RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 TRAV13-1A0A0B4J241 112 aa17.19■□□□□ 0.34
GTF3C4-202ENST00000483873 SERF1AO75920 110 aa17.19■□□□□ 0.34
GTF3C4-202ENST00000483873 HBDP02042 147 aa17.17■□□□□ 0.34
GTF3C4-202ENST00000483873 HIGD2BQ4VC39 106 aa17.17■□□□□ 0.34
GTF3C4-202ENST00000483873 C1orf196B1AJZ1 125 aa17.16■□□□□ 0.34
GTF3C4-202ENST00000483873 CD164L2Q6UWJ8 174 aa17.16■□□□□ 0.34
GTF3C4-202ENST00000483873 SCGB3A1Q96QR1 104 aa17.16■□□□□ 0.34
GTF3C4-202ENST00000483873 TIMM17AQ99595 171 aa17.16■□□□□ 0.34
GTF3C4-202ENST00000483873 NUPR1O60356 82 aa17.15■□□□□ 0.34
GTF3C4-202ENST00000483873 SLPIP03973 132 aa17.15■□□□□ 0.34
GTF3C4-202ENST00000483873 CFAP161Q6P656 301 aa17.15■□□□□ 0.34
GTF3C4-202ENST00000483873 Q6ZSA8 131 aa17.15■□□□□ 0.34
GTF3C4-202ENST00000483873 ERASQ7Z444 233 aa17.15■□□□□ 0.34
GTF3C4-202ENST00000483873 TMEM141Q96I45 108 aa17.15■□□□□ 0.34
GTF3C4-202ENST00000483873 LINC01549A6NIU2 74 aa17.14■□□□□ 0.33
GTF3C4-202ENST00000483873 HSBP1O75506 76 aa17.14■□□□□ 0.33
GTF3C4-202ENST00000483873 KRTAP4-5Q9BYR2 181 aa17.14■□□□□ 0.33
GTF3C4-202ENST00000483873 ABCA13Q86UQ4 5058 aa17.13■□□□□ 0.33
GTF3C4-202ENST00000483873 NPSP0C0P6 89 aa17.13■□□□□ 0.33
GTF3C4-202ENST00000483873 CNBPP62633 177 aaKnown RBP17.13■□□□□ 0.33
GTF3C4-202ENST00000483873 PDZD11Q5EBL8 140 aa17.13■□□□□ 0.33
GTF3C4-202ENST00000483873 ZC2HC1BQ5TFG8 222 aa17.13■□□□□ 0.33
GTF3C4-202ENST00000483873 FAM19A2Q8N3H0 131 aa17.13■□□□□ 0.33
GTF3C4-202ENST00000483873 C9orf163Q8N9P6 203 aa17.13■□□□□ 0.33
GTF3C4-202ENST00000483873 FAT1Q14517 4588 aa17.12■□□□□ 0.33
GTF3C4-202ENST00000483873 LINC00173Q6ZV60 143 aa17.12■□□□□ 0.33
GTF3C4-202ENST00000483873 Q8N1X5 172 aa17.12■□□□□ 0.33
GTF3C4-202ENST00000483873 GVQW2A0A096LPI5 108 aaPredicted RBP17.11■□□□□ 0.33
GTF3C4-202ENST00000483873 IFITM10A6NMD0 228 aa17.11■□□□□ 0.33
GTF3C4-202ENST00000483873 Q6ZN92 141 aa17.1■□□□□ 0.33
GTF3C4-202ENST00000483873 TEX43Q6ZNM6 134 aa17.1■□□□□ 0.33
GTF3C4-202ENST00000483873 AMELXQ99217 191 aa17.1■□□□□ 0.33
GTF3C4-202ENST00000483873 IGHV1-58A0A0C4DH39 117 aa17.09■□□□□ 0.33
GTF3C4-202ENST00000483873 SMR3BP02814 79 aaPredicted RBP17.08■□□□□ 0.32
GTF3C4-202ENST00000483873 LINC00526Q96FQ7 95 aa17.08■□□□□ 0.32
GTF3C4-202ENST00000483873 VCX2Q9H322 139 aa17.08■□□□□ 0.32
GTF3C4-202ENST00000483873 COX7A2LO14548 114 aa17.07■□□□□ 0.32
GTF3C4-202ENST00000483873 C5orf38Q86SI9 138 aa17.07■□□□□ 0.32
GTF3C4-202ENST00000483873 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.06■□□□□ 0.32
GTF3C4-202ENST00000483873 NDUFA6P56556 154 aa17.06■□□□□ 0.32
GTF3C4-202ENST00000483873 PAPPA-AS1Q5QFB9 102 aa17.06■□□□□ 0.32
GTF3C4-202ENST00000483873 COA6Q5JTJ3 125 aaKnown RBP17.05■□□□□ 0.32
GTF3C4-202ENST00000483873 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.04■□□□□ 0.32
GTF3C4-202ENST00000483873 MALP21145 153 aa17.04■□□□□ 0.32
GTF3C4-202ENST00000483873 SCXQ7RTU7 201 aa17.04■□□□□ 0.32
GTF3C4-202ENST00000483873 C2orf88Q9BSF0 95 aa17.04■□□□□ 0.32
GTF3C4-202ENST00000483873 UBE2D1P51668 147 aa17.04■□□□□ 0.32
GTF3C4-202ENST00000483873 SDIM1Q6ZPB5 146 aa17.04■□□□□ 0.32
GTF3C4-202ENST00000483873 ATP5LO75964 103 aa17.03■□□□□ 0.32
GTF3C4-202ENST00000483873 IGHV3OR16-9A0A0B4J2B5 98 aa17.02■□□□□ 0.31
GTF3C4-202ENST00000483873 CHAC1Q9BUX1 264 aa17.02■□□□□ 0.31
GTF3C4-202ENST00000483873 IGHV3-64A0A075B6Q5 118 aa17.01■□□□□ 0.31
GTF3C4-202ENST00000483873 PANO1I0J062 215 aa17■□□□□ 0.31
GTF3C4-202ENST00000483873 COX6A2Q02221 97 aa17■□□□□ 0.31
GTF3C4-202ENST00000483873 PMVKQ15126 192 aa17■□□□□ 0.31
GTF3C4-202ENST00000483873 LINC00242Q5T6M2 205 aa17■□□□□ 0.31
GTF3C4-202ENST00000483873 CST9LQ9H4G1 147 aa17■□□□□ 0.31
GTF3C4-202ENST00000483873 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17■□□□□ 0.31
GTF3C4-202ENST00000483873 ZNF561-AS1K7EIQ3 104 aa16.99■□□□□ 0.31
GTF3C4-202ENST00000483873 LEPROTL1O95214 131 aa16.99■□□□□ 0.31
GTF3C4-202ENST00000483873 IFI27L1Q96BM0 104 aa16.99■□□□□ 0.31
GTF3C4-202ENST00000483873 CIRBP-AS1Q8TBR5 109 aa16.98■□□□□ 0.31
GTF3C4-202ENST00000483873 IGLV4-69A0A075B6H9 119 aa16.97■□□□□ 0.31
GTF3C4-202ENST00000483873 EPM2AB3EWF7 344 aa16.97■□□□□ 0.31
GTF3C4-202ENST00000483873 FABP4P15090 132 aa16.97■□□□□ 0.31
GTF3C4-202ENST00000483873 Q5VSD8 79 aa16.97■□□□□ 0.31
GTF3C4-202ENST00000483873 FAM19A3Q7Z5A8 133 aa16.96■□□□□ 0.31
GTF3C4-202ENST00000483873 VPS13BQ7Z7G8 4022 aa16.96■□□□□ 0.31
GTF3C4-202ENST00000483873 APOMO95445 188 aa16.96■□□□□ 0.3
GTF3C4-202ENST00000483873 CHTF8P0CG12 524 aa16.96■□□□□ 0.3
GTF3C4-202ENST00000483873 CARD19Q96LW7 228 aa16.96■□□□□ 0.3
GTF3C4-202ENST00000483873 A0A0J9YXV3 536 aa16.95■□□□□ 0.3
GTF3C4-202ENST00000483873 SPAG11BQ08648 103 aa16.94■□□□□ 0.3
GTF3C4-202ENST00000483873 SYCNQ0VAF6 134 aa16.93■□□□□ 0.3
GTF3C4-202ENST00000483873 ORAOV1Q8WV07 137 aa16.93■□□□□ 0.3
GTF3C4-202ENST00000483873 HSPB8Q9UJY1 196 aa16.93■□□□□ 0.3
GTF3C4-202ENST00000483873 A0A087WZ39 114 aa16.91■□□□□ 0.3
GTF3C4-202ENST00000483873 Q6ZRU5 148 aa16.91■□□□□ 0.3
GTF3C4-202ENST00000483873 OR10D4PQ8NGN7 298 aa16.91■□□□□ 0.3
GTF3C4-202ENST00000483873 CIRBPQ14011 172 aaKnown RBP16.9■□□□□ 0.3
GTF3C4-202ENST00000483873 TRAV12-1A0A0B4J245 112 aa16.89■□□□□ 0.29
GTF3C4-202ENST00000483873 TINCRA0A1B0GVN0 87 aa16.89■□□□□ 0.29
GTF3C4-202ENST00000483873 HERVK_113P63121 156 aa16.89■□□□□ 0.29
GTF3C4-202ENST00000483873 SEC11AP67812 179 aa16.89■□□□□ 0.29
GTF3C4-202ENST00000483873 LINC00528Q8N1L1 170 aa16.89■□□□□ 0.29
GTF3C4-202ENST00000483873 CAMK2N2Q96S95 79 aa16.89■□□□□ 0.29
GTF3C4-202ENST00000483873 FAM229AH3BQW9 127 aa16.88■□□□□ 0.29
GTF3C4-202ENST00000483873 C2orf48Q96LS8 159 aa16.88■□□□□ 0.29
GTF3C4-202ENST00000483873 H0Y8G0 127 aa16.87■□□□□ 0.29
GTF3C4-202ENST00000483873 S100A6P06703 90 aa16.87■□□□□ 0.29
GTF3C4-202ENST00000483873 IGLC3P0DOY3 106 aa16.87■□□□□ 0.29
GTF3C4-202ENST00000483873 SPACA4Q8TDM5 124 aa16.87■□□□□ 0.29
GTF3C4-202ENST00000483873 PACRGQ96M98 296 aaPredicted RBP16.87■□□□□ 0.29
GTF3C4-202ENST00000483873 GEMIN7Q9H840 131 aaKnown RBP16.87■□□□□ 0.29
GTF3C4-202ENST00000483873 CDKN2A-AS1Q9UH64 79 aa16.87■□□□□ 0.29
GTF3C4-202ENST00000483873 CHTOPQ9Y3Y2 248 aaKnown RBP16.87■□□□□ 0.29
GTF3C4-202ENST00000483873 A0A096LNI7 61 aa16.86■□□□□ 0.29
GTF3C4-202ENST00000483873 IGKV2-24A0A0C4DH68 120 aa16.86■□□□□ 0.29
GTF3C4-202ENST00000483873 HIST3H2BBQ8N257 126 aa16.86■□□□□ 0.29
GTF3C4-202ENST00000483873 IGLV5-45A0A087WSX0 123 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms