RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 KRTAP17-1Q9BYP8 105 aa11.47□□□□□ -0.57
SREBF1-213ENST00000485080 FA2HQ7L5A8 372 aa11.46□□□□□ -0.57
SREBF1-213ENST00000485080 ERASQ7Z444 233 aa11.46□□□□□ -0.57
SREBF1-213ENST00000485080 CBLN2Q8IUK8 224 aa11.46□□□□□ -0.57
SREBF1-213ENST00000485080 C18orf32Q8TCD1 76 aa11.46□□□□□ -0.57
SREBF1-213ENST00000485080 VCX2Q9H322 139 aa11.46□□□□□ -0.57
SREBF1-213ENST00000485080 ABCA13Q86UQ4 5058 aa11.46□□□□□ -0.58
SREBF1-213ENST00000485080 MALP21145 153 aa11.45□□□□□ -0.58
SREBF1-213ENST00000485080 UBE2D1P51668 147 aa11.45□□□□□ -0.58
SREBF1-213ENST00000485080 HIGD2BQ4VC39 106 aa11.45□□□□□ -0.58
SREBF1-213ENST00000485080 LINC00173Q6ZV60 143 aa11.45□□□□□ -0.58
SREBF1-213ENST00000485080 FAM19A3Q7Z5A8 133 aa11.45□□□□□ -0.58
SREBF1-213ENST00000485080 C2orf88Q9BSF0 95 aa11.45□□□□□ -0.58
SREBF1-213ENST00000485080 CHAC1Q9BUX1 264 aa11.45□□□□□ -0.58
SREBF1-213ENST00000485080 IGHV3-64A0A075B6Q5 118 aa11.44□□□□□ -0.58
SREBF1-213ENST00000485080 APOMO95445 188 aa11.44□□□□□ -0.58
SREBF1-213ENST00000485080 LINC00242Q5T6M2 205 aa11.44□□□□□ -0.58
SREBF1-213ENST00000485080 LINC00614P0C842 121 aa11.43□□□□□ -0.58
SREBF1-213ENST00000485080 C5orf38Q86SI9 138 aa11.43□□□□□ -0.58
SREBF1-213ENST00000485080 A0A087WZ39 114 aa11.42□□□□□ -0.58
SREBF1-213ENST00000485080 ZNF561-AS1K7EIQ3 104 aa11.42□□□□□ -0.58
SREBF1-213ENST00000485080 LINC01561Q8N1V8 128 aa11.42□□□□□ -0.58
SREBF1-213ENST00000485080 URB1-AS1Q96HZ7 61 aa11.42□□□□□ -0.58
SREBF1-213ENST00000485080 SCGB3A1Q96QR1 104 aa11.42□□□□□ -0.58
SREBF1-213ENST00000485080 PCLOQ9Y6V0 5065 aa11.41□□□□□ -0.58
SREBF1-213ENST00000485080 RAB5BP61020 215 aa11.41□□□□□ -0.58
SREBF1-213ENST00000485080 CIRBPQ14011 172 aaKnown RBP11.41□□□□□ -0.58
SREBF1-213ENST00000485080 OR10D4PQ8NGN7 298 aa11.41□□□□□ -0.58
SREBF1-213ENST00000485080 C2orf48Q96LS8 159 aa11.41□□□□□ -0.58
SREBF1-213ENST00000485080 F8WDY8 70 aa11.4□□□□□ -0.58
SREBF1-213ENST00000485080 SCXQ7RTU7 201 aa11.4□□□□□ -0.58
SREBF1-213ENST00000485080 KRTAP4-5Q9BYR2 181 aa11.4□□□□□ -0.58
SREBF1-213ENST00000485080 SRRM2Q9UQ35 2752 aaKnown RBP11.39□□□□□ -0.59
SREBF1-213ENST00000485080 SEC11AP67812 179 aa11.39□□□□□ -0.59
SREBF1-213ENST00000485080 COX6A2Q02221 97 aa11.39□□□□□ -0.59
SREBF1-213ENST00000485080 ZC2HC1BQ5TFG8 222 aa11.39□□□□□ -0.59
SREBF1-213ENST00000485080 PKIGQ9Y2B9 76 aa11.39□□□□□ -0.59
SREBF1-213ENST00000485080 IGLV4-69A0A075B6H9 119 aa11.38□□□□□ -0.59
SREBF1-213ENST00000485080 A0A096LNJ9 63 aa11.38□□□□□ -0.59
SREBF1-213ENST00000485080 HAMPP81172 84 aa11.38□□□□□ -0.59
SREBF1-213ENST00000485080 SYCNQ0VAF6 134 aa11.38□□□□□ -0.59
SREBF1-213ENST00000485080 CIRBP-AS1Q8TBR5 109 aa11.38□□□□□ -0.59
SREBF1-213ENST00000485080 LINC00526Q96FQ7 95 aa11.38□□□□□ -0.59
SREBF1-213ENST00000485080 CARD19Q96LW7 228 aa11.38□□□□□ -0.59
SREBF1-213ENST00000485080 COLCA2A8K830 154 aa11.37□□□□□ -0.59
SREBF1-213ENST00000485080 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.37□□□□□ -0.59
SREBF1-213ENST00000485080 EPM2AB3EWF7 344 aa11.36□□□□□ -0.59
SREBF1-213ENST00000485080 HBDP02042 147 aa11.36□□□□□ -0.59
SREBF1-213ENST00000485080 HERVK_113P63121 156 aa11.36□□□□□ -0.59
SREBF1-213ENST00000485080 SPAG11BQ08648 103 aa11.36□□□□□ -0.59
SREBF1-213ENST00000485080 CHCHD1Q96BP2 118 aaKnown RBP11.36□□□□□ -0.59
SREBF1-213ENST00000485080 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.35□□□□□ -0.59
SREBF1-213ENST00000485080 PANO1I0J062 215 aa11.35□□□□□ -0.59
SREBF1-213ENST00000485080 SMR3BP02814 79 aaPredicted RBP11.35□□□□□ -0.59
SREBF1-213ENST00000485080 RNF151Q2KHN1 245 aa11.35□□□□□ -0.59
SREBF1-213ENST00000485080 ORAOV1Q8WV07 137 aa11.35□□□□□ -0.59
SREBF1-213ENST00000485080 CST9LQ9H4G1 147 aa11.35□□□□□ -0.59
SREBF1-213ENST00000485080 FAM229AH3BQW9 127 aa11.34□□□□□ -0.59
SREBF1-213ENST00000485080 TRGC2P03986 189 aa11.34□□□□□ -0.59
SREBF1-213ENST00000485080 PMVKQ15126 192 aa11.34□□□□□ -0.59
SREBF1-213ENST00000485080 PDZD11Q5EBL8 140 aa11.34□□□□□ -0.59
SREBF1-213ENST00000485080 SPACA4Q8TDM5 124 aa11.34□□□□□ -0.59
SREBF1-213ENST00000485080 CAMK2N2Q96S95 79 aa11.34□□□□□ -0.59
SREBF1-213ENST00000485080 KIAA0087Q14695 138 aa11.33□□□□□ -0.6
SREBF1-213ENST00000485080 Q5VSD8 79 aa11.33□□□□□ -0.6
SREBF1-213ENST00000485080 Q6ZRU5 148 aa11.33□□□□□ -0.6
SREBF1-213ENST00000485080 MRPL35Q9NZE8 188 aaKnown RBP11.33□□□□□ -0.6
SREBF1-213ENST00000485080 IGLV5-45A0A087WSX0 123 aa11.32□□□□□ -0.6
SREBF1-213ENST00000485080 TINCRA0A1B0GVN0 87 aa11.32□□□□□ -0.6
SREBF1-213ENST00000485080 GEMIN7Q9H840 131 aaKnown RBP11.32□□□□□ -0.6
SREBF1-213ENST00000485080 LINC00474Q9P2X8 69 aa11.32□□□□□ -0.6
SREBF1-213ENST00000485080 A0A0J9YXV3 536 aa11.31□□□□□ -0.6
SREBF1-213ENST00000485080 ATP5LO75964 103 aa11.31□□□□□ -0.6
SREBF1-213ENST00000485080 CDKN2A-AS1Q9UH64 79 aa11.31□□□□□ -0.6
SREBF1-213ENST00000485080 NDUFA1O15239 70 aa11.3□□□□□ -0.6
SREBF1-213ENST00000485080 CHTF8P0CG12 524 aa11.3□□□□□ -0.6
SREBF1-213ENST00000485080 LINC00528Q8N1L1 170 aa11.3□□□□□ -0.6
SREBF1-213ENST00000485080 PLAC8Q9NZF1 115 aa11.3□□□□□ -0.6
SREBF1-213ENST00000485080 LOC107984640A0A0U1RRK4 108 aa11.29□□□□□ -0.6
SREBF1-213ENST00000485080 PMCHL1Q16048 86 aa11.29□□□□□ -0.6
SREBF1-213ENST00000485080 A0A087WYN8 130 aa11.28□□□□□ -0.6
SREBF1-213ENST00000485080 A0A096LNI7 61 aa11.28□□□□□ -0.6
SREBF1-213ENST00000485080 BAGE3Q86Y29 109 aa11.28□□□□□ -0.6
SREBF1-213ENST00000485080 Q8IZM0 81 aa11.27□□□□□ -0.61
SREBF1-213ENST00000485080 PLA2G1BP04054 148 aaKnown RBP11.26□□□□□ -0.61
SREBF1-213ENST00000485080 TLX1NBP0CAT3 122 aa11.26□□□□□ -0.61
SREBF1-213ENST00000485080 IGLC3P0DOY3 106 aa11.26□□□□□ -0.61
SREBF1-213ENST00000485080 PTTG1IPP53801 180 aa11.26□□□□□ -0.61
SREBF1-213ENST00000485080 C10orf25Q5T742 122 aa11.26□□□□□ -0.61
SREBF1-213ENST00000485080 UNQ6190/PRO20217Q6UXQ8 127 aa11.26□□□□□ -0.61
SREBF1-213ENST00000485080 LINC00469Q8N7U9 141 aa11.26□□□□□ -0.61
SREBF1-213ENST00000485080 PACRGQ96M98 296 aaPredicted RBP11.26□□□□□ -0.61
SREBF1-213ENST00000485080 IGKV2-24A0A0C4DH68 120 aa11.25□□□□□ -0.61
SREBF1-213ENST00000485080 TRBV30A0A0K0K1B3 111 aa11.25□□□□□ -0.61
SREBF1-213ENST00000485080 HSBP1O75506 76 aa11.25□□□□□ -0.61
SREBF1-213ENST00000485080 SCO1O75880 301 aa11.25□□□□□ -0.61
SREBF1-213ENST00000485080 MAJINQ3KP22 176 aa11.25□□□□□ -0.61
SREBF1-213ENST00000485080 DPH3Q96FX2 82 aa11.25□□□□□ -0.61
SREBF1-213ENST00000485080 C6orf48Q9UBA6 75 aa11.25□□□□□ -0.61
SREBF1-213ENST00000485080 MYCBP2O75592 4640 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms