RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 NDUFA1O15239 70 aa9.18□□□□□ -0.94
VPS52-218ENST00000482399 WFDC10AQ9H1F0 79 aa9.18□□□□□ -0.94
VPS52-218ENST00000482399 C6orf226Q5I0X4 101 aa9.18□□□□□ -0.94
VPS52-218ENST00000482399 CITED2Q99967 270 aaPredicted RBP9.18□□□□□ -0.94
VPS52-218ENST00000482399 TMEM243Q9BU79 118 aa9.18□□□□□ -0.94
VPS52-218ENST00000482399 PRB1P04280 392 aa9.17□□□□□ -0.94
VPS52-218ENST00000482399 PLA2G2AP14555 144 aa9.17□□□□□ -0.94
VPS52-218ENST00000482399 SDIM1Q6ZPB5 146 aa9.17□□□□□ -0.94
VPS52-218ENST00000482399 FLNAP21333 2647 aaKnown RBP9.17□□□□□ -0.94
VPS52-218ENST00000482399 SOSTDC1Q6X4U4 206 aa9.16□□□□□ -0.94
VPS52-218ENST00000482399 LECT2O14960 151 aa9.16□□□□□ -0.94
VPS52-218ENST00000482399 XCL1P47992 114 aa9.16□□□□□ -0.94
VPS52-218ENST00000482399 KLK5Q9Y337 293 aaPredicted RBP9.16□□□□□ -0.94
VPS52-218ENST00000482399 NIPBLQ6KC79 2804 aaeCLIP9.16□□□□□ -0.94
VPS52-218ENST00000482399 PPDPFQ9H3Y8 114 aa9.15□□□□□ -0.94
VPS52-218ENST00000482399 M0QXV9 152 aa9.15□□□□□ -0.94
VPS52-218ENST00000482399 SMIM1B2RUZ4 78 aa9.15□□□□□ -0.95
VPS52-218ENST00000482399 K7EQD1 137 aa9.15□□□□□ -0.95
VPS52-218ENST00000482399 TIRAPP58753 221 aa9.15□□□□□ -0.95
VPS52-218ENST00000482399 IGSF10Q6WRI0 2623 aa9.14□□□□□ -0.95
VPS52-218ENST00000482399 TMEM89A2RUT3 159 aa9.14□□□□□ -0.95
VPS52-218ENST00000482399 ZNF702PQ9H963 129 aa9.14□□□□□ -0.95
VPS52-218ENST00000482399 FAM218AQ96MZ4 157 aa9.13□□□□□ -0.95
VPS52-218ENST00000482399 ESM1Q9NQ30 184 aa9.13□□□□□ -0.95
VPS52-218ENST00000482399 INAFM2P0DMQ5 153 aa9.13□□□□□ -0.95
VPS52-218ENST00000482399 FAM104AQ969W3 186 aa9.13□□□□□ -0.95
VPS52-218ENST00000482399 DNAJC30Q96LL9 226 aa9.13□□□□□ -0.95
VPS52-218ENST00000482399 DEFB114Q30KQ6 69 aa9.12□□□□□ -0.95
VPS52-218ENST00000482399 NCR3O14931 201 aa9.12□□□□□ -0.95
VPS52-218ENST00000482399 IGLV10-54A0A075B6I4 117 aa9.11□□□□□ -0.95
VPS52-218ENST00000482399 TRAV13-2A0A0B4J235 113 aa9.11□□□□□ -0.95
VPS52-218ENST00000482399 COX7B2Q8TF08 81 aa9.11□□□□□ -0.95
VPS52-218ENST00000482399 MALP21145 153 aa9.11□□□□□ -0.95
VPS52-218ENST00000482399 HIST2H2BCQ6DN03 193 aa9.11□□□□□ -0.95
VPS52-218ENST00000482399 LINC00643Q86TS7 51 aa9.11□□□□□ -0.95
VPS52-218ENST00000482399 A0A087WVE0 104 aa9.1□□□□□ -0.95
VPS52-218ENST00000482399 NTM-AS1Q6ZSK4 140 aa9.1□□□□□ -0.95
VPS52-218ENST00000482399 Q96MF0 132 aa9.1□□□□□ -0.95
VPS52-218ENST00000482399 ODF3L2Q3SX64 289 aa9.1□□□□□ -0.95
VPS52-218ENST00000482399 A0A1B0GX51 115 aa9.09□□□□□ -0.95
VPS52-218ENST00000482399 HTN3P15516 51 aa9.09□□□□□ -0.95
VPS52-218ENST00000482399 Q6Q795 121 aa9.09□□□□□ -0.95
VPS52-218ENST00000482399 C11orf72Q8NBR9 251 aa9.09□□□□□ -0.95
VPS52-218ENST00000482399 A0A087WYN8 130 aa9.09□□□□□ -0.95
VPS52-218ENST00000482399 ACYP1P07311 99 aa9.09□□□□□ -0.95
VPS52-218ENST00000482399 SMCR5Q8TEV8 140 aa9.09□□□□□ -0.95
VPS52-218ENST00000482399 CDC42SE2Q9NRR3 84 aa9.09□□□□□ -0.95
VPS52-218ENST00000482399 ITPR3Q14573 2671 aa9.09□□□□□ -0.95
VPS52-218ENST00000482399 C1orf158Q8N1D5 194 aa9.08□□□□□ -0.96
VPS52-218ENST00000482399 SMIM11BQ8TCY0 68 aa9.08□□□□□ -0.96
VPS52-218ENST00000482399 hADV29S1A0JD25 119 aa9.08□□□□□ -0.96
VPS52-218ENST00000482399 CCL24O00175 119 aa9.08□□□□□ -0.96
VPS52-218ENST00000482399 TIMM17BO60830 172 aa9.08□□□□□ -0.96
VPS52-218ENST00000482399 PRR3P79522 188 aaKnown RBP9.08□□□□□ -0.96
VPS52-218ENST00000482399 LINC00337Q8N6G1 96 aa9.08□□□□□ -0.96
VPS52-218ENST00000482399 LOC107984640A0A0U1RRK4 108 aa9.07□□□□□ -0.96
VPS52-218ENST00000482399 DSCR9P59020 149 aa9.07□□□□□ -0.96
VPS52-218ENST00000482399 IGLV4-60A0A075B6I1 120 aa9.07□□□□□ -0.96
VPS52-218ENST00000482399 Q6YL49 198 aa9.07□□□□□ -0.96
VPS52-218ENST00000482399 WFDC9Q8NEX5 89 aa9.07□□□□□ -0.96
VPS52-218ENST00000482399 DEFB4AO15263 64 aa9.06□□□□□ -0.96
VPS52-218ENST00000482399 TMEM86BQ8N661 226 aa9.06□□□□□ -0.96
VPS52-218ENST00000482399 KRTAP10-9P60411 292 aa9.06□□□□□ -0.96
VPS52-218ENST00000482399 FAM110AQ9BQ89 295 aa9.06□□□□□ -0.96
VPS52-218ENST00000482399 FAM240AA0A1B0GVK7 77 aa9.06□□□□□ -0.96
VPS52-218ENST00000482399 TRACP01848 142 aa9.05□□□□□ -0.96
VPS52-218ENST00000482399 CCL18P55774 89 aa9.05□□□□□ -0.96
VPS52-218ENST00000482399 C3orf22Q8N5N4 141 aa9.04□□□□□ -0.96
VPS52-218ENST00000482399 IGLV5-39A0A0G2JS06 123 aa9.03□□□□□ -0.96
VPS52-218ENST00000482399 WFDC11Q8NEX6 87 aa9.03□□□□□ -0.96
VPS52-218ENST00000482399 S100A7L2Q5SY68 101 aa9.03□□□□□ -0.96
VPS52-218ENST00000482399 C4orf3Q8WVX3 66 aa9.03□□□□□ -0.96
VPS52-218ENST00000482399 TRBV10-1A0A0K0K1A3 114 aa9.03□□□□□ -0.96
VPS52-218ENST00000482399 J3QLI3 93 aa9.03□□□□□ -0.96
VPS52-218ENST00000482399 IGHV4-31P0DP07 118 aa9.03□□□□□ -0.96
VPS52-218ENST00000482399 C9orf129Q5T035 196 aaKnown RBP9.03□□□□□ -0.96
VPS52-218ENST00000482399 LINC00526Q96FQ7 95 aa9.03□□□□□ -0.96
VPS52-218ENST00000482399 LAMTOR3Q9UHA4 124 aa9.02□□□□□ -0.97
VPS52-218ENST00000482399 GYPEP15421 78 aa9.02□□□□□ -0.97
VPS52-218ENST00000482399 RNF152Q8N8N0 203 aa9.02□□□□□ -0.97
VPS52-218ENST00000482399 F8P00451 2351 aa9.02□□□□□ -0.97
VPS52-218ENST00000482399 UQCRQO14949 82 aa9.02□□□□□ -0.97
VPS52-218ENST00000482399 SETXQ7Z333 2677 aaKnown RBP9.01□□□□□ -0.97
VPS52-218ENST00000482399 TRAV23DV6A0A075B6W5 121 aa9.01□□□□□ -0.97
VPS52-218ENST00000482399 BEAN1Q3B7T3 259 aa9.01□□□□□ -0.97
VPS52-218ENST00000482399 TMEM126AQ9H061 195 aa9.01□□□□□ -0.97
VPS52-218ENST00000482399 TRBV7-7A0A0K0K1E9 115 aa9.01□□□□□ -0.97
VPS52-218ENST00000482399 SS18Q15532 418 aa9□□□□□ -0.97
VPS52-218ENST00000482399 PRORYQ9H606 182 aa9□□□□□ -0.97
VPS52-218ENST00000482399 LINC00846Q9NV44 126 aa9□□□□□ -0.97
VPS52-218ENST00000482399 ORMDL1Q9P0S3 153 aa9□□□□□ -0.97
VPS52-218ENST00000482399 ANGP03950 147 aaKnown RBP9□□□□□ -0.97
VPS52-218ENST00000482399 CXCL5P42830 114 aa9□□□□□ -0.97
VPS52-218ENST00000482399 HAMPP81172 84 aa9□□□□□ -0.97
VPS52-218ENST00000482399 IGLV5-45A0A087WSX0 123 aa8.99□□□□□ -0.97
VPS52-218ENST00000482399 C9orf116Q5BN46 136 aaPredicted RBP8.99□□□□□ -0.97
VPS52-218ENST00000482399 H0YGX0 51 aa8.98□□□□□ -0.97
VPS52-218ENST00000482399 PF4P02776 101 aa8.98□□□□□ -0.97
VPS52-218ENST00000482399 IGKV2-28A0A075B6P5 120 aa8.98□□□□□ -0.97
VPS52-218ENST00000482399 TRBV6-8A0A0A6YYG3 113 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms