RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 TMEM14EPQ6UXP3 125 aa4.27□□□□□ -1.73
CLK1-212ENST00000482590 HIST1H2BHQ93079 126 aa4.27□□□□□ -1.73
CLK1-212ENST00000482590 HIST1H2BNQ99877 126 aa4.27□□□□□ -1.73
CLK1-212ENST00000482590 HIST1H2BMQ99879 126 aa4.27□□□□□ -1.73
CLK1-212ENST00000482590 UPK3BQ9BT76 320 aa4.27□□□□□ -1.73
CLK1-212ENST00000482590 OTORQ9NRC9 128 aa4.27□□□□□ -1.73
CLK1-212ENST00000482590 ZNF586Q9NXT0 402 aa4.27□□□□□ -1.73
CLK1-212ENST00000482590 TRGV2A0A075B6R0 118 aa4.26□□□□□ -1.73
CLK1-212ENST00000482590 TRAV12-3A0A0B4J271 114 aa4.26□□□□□ -1.73
CLK1-212ENST00000482590 J3QR89 54 aa4.26□□□□□ -1.73
CLK1-212ENST00000482590 NDUFB6O95139 128 aa4.26□□□□□ -1.73
CLK1-212ENST00000482590 NTF3P20783 257 aa4.26□□□□□ -1.73
CLK1-212ENST00000482590 ATP6V0CP27449 155 aa4.26□□□□□ -1.73
CLK1-212ENST00000482590 C10orf113Q5VZT2 155 aa4.26□□□□□ -1.73
CLK1-212ENST00000482590 PATE2Q6UY27 113 aa4.26□□□□□ -1.73
CLK1-212ENST00000482590 LINC00612Q8N6U2 182 aa4.26□□□□□ -1.73
CLK1-212ENST00000482590 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
CLK1-212ENST00000482590 NIT2Q9NQR4 276 aa4.26□□□□□ -1.73
CLK1-212ENST00000482590 NAT8Q9UHE5 227 aa4.26□□□□□ -1.73
CLK1-212ENST00000482590 DMBT1Q9UGM3 2413 aaPredicted RBP4.25□□□□□ -1.73
CLK1-212ENST00000482590 HERC1Q15751 4861 aa4.25□□□□□ -1.73
CLK1-212ENST00000482590 C7orf71A4D174 169 aa4.25□□□□□ -1.73
CLK1-212ENST00000482590 H3BNG1 76 aa4.25□□□□□ -1.73
CLK1-212ENST00000482590 TAX1BP3O14907 124 aa4.25□□□□□ -1.73
CLK1-212ENST00000482590 GPX1P07203 203 aa4.25□□□□□ -1.73
CLK1-212ENST00000482590 TLX1NBP0CAT3 122 aa4.25□□□□□ -1.73
CLK1-212ENST00000482590 IGLC2P0DOY2 106 aa4.25□□□□□ -1.73
CLK1-212ENST00000482590 RPL35P42766 123 aaKnown RBP4.25□□□□□ -1.73
CLK1-212ENST00000482590 LINC00315P59091 139 aa4.25□□□□□ -1.73
CLK1-212ENST00000482590 ZNF846Q147U1 533 aa4.25□□□□□ -1.73
CLK1-212ENST00000482590 ESRGQ1W209 222 aa4.25□□□□□ -1.73
CLK1-212ENST00000482590 Q6ZTI0 123 aa4.25□□□□□ -1.73
CLK1-212ENST00000482590 LINC01551Q86U37 167 aa4.25□□□□□ -1.73
CLK1-212ENST00000482590 OR5C1Q8NGR4 320 aa4.25□□□□□ -1.73
CLK1-212ENST00000482590 LINC00479Q96M42 142 aa4.25□□□□□ -1.73
CLK1-212ENST00000482590 ODF3Q96PU9 254 aa4.25□□□□□ -1.73
CLK1-212ENST00000482590 MGST2Q99735 147 aa4.25□□□□□ -1.73
CLK1-212ENST00000482590 TRGV1A0A0A0MS02 117 aa4.24□□□□□ -1.73
CLK1-212ENST00000482590 TRBV7-6A0A0J9YX20 115 aa4.24□□□□□ -1.73
CLK1-212ENST00000482590 LOC107984640A0A0U1RRK4 108 aa4.24□□□□□ -1.73
CLK1-212ENST00000482590 UBE2L5PA0A1B0GUS4 154 aa4.24□□□□□ -1.73
CLK1-212ENST00000482590 C7orf66A4D0T2 115 aa4.24□□□□□ -1.73
CLK1-212ENST00000482590 M0R378 163 aa4.24□□□□□ -1.73
CLK1-212ENST00000482590 ZNF324O75467 553 aaPredicted RBP4.24□□□□□ -1.73
CLK1-212ENST00000482590 SLC25A5P05141 298 aaKnown RBP4.24□□□□□ -1.73
CLK1-212ENST00000482590 AKR1D1P51857 326 aa4.24□□□□□ -1.73
CLK1-212ENST00000482590 FAM104BQ5XKR9 115 aa4.24□□□□□ -1.73
CLK1-212ENST00000482590 NTM-AS1Q6ZSK4 140 aa4.24□□□□□ -1.73
CLK1-212ENST00000482590 PCP2Q8IVA1 136 aa4.24□□□□□ -1.73
CLK1-212ENST00000482590 Q8N976 141 aa4.24□□□□□ -1.73
CLK1-212ENST00000482590 AP1S3Q96PC3 154 aa4.24□□□□□ -1.73
CLK1-212ENST00000482590 FUT9Q9Y231 359 aa4.24□□□□□ -1.73
CLK1-212ENST00000482590 ICOSQ9Y6W8 199 aa4.24□□□□□ -1.73
CLK1-212ENST00000482590 FAT1Q14517 4588 aa4.24□□□□□ -1.73
CLK1-212ENST00000482590 A0A096LPF7 62 aa4.23□□□□□ -1.73
CLK1-212ENST00000482590 H7C423 109 aa4.23□□□□□ -1.73
CLK1-212ENST00000482590 M0R3E3 92 aa4.23□□□□□ -1.73
CLK1-212ENST00000482590 HLA-DQA1P01909 254 aa4.23□□□□□ -1.73
CLK1-212ENST00000482590 LINC00694P0DN24 101 aa4.23□□□□□ -1.73
CLK1-212ENST00000482590 S100A10P60903 97 aa4.23□□□□□ -1.73
CLK1-212ENST00000482590 MIC13Q5XKP0 118 aa4.23□□□□□ -1.73
CLK1-212ENST00000482590 C10orf126Q8N4M7 172 aa4.23□□□□□ -1.73
CLK1-212ENST00000482590 ZNF431Q8TF32 576 aaPredicted RBP4.23□□□□□ -1.73
CLK1-212ENST00000482590 CST9LQ9H4G1 147 aa4.23□□□□□ -1.73
CLK1-212ENST00000482590 ZFP30Q9Y2G7 519 aa4.23□□□□□ -1.73
CLK1-212ENST00000482590 TIMM9Q9Y5J7 89 aa4.23□□□□□ -1.73
CLK1-212ENST00000482590 FAM24AA6NFZ4 105 aa4.22□□□□□ -1.73
CLK1-212ENST00000482590 H3BQ15 152 aa4.22□□□□□ -1.73
CLK1-212ENST00000482590 CST7O76096 145 aa4.22□□□□□ -1.73
CLK1-212ENST00000482590 NCR2O95944 276 aa4.22□□□□□ -1.73
CLK1-212ENST00000482590 IGHV3-53P01767 116 aa4.22□□□□□ -1.73
CLK1-212ENST00000482590 MT-ND4LP03901 98 aa4.22□□□□□ -1.73
CLK1-212ENST00000482590 IGLC6P0CF74 106 aa4.22□□□□□ -1.73
CLK1-212ENST00000482590 PDE6HQ13956 83 aa4.22□□□□□ -1.73
CLK1-212ENST00000482590 DAND5Q8N907 189 aa4.22□□□□□ -1.73
CLK1-212ENST00000482590 PSMG3Q9BT73 122 aaPredicted RBP4.22□□□□□ -1.73
CLK1-212ENST00000482590 DERL1Q9BUN8 251 aa4.22□□□□□ -1.73
CLK1-212ENST00000482590 SLC39A9Q9NUM3 307 aa4.22□□□□□ -1.73
CLK1-212ENST00000482590 IL36BQ9NZH7 164 aa4.22□□□□□ -1.73
CLK1-212ENST00000482590 PHLDA3Q9Y5J5 127 aa4.22□□□□□ -1.73
CLK1-212ENST00000482590 A0A1B0GVG6 124 aa4.21□□□□□ -1.74
CLK1-212ENST00000482590 K7ERS5 55 aa4.21□□□□□ -1.74
CLK1-212ENST00000482590 SPINK4O60575 86 aa4.21□□□□□ -1.74
CLK1-212ENST00000482590 PYYP10082 97 aa4.21□□□□□ -1.74
CLK1-212ENST00000482590 IL7P13232 177 aa4.21□□□□□ -1.74
CLK1-212ENST00000482590 FGF7P21781 194 aa4.21□□□□□ -1.74
CLK1-212ENST00000482590 RNASE4P34096 147 aaKnown RBP4.21□□□□□ -1.74
CLK1-212ENST00000482590 RAB5CP51148 216 aa4.21□□□□□ -1.74
CLK1-212ENST00000482590 Q6ZRN7 208 aaPredicted RBP4.21□□□□□ -1.74
CLK1-212ENST00000482590 AMN1Q8IY45 258 aa4.21□□□□□ -1.74
CLK1-212ENST00000482590 CIRBP-AS1Q8TBR5 109 aa4.21□□□□□ -1.74
CLK1-212ENST00000482590 HIST1H2BAQ96A08 127 aa4.21□□□□□ -1.74
CLK1-212ENST00000482590 VGLL1Q99990 258 aa4.21□□□□□ -1.74
CLK1-212ENST00000482590 LINC00467Q9BRT7 94 aa4.21□□□□□ -1.74
CLK1-212ENST00000482590 TMEM14CQ9P0S9 112 aa4.21□□□□□ -1.74
CLK1-212ENST00000482590 PRO0255Q9UI72 69 aa4.21□□□□□ -1.74
CLK1-212ENST00000482590 LY96Q9Y6Y9 160 aa4.21□□□□□ -1.74
CLK1-212ENST00000482590 MYCBP2O75592 4640 aa4.21□□□□□ -1.74
CLK1-212ENST00000482590 IGKV2-40A0A087WW87 121 aaPredicted RBP4.2□□□□□ -1.74
CLK1-212ENST00000482590 TRGV4A0A0C4DH28 118 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms