RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 TRAV8-3A0A0A6YYJ7 113 aa9.62□□□□□ -0.87
USP11-207ENST00000478596 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.62□□□□□ -0.87
USP11-207ENST00000478596 PSCAO43653 123 aa9.62□□□□□ -0.87
USP11-207ENST00000478596 TEX43Q6ZNM6 134 aa9.62□□□□□ -0.87
USP11-207ENST00000478596 ZNF664Q8N3J9 261 aa9.62□□□□□ -0.87
USP11-207ENST00000478596 TMA7Q9Y2S6 64 aaKnown RBP9.62□□□□□ -0.87
USP11-207ENST00000478596 IGKV2D-24A0A075B6R9 120 aa9.61□□□□□ -0.87
USP11-207ENST00000478596 ATP5LO75964 103 aa9.61□□□□□ -0.87
USP11-207ENST00000478596 PDZD11Q5EBL8 140 aa9.61□□□□□ -0.87
USP11-207ENST00000478596 ERASQ7Z444 233 aa9.61□□□□□ -0.87
USP11-207ENST00000478596 NTN5Q8WTR8 489 aaPredicted RBP9.61□□□□□ -0.87
USP11-207ENST00000478596 TIMM17AQ99595 171 aa9.61□□□□□ -0.87
USP11-207ENST00000478596 C1orf43Q9BWL3 253 aa9.61□□□□□ -0.87
USP11-207ENST00000478596 KRTAP9-2Q9BYQ4 174 aa9.61□□□□□ -0.87
USP11-207ENST00000478596 CSDC2Q9Y534 153 aaKnown RBP9.61□□□□□ -0.87
USP11-207ENST00000478596 IGLV10-54A0A075B6I4 117 aa9.6□□□□□ -0.87
USP11-207ENST00000478596 IGLV4-3A0A075B6K6 122 aa9.6□□□□□ -0.87
USP11-207ENST00000478596 TRAV13-1A0A0B4J241 112 aa9.6□□□□□ -0.87
USP11-207ENST00000478596 IBA57-AS1B1ANH7 110 aa9.6□□□□□ -0.87
USP11-207ENST00000478596 KRTAP10-4P60372 401 aaPredicted RBP9.6□□□□□ -0.87
USP11-207ENST00000478596 MIAQ16674 131 aa9.6□□□□□ -0.87
USP11-207ENST00000478596 OPRPNQ99935 248 aaPredicted RBP9.6□□□□□ -0.87
USP11-207ENST00000478596 VCX2Q9H322 139 aa9.6□□□□□ -0.87
USP11-207ENST00000478596 CDC42SE2Q9NRR3 84 aa9.6□□□□□ -0.87
USP11-207ENST00000478596 PYGO1Q9Y3Y4 419 aa9.6□□□□□ -0.87
USP11-207ENST00000478596 H0Y8G0 127 aa9.59□□□□□ -0.87
USP11-207ENST00000478596 LEPROTL1O95214 131 aa9.59□□□□□ -0.87
USP11-207ENST00000478596 FABP4P15090 132 aa9.59□□□□□ -0.87
USP11-207ENST00000478596 S100A2P29034 98 aa9.59□□□□□ -0.87
USP11-207ENST00000478596 LINC00310P59036 64 aa9.59□□□□□ -0.87
USP11-207ENST00000478596 MRPS36P82909 103 aaKnown RBP9.59□□□□□ -0.87
USP11-207ENST00000478596 SS18Q15532 418 aa9.59□□□□□ -0.87
USP11-207ENST00000478596 HSPB8Q9UJY1 196 aa9.59□□□□□ -0.87
USP11-207ENST00000478596 A0A096LNJ9 63 aa9.58□□□□□ -0.88
USP11-207ENST00000478596 NPSP0C0P6 89 aa9.58□□□□□ -0.88
USP11-207ENST00000478596 TM2D2Q9BX73 214 aa9.58□□□□□ -0.88
USP11-207ENST00000478596 IGIPA6NJ69 53 aa9.57□□□□□ -0.88
USP11-207ENST00000478596 NUPR1O60356 82 aa9.57□□□□□ -0.88
USP11-207ENST00000478596 ENHOQ6UWT2 76 aa9.57□□□□□ -0.88
USP11-207ENST00000478596 Q6ZSA8 131 aa9.57□□□□□ -0.88
USP11-207ENST00000478596 IFI27L1Q96BM0 104 aa9.57□□□□□ -0.88
USP11-207ENST00000478596 TRAV8-4A0A0B4J246 113 aa9.56□□□□□ -0.88
USP11-207ENST00000478596 PRSS1P07477 247 aa9.56□□□□□ -0.88
USP11-207ENST00000478596 XCL1P47992 114 aa9.56□□□□□ -0.88
USP11-207ENST00000478596 PRR34Q9NV39 138 aa9.56□□□□□ -0.88
USP11-207ENST00000478596 COX11Q9Y6N1 276 aa9.56□□□□□ -0.88
USP11-207ENST00000478596 LINC00959A0A1B0GUT2 108 aa9.55□□□□□ -0.88
USP11-207ENST00000478596 CCL25O15444 150 aa9.55□□□□□ -0.88
USP11-207ENST00000478596 COA6Q5JTJ3 125 aaKnown RBP9.55□□□□□ -0.88
USP11-207ENST00000478596 ZC2HC1BQ5TFG8 222 aa9.55□□□□□ -0.88
USP11-207ENST00000478596 BAALCQ8WXS3 180 aa9.55□□□□□ -0.88
USP11-207ENST00000478596 CHCHD10Q8WYQ3 142 aaPredicted RBP9.55□□□□□ -0.88
USP11-207ENST00000478596 KRTAP9-6A0A140TA67 174 aa9.54□□□□□ -0.88
USP11-207ENST00000478596 PMVKQ15126 192 aa9.54□□□□□ -0.88
USP11-207ENST00000478596 GAGE12HA6NDE8 117 aa9.53□□□□□ -0.88
USP11-207ENST00000478596 LINC00173Q6ZV60 143 aa9.53□□□□□ -0.88
USP11-207ENST00000478596 MAP1LC3CQ9BXW4 147 aa9.53□□□□□ -0.88
USP11-207ENST00000478596 GEMIN7Q9H840 131 aaKnown RBP9.53□□□□□ -0.88
USP11-207ENST00000478596 TNXBP22105 4242 aa9.53□□□□□ -0.88
USP11-207ENST00000478596 LRCOL1A6NCL2 159 aa9.52□□□□□ -0.89
USP11-207ENST00000478596 SEC11AP67812 179 aa9.52□□□□□ -0.89
USP11-207ENST00000478596 AMELXQ99217 191 aa9.52□□□□□ -0.89
USP11-207ENST00000478596 MALP21145 153 aa9.51□□□□□ -0.89
USP11-207ENST00000478596 KRTDAPP60985 99 aa9.51□□□□□ -0.89
USP11-207ENST00000478596 SNRPEP62304 92 aaKnown RBP9.51□□□□□ -0.89
USP11-207ENST00000478596 PACRGQ96M98 296 aaPredicted RBP9.51□□□□□ -0.89
USP11-207ENST00000478596 CST9LQ9H4G1 147 aa9.51□□□□□ -0.89
USP11-207ENST00000478596 MT1HL1P0DM35 61 aa9.5□□□□□ -0.89
USP11-207ENST00000478596 UBE2D1P51668 147 aa9.5□□□□□ -0.89
USP11-207ENST00000478596 HIST3H2BBQ8N257 126 aa9.5□□□□□ -0.89
USP11-207ENST00000478596 CHAC1Q9BUX1 264 aa9.5□□□□□ -0.89
USP11-207ENST00000478596 CHTOPQ9Y3Y2 248 aaKnown RBP9.5□□□□□ -0.89
USP11-207ENST00000478596 A0A0J9YXV3 536 aa9.49□□□□□ -0.89
USP11-207ENST00000478596 COX7A2LO14548 114 aa9.49□□□□□ -0.89
USP11-207ENST00000478596 LECT2O14960 151 aa9.49□□□□□ -0.89
USP11-207ENST00000478596 HERVK_113P63121 156 aa9.49□□□□□ -0.89
USP11-207ENST00000478596 CD164L2Q6UWJ8 174 aa9.49□□□□□ -0.89
USP11-207ENST00000478596 LINC00469Q8N7U9 141 aa9.49□□□□□ -0.89
USP11-207ENST00000478596 Q8N814 137 aa9.49□□□□□ -0.89
USP11-207ENST00000478596 FAM104AQ969W3 186 aa9.49□□□□□ -0.89
USP11-207ENST00000478596 C20orf202A1L168 122 aa9.48□□□□□ -0.89
USP11-207ENST00000478596 TRAV12-1A0A0B4J245 112 aa9.47□□□□□ -0.89
USP11-207ENST00000478596 LINC00242Q5T6M2 205 aa9.47□□□□□ -0.89
USP11-207ENST00000478596 C5orf38Q86SI9 138 aa9.47□□□□□ -0.89
USP11-207ENST00000478596 TINCRA0A1B0GVN0 87 aa9.46□□□□□ -0.9
USP11-207ENST00000478596 APOMO95445 188 aa9.46□□□□□ -0.9
USP11-207ENST00000478596 FOXI1Q12951 378 aa9.46□□□□□ -0.9
USP11-207ENST00000478596 SCXQ7RTU7 201 aa9.46□□□□□ -0.9
USP11-207ENST00000478596 HIST1H2BLQ99880 126 aa9.46□□□□□ -0.9
USP11-207ENST00000478596 C5orf52A6NGY3 159 aa9.45□□□□□ -0.9
USP11-207ENST00000478596 USP17L23D6RBM5 183 aa9.45□□□□□ -0.9
USP11-207ENST00000478596 F8VRH5 84 aa9.45□□□□□ -0.9
USP11-207ENST00000478596 H3BRM9 83 aa9.45□□□□□ -0.9
USP11-207ENST00000478596 SYS1-DBNDD2H3BUS1 97 aa9.45□□□□□ -0.9
USP11-207ENST00000478596 C14orf177Q52M58 125 aa9.45□□□□□ -0.9
USP11-207ENST00000478596 TMEM170BQ5T4T1 132 aa9.45□□□□□ -0.9
USP11-207ENST00000478596 CFAP161Q6P656 301 aa9.45□□□□□ -0.9
USP11-207ENST00000478596 PMCHL2Q9BQD1 86 aa9.45□□□□□ -0.9
USP11-207ENST00000478596 MRPL35Q9NZE8 188 aaKnown RBP9.45□□□□□ -0.9
USP11-207ENST00000478596 C3orf79P0CE67 100 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms