RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 COX7A2LO14548 114 aa17.44■□□□□ 0.38
CCM2-211ENST00000478582 HBDP02042 147 aa17.44■□□□□ 0.38
CCM2-211ENST00000478582 KRTAP10-1P60331 282 aa17.44■□□□□ 0.38
CCM2-211ENST00000478582 IGHV3OR16-9A0A0B4J2B5 98 aa17.43■□□□□ 0.38
CCM2-211ENST00000478582 IGHV1-58A0A0C4DH39 117 aa17.43■□□□□ 0.38
CCM2-211ENST00000478582 hDV102S1A0JD36 115 aa17.43■□□□□ 0.38
CCM2-211ENST00000478582 LINC00242Q5T6M2 205 aa17.43■□□□□ 0.38
CCM2-211ENST00000478582 ZC2HC1BQ5TFG8 222 aa17.43■□□□□ 0.38
CCM2-211ENST00000478582 FAM19A3Q7Z5A8 133 aa17.43■□□□□ 0.38
CCM2-211ENST00000478582 Q8N1X5 172 aa17.43■□□□□ 0.38
CCM2-211ENST00000478582 GVQW2A0A096LPI5 108 aaPredicted RBP17.42■□□□□ 0.38
CCM2-211ENST00000478582 BAGE3Q86Y29 109 aa17.42■□□□□ 0.38
CCM2-211ENST00000478582 PDZD11Q5EBL8 140 aa17.41■□□□□ 0.38
CCM2-211ENST00000478582 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.4■□□□□ 0.38
CCM2-211ENST00000478582 CNBPP62633 177 aaKnown RBP17.4■□□□□ 0.38
CCM2-211ENST00000478582 PMCHL1Q16048 86 aa17.4■□□□□ 0.38
CCM2-211ENST00000478582 C5orf38Q86SI9 138 aa17.4■□□□□ 0.38
CCM2-211ENST00000478582 MALP21145 153 aa17.39■□□□□ 0.37
CCM2-211ENST00000478582 XGP55808 180 aa17.38■□□□□ 0.37
CCM2-211ENST00000478582 SLPIP03973 132 aa17.37■□□□□ 0.37
CCM2-211ENST00000478582 COX6A2Q02221 97 aa17.37■□□□□ 0.37
CCM2-211ENST00000478582 HIGD2BQ4VC39 106 aa17.37■□□□□ 0.37
CCM2-211ENST00000478582 APOMO95445 188 aa17.36■□□□□ 0.37
CCM2-211ENST00000478582 SEC11AP67812 179 aa17.36■□□□□ 0.37
CCM2-211ENST00000478582 C9orf163Q8N9P6 203 aa17.36■□□□□ 0.37
CCM2-211ENST00000478582 CST9LQ9H4G1 147 aa17.36■□□□□ 0.37
CCM2-211ENST00000478582 A0A087WZ39 114 aa17.35■□□□□ 0.37
CCM2-211ENST00000478582 HSBP1O75506 76 aa17.35■□□□□ 0.37
CCM2-211ENST00000478582 ATP5LO75964 103 aa17.35■□□□□ 0.37
CCM2-211ENST00000478582 PMVKQ15126 192 aa17.35■□□□□ 0.37
CCM2-211ENST00000478582 LINC00310P59036 64 aa17.34■□□□□ 0.37
CCM2-211ENST00000478582 LINC01561Q8N1V8 128 aa17.34■□□□□ 0.37
CCM2-211ENST00000478582 SERF1AO75920 110 aa17.33■□□□□ 0.36
CCM2-211ENST00000478582 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.32■□□□□ 0.36
CCM2-211ENST00000478582 HERVK_113P63121 156 aa17.32■□□□□ 0.36
CCM2-211ENST00000478582 LINC01620Q4KN68 170 aa17.32■□□□□ 0.36
CCM2-211ENST00000478582 IGHV3-64A0A075B6Q5 118 aa17.31■□□□□ 0.36
CCM2-211ENST00000478582 ZNF561-AS1K7EIQ3 104 aa17.31■□□□□ 0.36
CCM2-211ENST00000478582 HIST1H2BKO60814 126 aa17.31■□□□□ 0.36
CCM2-211ENST00000478582 HIST1H2BJP06899 126 aa17.31■□□□□ 0.36
CCM2-211ENST00000478582 HIST1H2BOP23527 126 aa17.31■□□□□ 0.36
CCM2-211ENST00000478582 HIST1H2BBP33778 126 aa17.31■□□□□ 0.36
CCM2-211ENST00000478582 HIST1H2BDP58876 126 aa17.31■□□□□ 0.36
CCM2-211ENST00000478582 HIST1H2BCP62807 126 aa17.31■□□□□ 0.36
CCM2-211ENST00000478582 HIST2H2BEQ16778 126 aa17.31■□□□□ 0.36
CCM2-211ENST00000478582 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.31■□□□□ 0.36
CCM2-211ENST00000478582 OR10D4PQ8NGN7 298 aa17.31■□□□□ 0.36
CCM2-211ENST00000478582 HIST1H2BHQ93079 126 aa17.31■□□□□ 0.36
CCM2-211ENST00000478582 HIST1H2BNQ99877 126 aa17.31■□□□□ 0.36
CCM2-211ENST00000478582 HIST1H2BMQ99879 126 aa17.31■□□□□ 0.36
CCM2-211ENST00000478582 ABCA13Q86UQ4 5058 aa17.31■□□□□ 0.36
CCM2-211ENST00000478582 A0A0J9YXV3 536 aa17.3■□□□□ 0.36
CCM2-211ENST00000478582 TINCRA0A1B0GVN0 87 aa17.29■□□□□ 0.36
CCM2-211ENST00000478582 FAM19A2Q8N3H0 131 aa17.29■□□□□ 0.36
CCM2-211ENST00000478582 GEMIN7Q9H840 131 aaKnown RBP17.28■□□□□ 0.36
CCM2-211ENST00000478582 IGLV4-69A0A075B6H9 119 aa17.27■□□□□ 0.36
CCM2-211ENST00000478582 NUPR1O60356 82 aa17.27■□□□□ 0.36
CCM2-211ENST00000478582 Q6ZSA8 131 aa17.27■□□□□ 0.36
CCM2-211ENST00000478582 LINC00526Q96FQ7 95 aa17.27■□□□□ 0.36
CCM2-211ENST00000478582 C2orf48Q96LS8 159 aa17.27■□□□□ 0.36
CCM2-211ENST00000478582 ORAOV1Q8WV07 137 aa17.26■□□□□ 0.35
CCM2-211ENST00000478582 CDKN2A-AS1Q9UH64 79 aa17.26■□□□□ 0.35
CCM2-211ENST00000478582 IGLV5-45A0A087WSX0 123 aa17.25■□□□□ 0.35
CCM2-211ENST00000478582 SPAG11BQ08648 103 aa17.25■□□□□ 0.35
CCM2-211ENST00000478582 SDIM1Q6ZPB5 146 aa17.25■□□□□ 0.35
CCM2-211ENST00000478582 IFI27L1Q96BM0 104 aa17.25■□□□□ 0.35
CCM2-211ENST00000478582 FAM30AQ9NZY2 134 aa17.25■□□□□ 0.35
CCM2-211ENST00000478582 EPM2AB3EWF7 344 aa17.24■□□□□ 0.35
CCM2-211ENST00000478582 F8WDY8 70 aa17.24■□□□□ 0.35
CCM2-211ENST00000478582 NDUFA6P56556 154 aa17.24■□□□□ 0.35
CCM2-211ENST00000478582 SYCNQ0VAF6 134 aa17.23■□□□□ 0.35
CCM2-211ENST00000478582 IGLC3P0DOY3 106 aa17.22■□□□□ 0.35
CCM2-211ENST00000478582 CARD19Q96LW7 228 aa17.22■□□□□ 0.35
CCM2-211ENST00000478582 KIAA0087Q14695 138 aa17.21■□□□□ 0.35
CCM2-211ENST00000478582 LINC00469Q8N7U9 141 aa17.21■□□□□ 0.35
CCM2-211ENST00000478582 TRAV12-1A0A0B4J245 112 aa17.2■□□□□ 0.34
CCM2-211ENST00000478582 LEPROTL1O95214 131 aa17.2■□□□□ 0.34
CCM2-211ENST00000478582 CAMK2N2Q96S95 79 aa17.2■□□□□ 0.34
CCM2-211ENST00000478582 Q6ZRU5 148 aa17.18■□□□□ 0.34
CCM2-211ENST00000478582 SMR3BP02814 79 aaPredicted RBP17.17■□□□□ 0.34
CCM2-211ENST00000478582 HAMPP81172 84 aa17.17■□□□□ 0.34
CCM2-211ENST00000478582 COA6Q5JTJ3 125 aaKnown RBP17.17■□□□□ 0.34
CCM2-211ENST00000478582 PACRGQ96M98 296 aaPredicted RBP17.17■□□□□ 0.34
CCM2-211ENST00000478582 CHAC1Q9BUX1 264 aa17.17■□□□□ 0.34
CCM2-211ENST00000478582 HSPB8Q9UJY1 196 aa17.16■□□□□ 0.34
CCM2-211ENST00000478582 CHTOPQ9Y3Y2 248 aaKnown RBP17.16■□□□□ 0.34
CCM2-211ENST00000478582 RNF151Q2KHN1 245 aa17.15■□□□□ 0.34
CCM2-211ENST00000478582 Q5VSD8 79 aa17.15■□□□□ 0.34
CCM2-211ENST00000478582 Q8IZM0 81 aa17.15■□□□□ 0.34
CCM2-211ENST00000478582 MRPL35Q9NZE8 188 aaKnown RBP17.15■□□□□ 0.34
CCM2-211ENST00000478582 PKIGQ9Y2B9 76 aa17.15■□□□□ 0.34
CCM2-211ENST00000478582 DNAH8Q96JB1 4490 aa17.14■□□□□ 0.33
CCM2-211ENST00000478582 SMIM1B2RUZ4 78 aa17.14■□□□□ 0.33
CCM2-211ENST00000478582 NDUFA1O15239 70 aa17.14■□□□□ 0.33
CCM2-211ENST00000478582 H3BRM9 83 aa17.13■□□□□ 0.33
CCM2-211ENST00000478582 CIRBPQ14011 172 aaKnown RBP17.13■□□□□ 0.33
CCM2-211ENST00000478582 FAT1Q14517 4588 aa17.13■□□□□ 0.33
CCM2-211ENST00000478582 ZNF22P17026 224 aaPredicted RBP17.12■□□□□ 0.33
CCM2-211ENST00000478582 C11orf86A6NJI1 115 aa17.11■□□□□ 0.33
CCM2-211ENST00000478582 F8VRH5 84 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 1491.8 ms