RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 HIGD1CA8MV81 97 aa7.09□□□□□ -1.27
HDAC6-219ENST00000476625 A8MWL6 223 aa7.09□□□□□ -1.27
HDAC6-219ENST00000476625 UBE2BP63146 152 aa7.09□□□□□ -1.27
HDAC6-219ENST00000476625 C9orf129Q5T035 196 aaKnown RBP7.09□□□□□ -1.27
HDAC6-219ENST00000476625 MUC17Q685J3 4493 aa7.09□□□□□ -1.27
HDAC6-219ENST00000476625 NDUFA1O15239 70 aa7.08□□□□□ -1.28
HDAC6-219ENST00000476625 UQCC3Q6UW78 93 aa7.08□□□□□ -1.28
HDAC6-219ENST00000476625 C2orf82Q6UX34 121 aa7.08□□□□□ -1.28
HDAC6-219ENST00000476625 FAM231DQ6ZW35 169 aa7.08□□□□□ -1.28
HDAC6-219ENST00000476625 OR10D4PQ8NGN7 298 aa7.08□□□□□ -1.28
HDAC6-219ENST00000476625 RETNLBQ9BQ08 111 aa7.08□□□□□ -1.28
HDAC6-219ENST00000476625 CSDC2Q9Y534 153 aaKnown RBP7.08□□□□□ -1.28
HDAC6-219ENST00000476625 A0A087X002 238 aa7.07□□□□□ -1.28
HDAC6-219ENST00000476625 IGHV3OR16-9A0A0B4J2B5 98 aa7.07□□□□□ -1.28
HDAC6-219ENST00000476625 A0A1B0GUT8 65 aa7.07□□□□□ -1.28
HDAC6-219ENST00000476625 VCYO14598 125 aa7.07□□□□□ -1.28
HDAC6-219ENST00000476625 SUMO2P61956 95 aaKnown RBP7.07□□□□□ -1.28
HDAC6-219ENST00000476625 MRPL51Q4U2R6 128 aaKnown RBP7.07□□□□□ -1.28
HDAC6-219ENST00000476625 BORCS7Q96B45 105 aa7.07□□□□□ -1.28
HDAC6-219ENST00000476625 SMIM7Q9BQ49 75 aa7.07□□□□□ -1.28
HDAC6-219ENST00000476625 A0A0U1RQV1 116 aa7.06□□□□□ -1.28
HDAC6-219ENST00000476625 ZNF727A8MUV8 499 aa7.06□□□□□ -1.28
HDAC6-219ENST00000476625 SRP19P09132 144 aaKnown RBP7.06□□□□□ -1.28
HDAC6-219ENST00000476625 TLX1NBP0CAT3 122 aa7.06□□□□□ -1.28
HDAC6-219ENST00000476625 KIAA0087Q14695 138 aa7.06□□□□□ -1.28
HDAC6-219ENST00000476625 TMEM241Q24JQ0 296 aa7.06□□□□□ -1.28
HDAC6-219ENST00000476625 IFITM2Q01629 132 aa7.05□□□□□ -1.28
HDAC6-219ENST00000476625 CT83Q5H943 113 aa7.05□□□□□ -1.28
HDAC6-219ENST00000476625 LINC00469Q8N7U9 141 aa7.05□□□□□ -1.28
HDAC6-219ENST00000476625 TSKUQ8WUA8 353 aa7.05□□□□□ -1.28
HDAC6-219ENST00000476625 IMMP2LQ96T52 175 aa7.05□□□□□ -1.28
HDAC6-219ENST00000476625 ANAPC11Q9NYG5 84 aa7.05□□□□□ -1.28
HDAC6-219ENST00000476625 IFITM10A6NMD0 228 aa7.04□□□□□ -1.28
HDAC6-219ENST00000476625 TCAPO15273 167 aa7.04□□□□□ -1.28
HDAC6-219ENST00000476625 ZC2HC1BQ5TFG8 222 aa7.04□□□□□ -1.28
HDAC6-219ENST00000476625 LINC01551Q86U37 167 aa7.04□□□□□ -1.28
HDAC6-219ENST00000476625 TIMM21Q9BVV7 248 aa7.04□□□□□ -1.28
HDAC6-219ENST00000476625 NAT8Q9UHE5 227 aa7.04□□□□□ -1.28
HDAC6-219ENST00000476625 RPL13AP40429 203 aaKnown RBP7.03□□□□□ -1.28
HDAC6-219ENST00000476625 KIR2DL4Q99706 377 aa7.03□□□□□ -1.28
HDAC6-219ENST00000476625 V9GYV3 84 aa7.03□□□□□ -1.28
HDAC6-219ENST00000476625 LINC00862A6NCI5 91 aa7.02□□□□□ -1.29
HDAC6-219ENST00000476625 PNRC1Q12796 327 aaPredicted RBP7.02□□□□□ -1.29
HDAC6-219ENST00000476625 OSTCQ9NRP0 149 aa7.02□□□□□ -1.29
HDAC6-219ENST00000476625 ZNF861PO60384 105 aa7.01□□□□□ -1.29
HDAC6-219ENST00000476625 PPP1R2P9O14990 202 aa7□□□□□ -1.29
HDAC6-219ENST00000476625 TNFRSF6BO95407 300 aa7□□□□□ -1.29
HDAC6-219ENST00000476625 NPYP01303 97 aa7□□□□□ -1.29
HDAC6-219ENST00000476625 HBBP68871 147 aa7□□□□□ -1.29
HDAC6-219ENST00000476625 RIGQ13278 110 aa7□□□□□ -1.29
HDAC6-219ENST00000476625 LINC00242Q5T6M2 205 aa7□□□□□ -1.29
HDAC6-219ENST00000476625 FAM104BQ5XKR9 115 aa7□□□□□ -1.29
HDAC6-219ENST00000476625 SMIM2Q9BVW6 85 aa7□□□□□ -1.29
HDAC6-219ENST00000476625 CTDSP1Q9GZU7 261 aa7□□□□□ -1.29
HDAC6-219ENST00000476625 XAGE1AQ9HD64 81 aa7□□□□□ -1.29
HDAC6-219ENST00000476625 CARHSP1Q9Y2V2 147 aaKnown RBP7□□□□□ -1.29
HDAC6-219ENST00000476625 C22orf24Q9Y442 160 aa7□□□□□ -1.29
HDAC6-219ENST00000476625 NDUFC2-KCTD14E9PQ53 114 aa6.99□□□□□ -1.29
HDAC6-219ENST00000476625 SMAGPQ0VAQ4 97 aa6.99□□□□□ -1.29
HDAC6-219ENST00000476625 KRTAP13-2Q52LG2 175 aa6.99□□□□□ -1.29
HDAC6-219ENST00000476625 TMEM18Q96B42 140 aa6.99□□□□□ -1.29
HDAC6-219ENST00000476625 IGLV4-3A0A075B6K6 122 aa6.98□□□□□ -1.29
HDAC6-219ENST00000476625 TGIF2-C20orf24A0A0A6YYL0 155 aa6.98□□□□□ -1.29
HDAC6-219ENST00000476625 D6R8Y8 96 aa6.98□□□□□ -1.29
HDAC6-219ENST00000476625 F8WDY8 70 aa6.98□□□□□ -1.29
HDAC6-219ENST00000476625 MRPS36P82909 103 aaKnown RBP6.98□□□□□ -1.29
HDAC6-219ENST00000476625 SRSF3P84103 164 aaKnown RBP6.98□□□□□ -1.29
HDAC6-219ENST00000476625 NDUFA5Q16718 116 aa6.98□□□□□ -1.29
HDAC6-219ENST00000476625 TYMSOSQ8TAI1 123 aa6.98□□□□□ -1.29
HDAC6-219ENST00000476625 SEC11CQ9BY50 192 aa6.98□□□□□ -1.29
HDAC6-219ENST00000476625 SPANXA1Q9NS26 97 aa6.98□□□□□ -1.29
HDAC6-219ENST00000476625 TRBV30A0A0K0K1B3 111 aa6.97□□□□□ -1.29
HDAC6-219ENST00000476625 TMEM218A2RU14 115 aa6.97□□□□□ -1.29
HDAC6-219ENST00000476625 C9JQL5 133 aa6.97□□□□□ -1.29
HDAC6-219ENST00000476625 MT-ND4LP03901 98 aa6.97□□□□□ -1.29
HDAC6-219ENST00000476625 CKS2P33552 79 aa6.97□□□□□ -1.29
HDAC6-219ENST00000476625 RPL23P62829 140 aaKnown RBP6.97□□□□□ -1.29
HDAC6-219ENST00000476625 ADIRFQ15847 76 aa6.97□□□□□ -1.29
HDAC6-219ENST00000476625 MRPL54Q6P161 138 aaKnown RBP6.97□□□□□ -1.29
HDAC6-219ENST00000476625 COMMD7Q86VX2 200 aa6.97□□□□□ -1.29
HDAC6-219ENST00000476625 ANAPC16Q96DE5 110 aa6.97□□□□□ -1.29
HDAC6-219ENST00000476625 C20orf78Q9BR46 151 aa6.97□□□□□ -1.29
HDAC6-219ENST00000476625 TOMM7Q9P0U1 55 aa6.97□□□□□ -1.29
HDAC6-219ENST00000476625 TRBV24-1A0A075B6N3 115 aa6.96□□□□□ -1.3
HDAC6-219ENST00000476625 RPL37AP8A6NKH3 93 aa6.96□□□□□ -1.3
HDAC6-219ENST00000476625 F8W036 122 aa6.96□□□□□ -1.3
HDAC6-219ENST00000476625 PACRGQ96M98 296 aaPredicted RBP6.96□□□□□ -1.3
HDAC6-219ENST00000476625 NAT8BQ9UHF3 227 aa6.96□□□□□ -1.3
HDAC6-219ENST00000476625 A0A1B0GW15 77 aa6.95□□□□□ -1.3
HDAC6-219ENST00000476625 PPP1R17O96001 155 aa6.95□□□□□ -1.3
HDAC6-219ENST00000476625 LINC00173Q6ZV60 143 aa6.95□□□□□ -1.3
HDAC6-219ENST00000476625 GAGE10A6NGK3 116 aa6.94□□□□□ -1.3
HDAC6-219ENST00000476625 S100A8P05109 93 aa6.94□□□□□ -1.3
HDAC6-219ENST00000476625 RPL32P62910 135 aaKnown RBP6.94□□□□□ -1.3
HDAC6-219ENST00000476625 SMIM27A0A1W2PRY6 76 aa6.93□□□□□ -1.3
HDAC6-219ENST00000476625 A6NJY4 79 aa6.93□□□□□ -1.3
HDAC6-219ENST00000476625 NUPR1O60356 82 aa6.93□□□□□ -1.3
HDAC6-219ENST00000476625 BCE1O60756 84 aa6.93□□□□□ -1.3
HDAC6-219ENST00000476625 SCO1O75880 301 aa6.93□□□□□ -1.3
HDAC6-219ENST00000476625 CRYGAP11844 174 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms