RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 SMIM2Q9BVW6 85 aa7.05□□□□□ -1.28
SCFD1-206ENST00000484733 MRPL35Q9NZE8 188 aaKnown RBP7.05□□□□□ -1.28
SCFD1-206ENST00000484733 IGHV3OR16-9A0A0B4J2B5 98 aa7.05□□□□□ -1.28
SCFD1-206ENST00000484733 F8W036 122 aa7.05□□□□□ -1.28
SCFD1-206ENST00000484733 A0A1B0GXF2 115 aa7.04□□□□□ -1.28
SCFD1-206ENST00000484733 PPBPP02775 128 aa7.04□□□□□ -1.28
SCFD1-206ENST00000484733 RPL39P62891 51 aaKnown RBP7.04□□□□□ -1.28
SCFD1-206ENST00000484733 TLX1NBP0CAT3 122 aa7.04□□□□□ -1.28
SCFD1-206ENST00000484733 HBBP68871 147 aa7.04□□□□□ -1.28
SCFD1-206ENST00000484733 PSORS1C2Q9UIG4 136 aa7.04□□□□□ -1.28
SCFD1-206ENST00000484733 RPL18AQ02543 176 aaKnown RBP7.03□□□□□ -1.28
SCFD1-206ENST00000484733 ORAOV1Q8WV07 137 aa7.03□□□□□ -1.28
SCFD1-206ENST00000484733 D6R8Y8 96 aa7.02□□□□□ -1.28
SCFD1-206ENST00000484733 MT-ND6P03923 174 aa7.02□□□□□ -1.28
SCFD1-206ENST00000484733 SRSF3P84103 164 aaKnown RBP7.02□□□□□ -1.28
SCFD1-206ENST00000484733 IMMP2LQ96T52 175 aa7.02□□□□□ -1.28
SCFD1-206ENST00000484733 OPRPNQ99935 248 aaPredicted RBP7.02□□□□□ -1.28
SCFD1-206ENST00000484733 NDUFA1O15239 70 aa7.02□□□□□ -1.29
SCFD1-206ENST00000484733 NPYP01303 97 aa7.02□□□□□ -1.29
SCFD1-206ENST00000484733 PYGO1Q9Y3Y4 419 aa7.02□□□□□ -1.29
SCFD1-206ENST00000484733 PRSS47A8MTI9 375 aa7.01□□□□□ -1.29
SCFD1-206ENST00000484733 ODF1Q14990 250 aa7.01□□□□□ -1.29
SCFD1-206ENST00000484733 MRPL54Q6P161 138 aaKnown RBP7.01□□□□□ -1.29
SCFD1-206ENST00000484733 PHF5AQ7RTV0 110 aaKnown RBP7.01□□□□□ -1.29
SCFD1-206ENST00000484733 ATP5L2Q7Z4Y8 100 aa7.01□□□□□ -1.29
SCFD1-206ENST00000484733 IFITM10A6NMD0 228 aa7.01□□□□□ -1.29
SCFD1-206ENST00000484733 LRP2P98164 4655 aa7□□□□□ -1.29
SCFD1-206ENST00000484733 C1orf137Q5JT78 98 aa7□□□□□ -1.29
SCFD1-206ENST00000484733 ORMDL3Q8N138 153 aa7□□□□□ -1.29
SCFD1-206ENST00000484733 LINC01561Q8N1V8 128 aa7□□□□□ -1.29
SCFD1-206ENST00000484733 A0A087WZ39 114 aa6.99□□□□□ -1.29
SCFD1-206ENST00000484733 KIAA0087Q14695 138 aa6.99□□□□□ -1.29
SCFD1-206ENST00000484733 C10orf25Q5T742 122 aa6.99□□□□□ -1.29
SCFD1-206ENST00000484733 C6orf48Q9UBA6 75 aa6.99□□□□□ -1.29
SCFD1-206ENST00000484733 TGIF2-C20orf24A0A0A6YYL0 155 aa6.99□□□□□ -1.29
SCFD1-206ENST00000484733 IGLV7-43P04211 117 aa6.99□□□□□ -1.29
SCFD1-206ENST00000484733 IFI27P40305 119 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-206ENST00000484733 UNQ6190/PRO20217Q6UXQ8 127 aa6.99□□□□□ -1.29
SCFD1-206ENST00000484733 TMEM136Q6ZRR5 245 aa6.99□□□□□ -1.29
SCFD1-206ENST00000484733 PRELID3AQ96N28 172 aa6.99□□□□□ -1.29
SCFD1-206ENST00000484733 RAB5AP20339 215 aa6.98□□□□□ -1.29
SCFD1-206ENST00000484733 DIRC1Q969H9 104 aa6.98□□□□□ -1.29
SCFD1-206ENST00000484733 LAMTOR2Q9Y2Q5 125 aa6.98□□□□□ -1.29
SCFD1-206ENST00000484733 IGLV4-3A0A075B6K6 122 aa6.98□□□□□ -1.29
SCFD1-206ENST00000484733 LINC00242Q5T6M2 205 aa6.98□□□□□ -1.29
SCFD1-206ENST00000484733 TRBV30A0A0K0K1B3 111 aa6.97□□□□□ -1.29
SCFD1-206ENST00000484733 A0A1B0GVG6 124 aa6.96□□□□□ -1.29
SCFD1-206ENST00000484733 TMEM141Q96I45 108 aa6.96□□□□□ -1.29
SCFD1-206ENST00000484733 FAM168BA1KXE4 195 aa6.96□□□□□ -1.3
SCFD1-206ENST00000484733 NPSP0C0P6 89 aa6.96□□□□□ -1.3
SCFD1-206ENST00000484733 H0Y9J4 135 aa6.95□□□□□ -1.3
SCFD1-206ENST00000484733 UBE2D1P51668 147 aa6.95□□□□□ -1.3
SCFD1-206ENST00000484733 KRTAP11-1Q8IUC1 163 aa6.95□□□□□ -1.3
SCFD1-206ENST00000484733 KRTAP7-1Q8IUC3 87 aa6.95□□□□□ -1.3
SCFD1-206ENST00000484733 TEX43Q6ZNM6 134 aa6.95□□□□□ -1.3
SCFD1-206ENST00000484733 Q8N8P6 123 aa6.95□□□□□ -1.3
SCFD1-206ENST00000484733 NDUFC2-KCTD14E9PQ53 114 aa6.94□□□□□ -1.3
SCFD1-206ENST00000484733 GAGE2EQ4V326 116 aa6.94□□□□□ -1.3
SCFD1-206ENST00000484733 FAM19A3Q7Z5A8 133 aa6.94□□□□□ -1.3
SCFD1-206ENST00000484733 AMELXQ99217 191 aa6.94□□□□□ -1.3
SCFD1-206ENST00000484733 MAP1LC3AQ9H492 121 aa6.94□□□□□ -1.3
SCFD1-206ENST00000484733 GAGE2DQ9UEU5 116 aa6.94□□□□□ -1.3
SCFD1-206ENST00000484733 K7EMI3 77 aa6.94□□□□□ -1.3
SCFD1-206ENST00000484733 FAM19A5Q7Z5A7 132 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-206ENST00000484733 C2orf88Q9BSF0 95 aa6.94□□□□□ -1.3
SCFD1-206ENST00000484733 IGLV1-50A0A075B6I6 118 aa6.93□□□□□ -1.3
SCFD1-206ENST00000484733 PNRC1Q12796 327 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-206ENST00000484733 ANAPC16Q96DE5 110 aa6.93□□□□□ -1.3
SCFD1-206ENST00000484733 PACRGQ96M98 296 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-206ENST00000484733 CYSLTR1Q9Y271 337 aa6.93□□□□□ -1.3
SCFD1-206ENST00000484733 C2orf66Q6UXQ4 117 aa6.93□□□□□ -1.3
SCFD1-206ENST00000484733 LINC00173Q6ZV60 143 aa6.93□□□□□ -1.3
SCFD1-206ENST00000484733 PRR26Q8N8Z3 221 aa6.93□□□□□ -1.3
SCFD1-206ENST00000484733 LOC389332A0A1B0GUA5 103 aa6.92□□□□□ -1.3
SCFD1-206ENST00000484733 M0QXV9 152 aa6.92□□□□□ -1.3
SCFD1-206ENST00000484733 ORMDL2Q53FV1 153 aa6.92□□□□□ -1.3
SCFD1-206ENST00000484733 C9orf129Q5T035 196 aaKnown RBP6.92□□□□□ -1.3
SCFD1-206ENST00000484733 C2orf82Q6UX34 121 aa6.92□□□□□ -1.3
SCFD1-206ENST00000484733 Q6ZN92 141 aa6.92□□□□□ -1.3
SCFD1-206ENST00000484733 MT-ND4LP03901 98 aa6.92□□□□□ -1.3
SCFD1-206ENST00000484733 VCX2Q9H322 139 aa6.92□□□□□ -1.3
SCFD1-206ENST00000484733 IGIPA6NJ69 53 aa6.91□□□□□ -1.3
SCFD1-206ENST00000484733 KRTAP1-4P0C5Y4 121 aa6.91□□□□□ -1.3
SCFD1-206ENST00000484733 UBE2BP63146 152 aa6.9□□□□□ -1.3
SCFD1-206ENST00000484733 Q8IZM0 81 aa6.9□□□□□ -1.3
SCFD1-206ENST00000484733 RNF213Q63HN8 5207 aa6.9□□□□□ -1.3
SCFD1-206ENST00000484733 PRSS2P07478 247 aa6.89□□□□□ -1.31
SCFD1-206ENST00000484733 G0S2P27469 103 aa6.89□□□□□ -1.31
SCFD1-206ENST00000484733 SEC11AP67812 179 aa6.89□□□□□ -1.31
SCFD1-206ENST00000484733 NXT2Q9NPJ8 142 aaKnown RBP6.89□□□□□ -1.31
SCFD1-206ENST00000484733 CARHSP1Q9Y2V2 147 aaKnown RBP6.89□□□□□ -1.31
SCFD1-206ENST00000484733 PAPPA-AS1Q5QFB9 102 aa6.89□□□□□ -1.31
SCFD1-206ENST00000484733 ZC2HC1BQ5TFG8 222 aa6.89□□□□□ -1.31
SCFD1-206ENST00000484733 NUPR1O60356 82 aa6.88□□□□□ -1.31
SCFD1-206ENST00000484733 CKS1BP61024 79 aa6.88□□□□□ -1.31
SCFD1-206ENST00000484733 HERVK_113P63121 156 aa6.88□□□□□ -1.31
SCFD1-206ENST00000484733 RPL13AP40429 203 aaKnown RBP6.88□□□□□ -1.31
SCFD1-206ENST00000484733 C6orf226Q5I0X4 101 aa6.88□□□□□ -1.31
SCFD1-206ENST00000484733 TIMM17AQ99595 171 aa6.88□□□□□ -1.31
SCFD1-206ENST00000484733 ZNF861PO60384 105 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms