RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 EREGO14944 169 aa10.38□□□□□ -0.75
COPS3-207ENST00000477299 LINC01620Q4KN68 170 aa10.37□□□□□ -0.75
COPS3-207ENST00000477299 LINC00526Q96FQ7 95 aa10.37□□□□□ -0.75
COPS3-207ENST00000477299 A0A0J9YXV3 536 aa10.36□□□□□ -0.75
COPS3-207ENST00000477299 HSBP1O75506 76 aa10.36□□□□□ -0.75
COPS3-207ENST00000477299 SLPIP03973 132 aa10.36□□□□□ -0.75
COPS3-207ENST00000477299 HIGD2BQ4VC39 106 aa10.36□□□□□ -0.75
COPS3-207ENST00000477299 Q6ZN92 141 aa10.36□□□□□ -0.75
COPS3-207ENST00000477299 IGHV3OR16-9A0A0B4J2B5 98 aa10.35□□□□□ -0.75
COPS3-207ENST00000477299 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.35□□□□□ -0.75
COPS3-207ENST00000477299 NPSP0C0P6 89 aa10.35□□□□□ -0.75
COPS3-207ENST00000477299 CST9LQ9H4G1 147 aa10.35□□□□□ -0.75
COPS3-207ENST00000477299 NDUFA6P56556 154 aa10.34□□□□□ -0.75
COPS3-207ENST00000477299 C2orf88Q9BSF0 95 aa10.34□□□□□ -0.75
COPS3-207ENST00000477299 hDV102S1A0JD36 115 aa10.33□□□□□ -0.76
COPS3-207ENST00000477299 C16orf90A8MZG2 172 aa10.33□□□□□ -0.76
COPS3-207ENST00000477299 COX7A2LO14548 114 aa10.33□□□□□ -0.76
COPS3-207ENST00000477299 KRTAP10-1P60331 282 aa10.33□□□□□ -0.76
COPS3-207ENST00000477299 PMVKQ15126 192 aa10.33□□□□□ -0.76
COPS3-207ENST00000477299 PGPEP1Q9NXJ5 209 aa10.33□□□□□ -0.76
COPS3-207ENST00000477299 LRP1BQ9NZR2 4599 aa10.33□□□□□ -0.76
COPS3-207ENST00000477299 IGLV5-52A0A0A0MRZ9 124 aa10.32□□□□□ -0.76
COPS3-207ENST00000477299 LINC01549A6NIU2 74 aa10.32□□□□□ -0.76
COPS3-207ENST00000477299 FABP4P15090 132 aa10.32□□□□□ -0.76
COPS3-207ENST00000477299 FAM19A3Q7Z5A8 133 aa10.32□□□□□ -0.76
COPS3-207ENST00000477299 PAPPA-AS1Q5QFB9 102 aa10.31□□□□□ -0.76
COPS3-207ENST00000477299 IGHV1-58A0A0C4DH39 117 aa10.3□□□□□ -0.76
COPS3-207ENST00000477299 ATP5LO75964 103 aa10.3□□□□□ -0.76
COPS3-207ENST00000477299 MALP21145 153 aa10.3□□□□□ -0.76
COPS3-207ENST00000477299 IFI27L1Q96BM0 104 aa10.3□□□□□ -0.76
COPS3-207ENST00000477299 CDKN2A-AS1Q9UH64 79 aa10.3□□□□□ -0.76
COPS3-207ENST00000477299 A0A087WZ39 114 aa10.29□□□□□ -0.76
COPS3-207ENST00000477299 GVQW2A0A096LPI5 108 aaPredicted RBP10.29□□□□□ -0.76
COPS3-207ENST00000477299 C14orf177Q52M58 125 aa10.29□□□□□ -0.76
COPS3-207ENST00000477299 DNAH8Q96JB1 4490 aa10.29□□□□□ -0.76
COPS3-207ENST00000477299 IGLV4-69A0A075B6H9 119 aa10.28□□□□□ -0.76
COPS3-207ENST00000477299 LEPROTL1O95214 131 aa10.28□□□□□ -0.76
COPS3-207ENST00000477299 CFAP161Q6P656 301 aa10.28□□□□□ -0.76
COPS3-207ENST00000477299 IGHV3-64A0A075B6Q5 118 aa10.27□□□□□ -0.77
COPS3-207ENST00000477299 TINCRA0A1B0GVN0 87 aa10.27□□□□□ -0.77
COPS3-207ENST00000477299 GCSHP23434 173 aa10.27□□□□□ -0.77
COPS3-207ENST00000477299 COA6Q5JTJ3 125 aaKnown RBP10.27□□□□□ -0.77
COPS3-207ENST00000477299 CDPF1Q6NVV7 123 aa10.27□□□□□ -0.77
COPS3-207ENST00000477299 H0Y8G0 127 aa10.26□□□□□ -0.77
COPS3-207ENST00000477299 HERVK_113P63121 156 aa10.26□□□□□ -0.77
COPS3-207ENST00000477299 ORAOV1Q8WV07 137 aa10.26□□□□□ -0.77
COPS3-207ENST00000477299 GEMIN7Q9H840 131 aaKnown RBP10.26□□□□□ -0.77
COPS3-207ENST00000477299 FAM30AQ9NZY2 134 aa10.26□□□□□ -0.77
COPS3-207ENST00000477299 C11orf86A6NJI1 115 aa10.25□□□□□ -0.77
COPS3-207ENST00000477299 IGLC3P0DOY3 106 aa10.25□□□□□ -0.77
COPS3-207ENST00000477299 KIAA0087Q14695 138 aa10.25□□□□□ -0.77
COPS3-207ENST00000477299 LINC00469Q8N7U9 141 aa10.25□□□□□ -0.77
COPS3-207ENST00000477299 CHTOPQ9Y3Y2 248 aaKnown RBP10.25□□□□□ -0.77
COPS3-207ENST00000477299 HERC2O95714 4834 aa10.24□□□□□ -0.77
COPS3-207ENST00000477299 IGLV5-45A0A087WSX0 123 aa10.24□□□□□ -0.77
COPS3-207ENST00000477299 ZNF561-AS1K7EIQ3 104 aa10.24□□□□□ -0.77
COPS3-207ENST00000477299 CNBPP62633 177 aaKnown RBP10.24□□□□□ -0.77
COPS3-207ENST00000477299 HAMPP81172 84 aa10.24□□□□□ -0.77
COPS3-207ENST00000477299 SPAG11BQ08648 103 aa10.24□□□□□ -0.77
COPS3-207ENST00000477299 C9orf163Q8N9P6 203 aa10.24□□□□□ -0.77
COPS3-207ENST00000477299 CHAC1Q9BUX1 264 aa10.24□□□□□ -0.77
COPS3-207ENST00000477299 MRPL35Q9NZE8 188 aaKnown RBP10.24□□□□□ -0.77
COPS3-207ENST00000477299 SPINK8P0C7L1 97 aa10.23□□□□□ -0.77
COPS3-207ENST00000477299 ZNF22P17026 224 aaPredicted RBP10.23□□□□□ -0.77
COPS3-207ENST00000477299 C10orf25Q5T742 122 aa10.23□□□□□ -0.77
COPS3-207ENST00000477299 KRTAP17-1Q9BYP8 105 aa10.23□□□□□ -0.77
COPS3-207ENST00000477299 APOBP04114 4563 aaKnown RBP10.22□□□□□ -0.77
COPS3-207ENST00000477299 TRAV12-1A0A0B4J245 112 aa10.22□□□□□ -0.77
COPS3-207ENST00000477299 SMIM1B2RUZ4 78 aa10.22□□□□□ -0.77
COPS3-207ENST00000477299 APOMO95445 188 aa10.22□□□□□ -0.77
COPS3-207ENST00000477299 SEC11AP67812 179 aa10.22□□□□□ -0.77
COPS3-207ENST00000477299 ODF1Q14990 250 aa10.22□□□□□ -0.77
COPS3-207ENST00000477299 C2orf82Q6UX34 121 aa10.22□□□□□ -0.77
COPS3-207ENST00000477299 Q6ZRU5 148 aa10.22□□□□□ -0.77
COPS3-207ENST00000477299 PMCHL2Q9BQD1 86 aa10.22□□□□□ -0.77
COPS3-207ENST00000477299 PANO1I0J062 215 aa10.21□□□□□ -0.77
COPS3-207ENST00000477299 UNQ6190/PRO20217Q6UXQ8 127 aa10.21□□□□□ -0.77
COPS3-207ENST00000477299 SDIM1Q6ZPB5 146 aa10.21□□□□□ -0.77
COPS3-207ENST00000477299 OR10D4PQ8NGN7 298 aa10.21□□□□□ -0.77
COPS3-207ENST00000477299 TOMM7Q9P0U1 55 aa10.21□□□□□ -0.77
COPS3-207ENST00000477299 HSPB8Q9UJY1 196 aa10.21□□□□□ -0.77
COPS3-207ENST00000477299 SYCNQ0VAF6 134 aa10.2□□□□□ -0.78
COPS3-207ENST00000477299 LINC01561Q8N1V8 128 aa10.2□□□□□ -0.78
COPS3-207ENST00000477299 F8VRH5 84 aa10.19□□□□□ -0.78
COPS3-207ENST00000477299 XGP55808 180 aa10.19□□□□□ -0.78
COPS3-207ENST00000477299 C2orf48Q96LS8 159 aa10.19□□□□□ -0.78
COPS3-207ENST00000477299 CARD19Q96LW7 228 aa10.19□□□□□ -0.78
COPS3-207ENST00000477299 CAMK2N2Q96S95 79 aa10.19□□□□□ -0.78
COPS3-207ENST00000477299 KIAA1109Q2LD37 5005 aa10.19□□□□□ -0.78
COPS3-207ENST00000477299 CHTF8P0CG12 524 aa10.18□□□□□ -0.78
COPS3-207ENST00000477299 TMEM170BQ5T4T1 132 aa10.18□□□□□ -0.78
COPS3-207ENST00000477299 PACRGQ96M98 296 aaPredicted RBP10.18□□□□□ -0.78
COPS3-207ENST00000477299 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.17□□□□□ -0.78
COPS3-207ENST00000477299 HIST3H2BBQ8N257 126 aa10.17□□□□□ -0.78
COPS3-207ENST00000477299 MAP1LC3CQ9BXW4 147 aa10.17□□□□□ -0.78
COPS3-207ENST00000477299 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.17□□□□□ -0.78
COPS3-207ENST00000477299 SYS1-DBNDD2H3BUS1 97 aa10.16□□□□□ -0.78
COPS3-207ENST00000477299 C3orf79P0CE67 100 aa10.16□□□□□ -0.78
COPS3-207ENST00000477299 SNRPEP62304 92 aaKnown RBP10.16□□□□□ -0.78
COPS3-207ENST00000477299 C9orf116Q5BN46 136 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms