RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.75
SPTLC1-205ENST00000477888 IGLV5-37A0A075B6J1 123 aa4.09□□□□□ -1.75
SPTLC1-205ENST00000477888 CCDC160A6NGH7 325 aa4.09□□□□□ -1.75
SPTLC1-205ENST00000477888 NDUFA1O15239 70 aa4.09□□□□□ -1.75
SPTLC1-205ENST00000477888 BCE1O60756 84 aa4.09□□□□□ -1.75
SPTLC1-205ENST00000477888 TRGC1P0CF51 173 aa4.09□□□□□ -1.75
SPTLC1-205ENST00000477888 AKR1C3P42330 323 aa4.09□□□□□ -1.75
SPTLC1-205ENST00000477888 BAGE2Q86Y30 109 aa4.09□□□□□ -1.75
SPTLC1-205ENST00000477888 RPL39LQ96EH5 51 aaKnown RBP4.09□□□□□ -1.75
SPTLC1-205ENST00000477888 ALG5Q9Y673 324 aa4.09□□□□□ -1.75
SPTLC1-205ENST00000477888 LOC100996750A0A140TA64 210 aa4.08□□□□□ -1.76
SPTLC1-205ENST00000477888 CTXND1A0A1B0GTU2 59 aa4.08□□□□□ -1.76
SPTLC1-205ENST00000477888 SDHAF1A6NFY7 115 aa4.08□□□□□ -1.76
SPTLC1-205ENST00000477888 F2Z2F3 143 aa4.08□□□□□ -1.76
SPTLC1-205ENST00000477888 I3L3M4 83 aa4.08□□□□□ -1.76
SPTLC1-205ENST00000477888 S100A9P06702 114 aaKnown RBP4.08□□□□□ -1.76
SPTLC1-205ENST00000477888 PRSS2P07478 247 aa4.08□□□□□ -1.76
SPTLC1-205ENST00000477888 PET100P0DJ07 73 aa4.08□□□□□ -1.76
SPTLC1-205ENST00000477888 CTRLP40313 264 aa4.08□□□□□ -1.76
SPTLC1-205ENST00000477888 RPL24P83731 157 aaKnown RBP4.08□□□□□ -1.76
SPTLC1-205ENST00000477888 XP32Q5T750 250 aa4.08□□□□□ -1.76
SPTLC1-205ENST00000477888 KRTAP4-6Q9BYQ5 205 aa4.08□□□□□ -1.76
SPTLC1-205ENST00000477888 C22orf24Q9Y442 160 aa4.08□□□□□ -1.76
SPTLC1-205ENST00000477888 IGKV2D-26A0A0A0MRZ7 120 aa4.07□□□□□ -1.76
SPTLC1-205ENST00000477888 TRAV13-1A0A0B4J241 112 aa4.07□□□□□ -1.76
SPTLC1-205ENST00000477888 LYZL1Q6UWQ5 148 aa4.07□□□□□ -1.76
SPTLC1-205ENST00000477888 KRTAP13-1Q8IUC0 172 aa4.07□□□□□ -1.76
SPTLC1-205ENST00000477888 STOML3Q8TAV4 291 aa4.07□□□□□ -1.76
SPTLC1-205ENST00000477888 ORAOV1Q8WV07 137 aa4.07□□□□□ -1.76
SPTLC1-205ENST00000477888 MRAP2Q96G30 205 aa4.07□□□□□ -1.76
SPTLC1-205ENST00000477888 CYTL1Q9NRR1 136 aa4.07□□□□□ -1.76
SPTLC1-205ENST00000477888 MACF1Q9UPN3 7388 aaKnown RBP4.07□□□□□ -1.76
SPTLC1-205ENST00000477888 NDUFC2-KCTD14E9PQ53 114 aa4.06□□□□□ -1.76
SPTLC1-205ENST00000477888 M0R2T5 61 aa4.06□□□□□ -1.76
SPTLC1-205ENST00000477888 PMCHP20382 165 aa4.06□□□□□ -1.76
SPTLC1-205ENST00000477888 SPAG11AQ6PDA7 123 aa4.06□□□□□ -1.76
SPTLC1-205ENST00000477888 C9orf62Q8N4C0 152 aa4.06□□□□□ -1.76
SPTLC1-205ENST00000477888 FAM210AQ96ND0 272 aa4.06□□□□□ -1.76
SPTLC1-205ENST00000477888 CCDC32Q9BV29 185 aa4.06□□□□□ -1.76
SPTLC1-205ENST00000477888 CSDC2Q9Y534 153 aaKnown RBP4.06□□□□□ -1.76
SPTLC1-205ENST00000477888 IGHV3OR16-9A0A0B4J2B5 98 aa4.05□□□□□ -1.76
SPTLC1-205ENST00000477888 TRBV6-5A0A0K0K1A5 114 aa4.05□□□□□ -1.76
SPTLC1-205ENST00000477888 A0A1B0GVG6 124 aa4.05□□□□□ -1.76
SPTLC1-205ENST00000477888 DEFA1P59665 94 aa4.05□□□□□ -1.76
SPTLC1-205ENST00000477888 RPS20P60866 119 aaKnown RBP4.05□□□□□ -1.76
SPTLC1-205ENST00000477888 KIAA0087Q14695 138 aa4.05□□□□□ -1.76
SPTLC1-205ENST00000477888 RNASE13Q5GAN3 156 aaKnown RBP4.05□□□□□ -1.76
SPTLC1-205ENST00000477888 LINC00518Q8N0U6 118 aa4.05□□□□□ -1.76
SPTLC1-205ENST00000477888 CNFNQ9BYD5 112 aa4.05□□□□□ -1.76
SPTLC1-205ENST00000477888 RNASE7Q9H1E1 156 aaKnown RBP4.05□□□□□ -1.76
SPTLC1-205ENST00000477888 CHTOPQ9Y3Y2 248 aaKnown RBP4.05□□□□□ -1.76
SPTLC1-205ENST00000477888 IGLV5-45A0A087WSX0 123 aa4.04□□□□□ -1.76
SPTLC1-205ENST00000477888 KRTAP4-16G5E9R7 235 aaPredicted RBP4.04□□□□□ -1.76
SPTLC1-205ENST00000477888 FOXA3P55318 350 aaPredicted RBP4.04□□□□□ -1.76
SPTLC1-205ENST00000477888 TWIST1Q15672 202 aa4.04□□□□□ -1.76
SPTLC1-205ENST00000477888 TEX261Q6UWH6 196 aa4.04□□□□□ -1.76
SPTLC1-205ENST00000477888 TMUB2Q71RG4 321 aa4.04□□□□□ -1.76
SPTLC1-205ENST00000477888 PACRGQ96M98 296 aaPredicted RBP4.04□□□□□ -1.76
SPTLC1-205ENST00000477888 TMEM242Q9NWH2 141 aa4.04□□□□□ -1.76
SPTLC1-205ENST00000477888 UBE2D4Q9Y2X8 147 aa4.04□□□□□ -1.76
SPTLC1-205ENST00000477888 IGLV9-49A0A0B4J1Y8 123 aa4.03□□□□□ -1.76
SPTLC1-205ENST00000477888 TRBV30A0A0K0K1B3 111 aa4.03□□□□□ -1.76
SPTLC1-205ENST00000477888 C7orf77A4D0Y5 90 aa4.03□□□□□ -1.76
SPTLC1-205ENST00000477888 MAP1LC3B2A6NCE7 125 aa4.03□□□□□ -1.76
SPTLC1-205ENST00000477888 UPK1BO75841 260 aa4.03□□□□□ -1.76
SPTLC1-205ENST00000477888 POLR2KP53803 58 aaKnown RBP4.03□□□□□ -1.76
SPTLC1-205ENST00000477888 C2orf82Q6UX34 121 aa4.03□□□□□ -1.76
SPTLC1-205ENST00000477888 MRPL55Q7Z7F7 128 aaKnown RBP4.03□□□□□ -1.76
SPTLC1-205ENST00000477888 C3orf22Q8N5N4 141 aa4.03□□□□□ -1.76
SPTLC1-205ENST00000477888 MAP1LC3BQ9GZQ8 125 aa4.03□□□□□ -1.76
SPTLC1-205ENST00000477888 TP73-AS1Q9UF72 201 aa4.03□□□□□ -1.76
SPTLC1-205ENST00000477888 FLGP20930 4061 aaPredicted RBP4.02□□□□□ -1.77
SPTLC1-205ENST00000477888 TRBV27A0A0K0K1C4 114 aa4.02□□□□□ -1.77
SPTLC1-205ENST00000477888 IFNA1P01562 189 aa4.02□□□□□ -1.77
SPTLC1-205ENST00000477888 KRTAP19-1Q8IUB9 90 aa4.02□□□□□ -1.77
SPTLC1-205ENST00000477888 DAND5Q8N907 189 aa4.02□□□□□ -1.77
SPTLC1-205ENST00000477888 FAM104AQ969W3 186 aa4.02□□□□□ -1.77
SPTLC1-205ENST00000477888 IGLV8-61A0A075B6I0 122 aa4.01□□□□□ -1.77
SPTLC1-205ENST00000477888 RPL37AP8A6NKH3 93 aa4.01□□□□□ -1.77
SPTLC1-205ENST00000477888 ZNF727A8MUV8 499 aa4.01□□□□□ -1.77
SPTLC1-205ENST00000477888 RPL35P42766 123 aaKnown RBP4.01□□□□□ -1.77
SPTLC1-205ENST00000477888 SEC61GP60059 68 aa4.01□□□□□ -1.77
SPTLC1-205ENST00000477888 RPL7L1Q6DKI1 246 aaKnown RBP4.01□□□□□ -1.77
SPTLC1-205ENST00000477888 Q6ZVQ6 151 aa4.01□□□□□ -1.77
SPTLC1-205ENST00000477888 LINC00167Q96N53 147 aa4.01□□□□□ -1.77
SPTLC1-205ENST00000477888 ST20Q9HBF5 79 aa4.01□□□□□ -1.77
SPTLC1-205ENST00000477888 XAGE1AQ9HD64 81 aa4.01□□□□□ -1.77
SPTLC1-205ENST00000477888 UBE2AP49459 152 aa4□□□□□ -1.77
SPTLC1-205ENST00000477888 PCOTHQ58A44 107 aa4□□□□□ -1.77
SPTLC1-205ENST00000477888 AKR1C8PQ5T2L2 129 aa4□□□□□ -1.77
SPTLC1-205ENST00000477888 Q6ZUT4 128 aa4□□□□□ -1.77
SPTLC1-205ENST00000477888 LINC00469Q8N7U9 141 aa4□□□□□ -1.77
SPTLC1-205ENST00000477888 KIR2DL4Q99706 377 aa4□□□□□ -1.77
SPTLC1-205ENST00000477888 MARVELD1Q9BSK0 173 aa4□□□□□ -1.77
SPTLC1-205ENST00000477888 SSNA1O43805 119 aa3.99□□□□□ -1.77
SPTLC1-205ENST00000477888 PLEKHB2Q96CS7 222 aa3.99□□□□□ -1.77
SPTLC1-205ENST00000477888 TIMM21Q9BVV7 248 aa3.99□□□□□ -1.77
SPTLC1-205ENST00000477888 SPINK1P00995 79 aa3.98□□□□□ -1.77
SPTLC1-205ENST00000477888 SMAGPQ0VAQ4 97 aa3.98□□□□□ -1.77
SPTLC1-205ENST00000477888 CENPWQ5EE01 88 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms