RNA–Protein interactions for RNA: ENST00000477984.1

LINC00336-201, long intergenic non-protein coding RNA 336, humanhuman

TSL 2 BASIC

Gene LINC00336, Length 2,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336-201ENST00000477984 CIRBPQ14011 172 aaKnown RBP12.29□□□□□ -0.44
LINC00336-201ENST00000477984 RNASE13Q5GAN3 156 aaKnown RBP12.29□□□□□ -0.44
LINC00336-201ENST00000477984 HERVK_113P63121 156 aa12.29□□□□□ -0.44
LINC00336-201ENST00000477984 DAZ2Q13117 558 aaKnown RBP12.29□□□□□ -0.44
LINC00336-201ENST00000477984 TMEM101Q96IK0 257 aa12.29□□□□□ -0.44
LINC00336-201ENST00000477984 CDKN2A-AS1Q9UH64 79 aa12.29□□□□□ -0.44
LINC00336-201ENST00000477984 RPL35AP18077 110 aaKnown RBP12.28□□□□□ -0.44
LINC00336-201ENST00000477984 CSDC2Q9Y534 153 aaKnown RBP12.28□□□□□ -0.44
LINC00336-201ENST00000477984 TRAV4A0A0B4J268 109 aa12.28□□□□□ -0.44
LINC00336-201ENST00000477984 NHLRC4P0CG21 123 aaPredicted RBP12.28□□□□□ -0.44
LINC00336-201ENST00000477984 GAGE5Q13069 117 aa12.28□□□□□ -0.44
LINC00336-201ENST00000477984 GAGE6Q13070 117 aa12.28□□□□□ -0.44
LINC00336-201ENST00000477984 C16orf74Q96GX8 76 aa12.28□□□□□ -0.44
LINC00336-201ENST00000477984 CSNK1G2-AS1Q8NCQ2 148 aa12.27□□□□□ -0.45
LINC00336-201ENST00000477984 HIVEP2P31629 2446 aa12.27□□□□□ -0.45
LINC00336-201ENST00000477984 A8MZ25 164 aa12.26□□□□□ -0.45
LINC00336-201ENST00000477984 NDUFV3P56181 108 aaKnown RBP12.26□□□□□ -0.45
LINC00336-201ENST00000477984 Q6ZTI0 123 aa12.26□□□□□ -0.45
LINC00336-201ENST00000477984 MTORP42345 2549 aa12.26□□□□□ -0.45
LINC00336-201ENST00000477984 PLAC8L1A1L4L8 177 aa12.26□□□□□ -0.45
LINC00336-201ENST00000477984 TRBV10-1A0A0K0K1A3 114 aa12.25□□□□□ -0.45
LINC00336-201ENST00000477984 CRLF1O75462 422 aa12.25□□□□□ -0.45
LINC00336-201ENST00000477984 C15orf53Q8NAA6 179 aa12.25□□□□□ -0.45
LINC00336-201ENST00000477984 LINC00308Q8TCZ7 52 aa12.25□□□□□ -0.45
LINC00336-201ENST00000477984 NOP10Q9NPE3 64 aaKnown RBP12.25□□□□□ -0.45
LINC00336-201ENST00000477984 CLEC2BQ92478 149 aa12.24□□□□□ -0.45
LINC00336-201ENST00000477984 IGHV3-38A0A0C4DH36 116 aa12.23□□□□□ -0.45
LINC00336-201ENST00000477984 K7EQD1 137 aa12.23□□□□□ -0.45
LINC00336-201ENST00000477984 LINC00242Q5T6M2 205 aa12.23□□□□□ -0.45
LINC00336-201ENST00000477984 DGAT2L7PQ6IED9 249 aa12.23□□□□□ -0.45
LINC00336-201ENST00000477984 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.23□□□□□ -0.45
LINC00336-201ENST00000477984 OVOL2Q9BRP0 275 aa12.23□□□□□ -0.45
LINC00336-201ENST00000477984 WNK1Q9H4A3 2382 aa12.23□□□□□ -0.45
LINC00336-201ENST00000477984 TTC32Q5I0X7 151 aa12.23□□□□□ -0.45
LINC00336-201ENST00000477984 COX7A2LO14548 114 aa12.22□□□□□ -0.45
LINC00336-201ENST00000477984 SHISA2Q6UWI4 295 aa12.22□□□□□ -0.45
LINC00336-201ENST00000477984 ACYP1P07311 99 aa12.22□□□□□ -0.45
LINC00336-201ENST00000477984 RPL36AP83881 106 aaKnown RBP12.22□□□□□ -0.45
LINC00336-201ENST00000477984 RPL36ALQ969Q0 106 aaKnown RBP12.22□□□□□ -0.45
LINC00336-201ENST00000477984 COX6A2Q02221 97 aa12.21□□□□□ -0.45
LINC00336-201ENST00000477984 Q9H8V8 135 aa12.21□□□□□ -0.45
LINC00336-201ENST00000477984 NIPBLQ6KC79 2804 aaeCLIP12.2□□□□□ -0.46
LINC00336-201ENST00000477984 SMIM1B2RUZ4 78 aa12.2□□□□□ -0.46
LINC00336-201ENST00000477984 NPC2P61916 151 aa12.2□□□□□ -0.46
LINC00336-201ENST00000477984 HERV-K104P63124 156 aa12.2□□□□□ -0.46
LINC00336-201ENST00000477984 DAZ4Q86SG3 579 aaKnown RBP12.2□□□□□ -0.46
LINC00336-201ENST00000477984 ZNF625Q96I27 306 aaPredicted RBP12.2□□□□□ -0.46
LINC00336-201ENST00000477984 DAZ3Q9NR90 486 aaKnown RBP12.2□□□□□ -0.46
LINC00336-201ENST00000477984 TRBV7-7A0A0K0K1E9 115 aa12.19□□□□□ -0.46
LINC00336-201ENST00000477984 C9orf66Q5T8R8 295 aa12.19□□□□□ -0.46
LINC00336-201ENST00000477984 GAGE12JA6NER3 117 aa12.18□□□□□ -0.46
LINC00336-201ENST00000477984 GAGE7O76087 117 aa12.18□□□□□ -0.46
LINC00336-201ENST00000477984 TRACP01848 142 aa12.18□□□□□ -0.46
LINC00336-201ENST00000477984 GAGE12FP0CL80 117 aa12.18□□□□□ -0.46
LINC00336-201ENST00000477984 GAGE12GP0CL81 117 aa12.18□□□□□ -0.46
LINC00336-201ENST00000477984 GAGE12IP0CL82 117 aa12.18□□□□□ -0.46
LINC00336-201ENST00000477984 GAGE4Q13068 117 aa12.18□□□□□ -0.46
LINC00336-201ENST00000477984 NSD1Q96L73 2696 aaPredicted RBP12.17□□□□□ -0.46
LINC00336-201ENST00000477984 TRGV2A0A075B6R0 118 aa12.17□□□□□ -0.46
LINC00336-201ENST00000477984 DAND5Q8N907 189 aa12.17□□□□□ -0.46
LINC00336-201ENST00000477984 F5H768 121 aa12.17□□□□□ -0.46
LINC00336-201ENST00000477984 FN1P02751 2386 aaKnown RBP12.17□□□□□ -0.46
LINC00336-201ENST00000477984 IMUPQ9GZP8 106 aa12.16□□□□□ -0.46
LINC00336-201ENST00000477984 TRBV6-4A0A1B0GX49 114 aa12.16□□□□□ -0.46
LINC00336-201ENST00000477984 CDC42SE2Q9NRR3 84 aa12.16□□□□□ -0.46
LINC00336-201ENST00000477984 LINC00694P0DN24 101 aa12.15□□□□□ -0.46
LINC00336-201ENST00000477984 SOSTDC1Q6X4U4 206 aa12.15□□□□□ -0.46
LINC00336-201ENST00000477984 NTM-AS1Q6ZSK4 140 aa12.14□□□□□ -0.47
LINC00336-201ENST00000477984 FAM222AQ5U5X8 452 aa12.14□□□□□ -0.47
LINC00336-201ENST00000477984 SPATA3Q8NHX4 192 aa12.14□□□□□ -0.47
LINC00336-201ENST00000477984 SDIM1Q6ZPB5 146 aa12.13□□□□□ -0.47
LINC00336-201ENST00000477984 PRIMA1Q86XR5 153 aa12.13□□□□□ -0.47
LINC00336-201ENST00000477984 SETD2Q9BYW2 2564 aaPredicted RBP12.12□□□□□ -0.47
LINC00336-201ENST00000477984 TRGV4A0A0C4DH28 118 aa12.11□□□□□ -0.47
LINC00336-201ENST00000477984 B5MCH6 92 aa12.11□□□□□ -0.47
LINC00336-201ENST00000477984 KIR2DL5BQ8NHK3 375 aa12.11□□□□□ -0.47
LINC00336-201ENST00000477984 FHL2Q14192 279 aa12.11□□□□□ -0.47
LINC00336-201ENST00000477984 MEIG1Q5JSS6 88 aa12.11□□□□□ -0.47
LINC00336-201ENST00000477984 LINC00612Q8N6U2 182 aa12.11□□□□□ -0.47
LINC00336-201ENST00000477984 SMIM9A6NGZ8 99 aa12.1□□□□□ -0.47
LINC00336-201ENST00000477984 TRAV13-2A0A0B4J235 113 aa12.09□□□□□ -0.47
LINC00336-201ENST00000477984 CCDC179H3BU77 68 aa12.09□□□□□ -0.47
LINC00336-201ENST00000477984 RPL28P46779 137 aaKnown RBP12.09□□□□□ -0.47
LINC00336-201ENST00000477984 CFAP161Q6P656 301 aa12.09□□□□□ -0.47
LINC00336-201ENST00000477984 X6R8D5 127 aa12.09□□□□□ -0.47
LINC00336-201ENST00000477984 TRAV13-1A0A0B4J241 112 aa12.08□□□□□ -0.47
LINC00336-201ENST00000477984 LOC100131303A0A0U1RQF7 123 aa12.08□□□□□ -0.47
LINC00336-201ENST00000477984 TMEM243Q9BU79 118 aa12.08□□□□□ -0.47
LINC00336-201ENST00000477984 SS18L2Q9UHA2 77 aa12.08□□□□□ -0.47
LINC00336-201ENST00000477984 LINC00643Q86TS7 51 aa12.07□□□□□ -0.48
LINC00336-201ENST00000477984 JMJD1CQ15652 2540 aa12.06□□□□□ -0.48
LINC00336-201ENST00000477984 UBE2L6O14933 153 aa12.05□□□□□ -0.48
LINC00336-201ENST00000477984 BAALC-AS2P0C853 105 aa12.05□□□□□ -0.48
LINC00336-201ENST00000477984 INAFM2P0DMQ5 153 aa12.05□□□□□ -0.48
LINC00336-201ENST00000477984 C22orf24Q9Y442 160 aa12.05□□□□□ -0.48
LINC00336-201ENST00000477984 WFDC9Q8NEX5 89 aa12.05□□□□□ -0.48
LINC00336-201ENST00000477984 A0A0U1RRA0 63 aa12.04□□□□□ -0.48
LINC00336-201ENST00000477984 DEFB130BP0DP73 79 aa12.04□□□□□ -0.48
LINC00336-201ENST00000477984 DEFB130AP0DP74 79 aa12.04□□□□□ -0.48
LINC00336-201ENST00000477984 APOC4P55056 127 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms