Q86Y29 109 aa8.21□□□□□ -1.1
PHF1-210ENST00000488767 CST9LQ9H4G1 147 aa8.21□□□□□ -1.1
PHF1-210ENST00000488767 PLAC8Q9NZF1 115 aa8.21□□□□□ -1.1
PHF1-210ENST00000488767 TOMM7Q9P0U1 55 aa8.21□□□□□ -1.1
PHF1-210ENST00000488767 H3BRM9 83 aa8.2□□□□□ -1.1
PHF1-210ENST00000488767 TRGC2P03986 189 aa8.2□□□□□ -1.1
PHF1-210ENST00000488767 PTTG1IPP53801 180 aa8.2□□□□□ -1.1
PHF1-210ENST00000488767 PDZD11Q5EBL8 140 aa8.2□□□□□ -1.1
PHF1-210ENST00000488767 TRBV30A0A0K0K1B3 111 aa8.19□□□□□ -1.1
PHF1-210ENST00000488767 PMCHL1Q16048 86 aa8.19□□□□□ -1.1
PHF1-210ENST00000488767 Q8IZM0 81 aa8.19□□□□□ -1.1
PHF1-210ENST00000488767 CDKN2A-AS1Q9UH64 79 aa8.19□□□□□ -1.1
PHF1-210ENST00000488767 IGLV5-45A0A087WSX0 123 aa8.18□□□□□ -1.1
PHF1-210ENST00000488767 HSBP1O75506 76 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms