RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 RYR1P21817 5038 aa13.26□□□□□ -0.29
VARS-224ENST00000479051 AMELXQ99217 191 aa13.25□□□□□ -0.29
VARS-224ENST00000479051 APOBP04114 4563 aaKnown RBP13.24□□□□□ -0.29
VARS-224ENST00000479051 SLPIP03973 132 aa13.24□□□□□ -0.29
VARS-224ENST00000479051 LINC00614P0C842 121 aa13.24□□□□□ -0.29
VARS-224ENST00000479051 IGHV3OR16-9A0A0B4J2B5 98 aa13.23□□□□□ -0.29
VARS-224ENST00000479051 UBE2D1P51668 147 aa13.23□□□□□ -0.29
VARS-224ENST00000479051 Q8N1X5 172 aa13.23□□□□□ -0.29
VARS-224ENST00000479051 SEC11AP67812 179 aa13.22□□□□□ -0.29
VARS-224ENST00000479051 LINC00242Q5T6M2 205 aa13.22□□□□□ -0.29
VARS-224ENST00000479051 LINC00173Q6ZV60 143 aa13.22□□□□□ -0.29
VARS-224ENST00000479051 PKIGQ9Y2B9 76 aa13.22□□□□□ -0.29
VARS-224ENST00000479051 HSPG2P98160 4391 aa13.22□□□□□ -0.29
VARS-224ENST00000479051 HAMPP81172 84 aa13.21□□□□□ -0.29
VARS-224ENST00000479051 OR10D4PQ8NGN7 298 aa13.21□□□□□ -0.29
VARS-224ENST00000479051 SYCNQ0VAF6 134 aa13.2□□□□□ -0.3
VARS-224ENST00000479051 ZC2HC1BQ5TFG8 222 aa13.2□□□□□ -0.3
VARS-224ENST00000479051 SDIM1Q6ZPB5 146 aa13.2□□□□□ -0.3
VARS-224ENST00000479051 LINC00526Q96FQ7 95 aa13.2□□□□□ -0.3
VARS-224ENST00000479051 CARD19Q96LW7 228 aa13.2□□□□□ -0.3
VARS-224ENST00000479051 CHAC1Q9BUX1 264 aa13.2□□□□□ -0.3
VARS-224ENST00000479051 SPAG11BQ08648 103 aa13.19□□□□□ -0.3
VARS-224ENST00000479051 ORAOV1Q8WV07 137 aa13.19□□□□□ -0.3
VARS-224ENST00000479051 IGLV4-69A0A075B6H9 119 aa13.18□□□□□ -0.3
VARS-224ENST00000479051 A0A087WZ39 114 aa13.18□□□□□ -0.3
VARS-224ENST00000479051 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.18□□□□□ -0.3
VARS-224ENST00000479051 HBDP02042 147 aa13.18□□□□□ -0.3
VARS-224ENST00000479051 SCXQ7RTU7 201 aa13.18□□□□□ -0.3
VARS-224ENST00000479051 CAMK2N2Q96S95 79 aa13.18□□□□□ -0.3
VARS-224ENST00000479051 TRGC2P03986 189 aa13.17□□□□□ -0.3
VARS-224ENST00000479051 HERVK_113P63121 156 aa13.17□□□□□ -0.3
VARS-224ENST00000479051 FAM19A3Q7Z5A8 133 aa13.17□□□□□ -0.3
VARS-224ENST00000479051 LINC01561Q8N1V8 128 aa13.17□□□□□ -0.3
VARS-224ENST00000479051 URB1-AS1Q96HZ7 61 aa13.17□□□□□ -0.3
VARS-224ENST00000479051 C2orf48Q96LS8 159 aa13.17□□□□□ -0.3
VARS-224ENST00000479051 GEMIN7Q9H840 131 aaKnown RBP13.17□□□□□ -0.3
VARS-224ENST00000479051 F8WDY8 70 aa13.16□□□□□ -0.3
VARS-224ENST00000479051 COX6A2Q02221 97 aa13.16□□□□□ -0.3
VARS-224ENST00000479051 CHCHD1Q96BP2 118 aaKnown RBP13.16□□□□□ -0.3
VARS-224ENST00000479051 EPM2AB3EWF7 344 aa13.15□□□□□ -0.3
VARS-224ENST00000479051 SMR3BP02814 79 aaPredicted RBP13.15□□□□□ -0.3
VARS-224ENST00000479051 PMVKQ15126 192 aa13.15□□□□□ -0.3
VARS-224ENST00000479051 COLCA2A8K830 154 aa13.14□□□□□ -0.31
VARS-224ENST00000479051 FAM229AH3BQW9 127 aa13.14□□□□□ -0.31
VARS-224ENST00000479051 BAGE3Q86Y29 109 aa13.14□□□□□ -0.31
VARS-224ENST00000479051 DPH3Q96FX2 82 aa13.14□□□□□ -0.31
VARS-224ENST00000479051 CST9LQ9H4G1 147 aa13.14□□□□□ -0.31
VARS-224ENST00000479051 DNAH8Q96JB1 4490 aa13.13□□□□□ -0.31
VARS-224ENST00000479051 A0A096LNJ9 63 aa13.13□□□□□ -0.31
VARS-224ENST00000479051 ATP5LO75964 103 aa13.13□□□□□ -0.31
VARS-224ENST00000479051 PMCHL1Q16048 86 aa13.13□□□□□ -0.31
VARS-224ENST00000479051 CIRBP-AS1Q8TBR5 109 aa13.13□□□□□ -0.31
VARS-224ENST00000479051 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.13□□□□□ -0.31
VARS-224ENST00000479051 A0A0J9YXV3 536 aa13.12□□□□□ -0.31
VARS-224ENST00000479051 Q6ZRU5 148 aa13.12□□□□□ -0.31
VARS-224ENST00000479051 PACRGQ96M98 296 aaPredicted RBP13.12□□□□□ -0.31
VARS-224ENST00000479051 TINCRA0A1B0GVN0 87 aa13.11□□□□□ -0.31
VARS-224ENST00000479051 NDUFA1O15239 70 aa13.11□□□□□ -0.31
VARS-224ENST00000479051 NDUFA6P56556 154 aa13.11□□□□□ -0.31
VARS-224ENST00000479051 Q5VSD8 79 aa13.11□□□□□ -0.31
VARS-224ENST00000479051 PRSS2P07478 247 aa13.1□□□□□ -0.31
VARS-224ENST00000479051 CIRBPQ14011 172 aaKnown RBP13.1□□□□□ -0.31
VARS-224ENST00000479051 PDZD11Q5EBL8 140 aa13.1□□□□□ -0.31
VARS-224ENST00000479051 LINC00469Q8N7U9 141 aa13.1□□□□□ -0.31
VARS-224ENST00000479051 LINC00474Q9P2X8 69 aa13.1□□□□□ -0.31
VARS-224ENST00000479051 IGKV2-24A0A0C4DH68 120 aa13.09□□□□□ -0.31
VARS-224ENST00000479051 HSBP1O75506 76 aa13.09□□□□□ -0.31
VARS-224ENST00000479051 SCO1O75880 301 aa13.09□□□□□ -0.31
VARS-224ENST00000479051 CHTF8P0CG12 524 aa13.09□□□□□ -0.31
VARS-224ENST00000479051 RNF151Q2KHN1 245 aa13.09□□□□□ -0.31
VARS-224ENST00000479051 SPACA4Q8TDM5 124 aa13.09□□□□□ -0.31
VARS-224ENST00000479051 CDKN2A-AS1Q9UH64 79 aa13.09□□□□□ -0.31
VARS-224ENST00000479051 LOC107984640A0A0U1RRK4 108 aa13.08□□□□□ -0.32
VARS-224ENST00000479051 LINC00528Q8N1L1 170 aa13.08□□□□□ -0.32
VARS-224ENST00000479051 KRTAP17-1Q9BYP8 105 aa13.08□□□□□ -0.32
VARS-224ENST00000479051 MRPL35Q9NZE8 188 aaKnown RBP13.08□□□□□ -0.32
VARS-224ENST00000479051 PANO1I0J062 215 aa13.07□□□□□ -0.32
VARS-224ENST00000479051 MAJINQ3KP22 176 aa13.07□□□□□ -0.32
VARS-224ENST00000479051 KRTAP4-5Q9BYR2 181 aa13.06□□□□□ -0.32
VARS-224ENST00000479051 TOMM7Q9P0U1 55 aa13.06□□□□□ -0.32
VARS-224ENST00000479051 IGLV5-45A0A087WSX0 123 aa13.05□□□□□ -0.32
VARS-224ENST00000479051 A0A096LNI7 61 aa13.05□□□□□ -0.32
VARS-224ENST00000479051 H3BRM9 83 aa13.05□□□□□ -0.32
VARS-224ENST00000479051 PLA2G1BP04054 148 aaKnown RBP13.05□□□□□ -0.32
VARS-224ENST00000479051 KIAA0087Q14695 138 aa13.05□□□□□ -0.32
VARS-224ENST00000479051 A0A087WYN8 130 aa13.04□□□□□ -0.32
VARS-224ENST00000479051 CKS1BP61024 79 aa13.04□□□□□ -0.32
VARS-224ENST00000479051 C6orf226Q5I0X4 101 aa13.04□□□□□ -0.32
VARS-224ENST00000479051 Q8IZM0 81 aa13.04□□□□□ -0.32
VARS-224ENST00000479051 IGLC3P0DOY3 106 aa13.03□□□□□ -0.32
VARS-224ENST00000479051 RPL18AQ02543 176 aaKnown RBP13.03□□□□□ -0.32
VARS-224ENST00000479051 GAGE2BQ13066 116 aa13.03□□□□□ -0.32
VARS-224ENST00000479051 UNQ6190/PRO20217Q6UXQ8 127 aa13.03□□□□□ -0.32
VARS-224ENST00000479051 IFI27L1Q96BM0 104 aa13.03□□□□□ -0.32
VARS-224ENST00000479051 SERF1AO75920 110 aa13.02□□□□□ -0.33
VARS-224ENST00000479051 PTTG1IPP53801 180 aa13.02□□□□□ -0.33
VARS-224ENST00000479051 TRBV30A0A0K0K1B3 111 aa13.01□□□□□ -0.33
VARS-224ENST00000479051 C10orf25Q5T742 122 aa13.01□□□□□ -0.33
VARS-224ENST00000479051 FAM19A2Q8N3H0 131 aa13.01□□□□□ -0.33
VARS-224ENST00000479051 STPG4Q8N801 248 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms