RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 MRPL35Q9NZE8 188 aaKnown RBP13.29□□□□□ -0.28
TRAPPC12-220ENST00000482645 FAT2Q9NYQ8 4349 aa13.29□□□□□ -0.28
TRAPPC12-220ENST00000482645 IGLV4-69A0A075B6H9 119 aa13.28□□□□□ -0.28
TRAPPC12-220ENST00000482645 A0A0J9YXV3 536 aa13.28□□□□□ -0.28
TRAPPC12-220ENST00000482645 C20orf202A1L168 122 aa13.28□□□□□ -0.28
TRAPPC12-220ENST00000482645 F8VRH5 84 aa13.28□□□□□ -0.28
TRAPPC12-220ENST00000482645 SS18Q15532 418 aa13.28□□□□□ -0.28
TRAPPC12-220ENST00000482645 TNP2Q05952 138 aa13.27□□□□□ -0.29
TRAPPC12-220ENST00000482645 LINC01545Q5VT33 79 aa13.27□□□□□ -0.29
TRAPPC12-220ENST00000482645 CHAC1Q9BUX1 264 aa13.27□□□□□ -0.29
TRAPPC12-220ENST00000482645 CTAG1AP78358 180 aa13.26□□□□□ -0.29
TRAPPC12-220ENST00000482645 COX11Q9Y6N1 276 aa13.26□□□□□ -0.29
TRAPPC12-220ENST00000482645 TRAV8-4A0A0B4J246 113 aa13.25□□□□□ -0.29
TRAPPC12-220ENST00000482645 CCL25O15444 150 aa13.25□□□□□ -0.29
TRAPPC12-220ENST00000482645 IGLC3P0DOY3 106 aa13.25□□□□□ -0.29
TRAPPC12-220ENST00000482645 XCL1P47992 114 aa13.25□□□□□ -0.29
TRAPPC12-220ENST00000482645 LINC00242Q5T6M2 205 aa13.25□□□□□ -0.29
TRAPPC12-220ENST00000482645 LINC00336Q6ZUF6 198 aa13.25□□□□□ -0.29
TRAPPC12-220ENST00000482645 CHCHD10Q8WYQ3 142 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC12-220ENST00000482645 SCGB1D1O95968 90 aa13.24□□□□□ -0.29
TRAPPC12-220ENST00000482645 GEMIN7Q9H840 131 aaKnown RBP13.24□□□□□ -0.29
TRAPPC12-220ENST00000482645 C11orf86A6NJI1 115 aa13.23□□□□□ -0.29
TRAPPC12-220ENST00000482645 DPM2O94777 84 aa13.23□□□□□ -0.29
TRAPPC12-220ENST00000482645 TINCRA0A1B0GVN0 87 aa13.23□□□□□ -0.29
TRAPPC12-220ENST00000482645 LECT2O14960 151 aa13.23□□□□□ -0.29
TRAPPC12-220ENST00000482645 PLNP26678 52 aa13.23□□□□□ -0.29
TRAPPC12-220ENST00000482645 MAPKAPK5-AS1Q8N8E1 139 aa13.23□□□□□ -0.29
TRAPPC12-220ENST00000482645 GAGE12HA6NDE8 117 aa13.22□□□□□ -0.29
TRAPPC12-220ENST00000482645 IGKCP01834 107 aa13.22□□□□□ -0.29
TRAPPC12-220ENST00000482645 HERVK_113P63121 156 aa13.22□□□□□ -0.29
TRAPPC12-220ENST00000482645 SEC11AP67812 179 aa13.22□□□□□ -0.29
TRAPPC12-220ENST00000482645 COX6A2Q02221 97 aa13.22□□□□□ -0.29
TRAPPC12-220ENST00000482645 FAM19A3Q7Z5A8 133 aa13.22□□□□□ -0.29
TRAPPC12-220ENST00000482645 ATOH7Q8N100 152 aa13.22□□□□□ -0.29
TRAPPC12-220ENST00000482645 LINC00469Q8N7U9 141 aa13.21□□□□□ -0.29
TRAPPC12-220ENST00000482645 KRTAP26-1Q6PEX3 210 aa13.2□□□□□ -0.3
TRAPPC12-220ENST00000482645 JOSD1Q15040 202 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC12-220ENST00000482645 TMEM170BQ5T4T1 132 aa13.19□□□□□ -0.3
TRAPPC12-220ENST00000482645 A0A087WTM6 91 aa13.18□□□□□ -0.3
TRAPPC12-220ENST00000482645 ZNF22P17026 224 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC12-220ENST00000482645 PYY3Q5JQD4 70 aa13.18□□□□□ -0.3
TRAPPC12-220ENST00000482645 CD164L2Q6UWJ8 174 aa13.18□□□□□ -0.3
TRAPPC12-220ENST00000482645 CDKN2A-AS1Q9UH64 79 aa13.18□□□□□ -0.3
TRAPPC12-220ENST00000482645 FOXI1Q12951 378 aa13.18□□□□□ -0.3
TRAPPC12-220ENST00000482645 WFDC2Q14508 124 aa13.18□□□□□ -0.3
TRAPPC12-220ENST00000482645 IGLV5-45A0A087WSX0 123 aa13.17□□□□□ -0.3
TRAPPC12-220ENST00000482645 LRCOL1A6NCL2 159 aa13.17□□□□□ -0.3
TRAPPC12-220ENST00000482645 C5orf38Q86SI9 138 aa13.17□□□□□ -0.3
TRAPPC12-220ENST00000482645 IGHV3OR16-9A0A0B4J2B5 98 aa13.16□□□□□ -0.3
TRAPPC12-220ENST00000482645 EREGO14944 169 aa13.16□□□□□ -0.3
TRAPPC12-220ENST00000482645 H3BRM9 83 aa13.15□□□□□ -0.3
TRAPPC12-220ENST00000482645 PKD1P98161 4303 aa13.15□□□□□ -0.3
TRAPPC12-220ENST00000482645 DNAH11Q96DT5 4516 aa13.15□□□□□ -0.3
TRAPPC12-220ENST00000482645 COX7A2LO14548 114 aa13.14□□□□□ -0.31
TRAPPC12-220ENST00000482645 SPINK8P0C7L1 97 aa13.14□□□□□ -0.31
TRAPPC12-220ENST00000482645 HECTD4Q9Y4D8 3996 aa13.14□□□□□ -0.31
TRAPPC12-220ENST00000482645 USP17L23D6RBM5 183 aa13.13□□□□□ -0.31
TRAPPC12-220ENST00000482645 IGHV3-64A0A075B6Q5 118 aa13.13□□□□□ -0.31
TRAPPC12-220ENST00000482645 hDV102S1A0JD36 115 aa13.13□□□□□ -0.31
TRAPPC12-220ENST00000482645 MALP21145 153 aa13.13□□□□□ -0.31
TRAPPC12-220ENST00000482645 CDPF1Q6NVV7 123 aa13.13□□□□□ -0.31
TRAPPC12-220ENST00000482645 A0A087WZ39 114 aa13.12□□□□□ -0.31
TRAPPC12-220ENST00000482645 FUSP35637 526 aaKnown RBP eCLIP13.12□□□□□ -0.31
TRAPPC12-220ENST00000482645 MAJINQ3KP22 176 aa13.12□□□□□ -0.31
TRAPPC12-220ENST00000482645 STPG4Q8N801 248 aa13.12□□□□□ -0.31
TRAPPC12-220ENST00000482645 Q8N814 137 aa13.12□□□□□ -0.31
TRAPPC12-220ENST00000482645 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC12-220ENST00000482645 TMEM223A0PJW6 202 aa13.11□□□□□ -0.31
TRAPPC12-220ENST00000482645 A0A1B0GVY2 172 aa13.1□□□□□ -0.31
TRAPPC12-220ENST00000482645 SMIM1B2RUZ4 78 aa13.1□□□□□ -0.31
TRAPPC12-220ENST00000482645 HERVK_113P61574 105 aa13.1□□□□□ -0.31
TRAPPC12-220ENST00000482645 SMIM6P0DI80 62 aa13.09□□□□□ -0.31
TRAPPC12-220ENST00000482645 PKHD1P08F94 4074 aa13.09□□□□□ -0.31
TRAPPC12-220ENST00000482645 HSBP1L1C9JCN9 74 aa13.08□□□□□ -0.31
TRAPPC12-220ENST00000482645 KRTAP10-2P60368 255 aa13.08□□□□□ -0.32
TRAPPC12-220ENST00000482645 HIGD2BQ4VC39 106 aa13.08□□□□□ -0.32
TRAPPC12-220ENST00000482645 C14orf177Q52M58 125 aa13.08□□□□□ -0.32
TRAPPC12-220ENST00000482645 C15orf56Q8N910 161 aa13.08□□□□□ -0.32
TRAPPC12-220ENST00000482645 APOMO95445 188 aa13.07□□□□□ -0.32
TRAPPC12-220ENST00000482645 S100A12P80511 92 aa13.07□□□□□ -0.32
TRAPPC12-220ENST00000482645 CFAP161Q6P656 301 aa13.07□□□□□ -0.32
TRAPPC12-220ENST00000482645 ORAOV1Q8WV07 137 aa13.07□□□□□ -0.32
TRAPPC12-220ENST00000482645 VAMP8Q9BV40 100 aa13.07□□□□□ -0.32
TRAPPC12-220ENST00000482645 ANKRD39Q53RE8 183 aa13.06□□□□□ -0.32
TRAPPC12-220ENST00000482645 LINC01561Q8N1V8 128 aa13.06□□□□□ -0.32
TRAPPC12-220ENST00000482645 PAM16Q9Y3D7 125 aa13.06□□□□□ -0.32
TRAPPC12-220ENST00000482645 EPPK1P58107 5090 aaKnown RBP13.06□□□□□ -0.32
TRAPPC12-220ENST00000482645 IGHV1-58A0A0C4DH39 117 aa13.05□□□□□ -0.32
TRAPPC12-220ENST00000482645 TOMM7Q9P0U1 55 aa13.05□□□□□ -0.32
TRAPPC12-220ENST00000482645 E9PLD3 99 aa13.04□□□□□ -0.32
TRAPPC12-220ENST00000482645 IGLV5-39A0A0G2JS06 123 aa13.03□□□□□ -0.32
TRAPPC12-220ENST00000482645 SPAG11BQ08648 103 aa13.03□□□□□ -0.32
TRAPPC12-220ENST00000482645 IGKV2D-26A0A0A0MRZ7 120 aa13.03□□□□□ -0.32
TRAPPC12-220ENST00000482645 IGLV5-52A0A0A0MRZ9 124 aa13.03□□□□□ -0.32
TRAPPC12-220ENST00000482645 NMUP48645 174 aa13.03□□□□□ -0.32
TRAPPC12-220ENST00000482645 LINC00526Q96FQ7 95 aa13.03□□□□□ -0.32
TRAPPC12-220ENST00000482645 DNAH5Q8TE73 4624 aa13.02□□□□□ -0.32
TRAPPC12-220ENST00000482645 LEPROTO15243 131 aa13.02□□□□□ -0.33
TRAPPC12-220ENST00000482645 TSPEAR-AS2P59090 65 aa13.02□□□□□ -0.33
TRAPPC12-220ENST00000482645 SPATA45Q537H7 98 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 269.2 ms