RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 GAGE2BQ13066 116 aa6.73□□□□□ -1.33
SEC13-214ENST00000476597 PRELID3AQ96N28 172 aa6.73□□□□□ -1.33
SEC13-214ENST00000476597 CAMK2N2Q96S95 79 aa6.73□□□□□ -1.33
SEC13-214ENST00000476597 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.72□□□□□ -1.33
SEC13-214ENST00000476597 RAB5AP20339 215 aa6.72□□□□□ -1.33
SEC13-214ENST00000476597 PNRC1Q12796 327 aaPredicted RBP6.72□□□□□ -1.33
SEC13-214ENST00000476597 OR10D4PQ8NGN7 298 aa6.72□□□□□ -1.33
SEC13-214ENST00000476597 A0A1W2PNN7 141 aa6.71□□□□□ -1.34
SEC13-214ENST00000476597 MT-ND4LP03901 98 aa6.71□□□□□ -1.34
SEC13-214ENST00000476597 RAB14P61106 215 aa6.71□□□□□ -1.34
SEC13-214ENST00000476597 SPAG11BQ08648 103 aa6.71□□□□□ -1.34
SEC13-214ENST00000476597 RNF151Q2KHN1 245 aa6.71□□□□□ -1.34
SEC13-214ENST00000476597 ANAPC16Q96DE5 110 aa6.71□□□□□ -1.34
SEC13-214ENST00000476597 PLA2G2DQ9UNK4 145 aa6.71□□□□□ -1.34
SEC13-214ENST00000476597 PYGO1Q9Y3Y4 419 aa6.71□□□□□ -1.34
SEC13-214ENST00000476597 IFITM10A6NMD0 228 aa6.7□□□□□ -1.34
SEC13-214ENST00000476597 F8WDY8 70 aa6.7□□□□□ -1.34
SEC13-214ENST00000476597 SRSF9Q13242 221 aaKnown RBP eCLIP6.7□□□□□ -1.34
SEC13-214ENST00000476597 SPINK6Q6UWN8 80 aa6.7□□□□□ -1.34
SEC13-214ENST00000476597 Q6ZRP5 223 aa6.7□□□□□ -1.34
SEC13-214ENST00000476597 ORAOV1Q8WV07 137 aa6.7□□□□□ -1.34
SEC13-214ENST00000476597 LINC01600Q96MT4 127 aa6.7□□□□□ -1.34
SEC13-214ENST00000476597 MRPL35Q9NZE8 188 aaKnown RBP6.7□□□□□ -1.34
SEC13-214ENST00000476597 LAMTOR2Q9Y2Q5 125 aa6.7□□□□□ -1.34
SEC13-214ENST00000476597 A0A0J9YXV3 536 aa6.69□□□□□ -1.34
SEC13-214ENST00000476597 LOC389332A0A1B0GUA5 103 aa6.69□□□□□ -1.34
SEC13-214ENST00000476597 IFI27P40305 119 aaPredicted RBP6.69□□□□□ -1.34
SEC13-214ENST00000476597 LRP2P98164 4655 aa6.69□□□□□ -1.34
SEC13-214ENST00000476597 IGLV4-3A0A075B6K6 122 aa6.68□□□□□ -1.34
SEC13-214ENST00000476597 A0A087WZ39 114 aa6.68□□□□□ -1.34
SEC13-214ENST00000476597 C9orf116Q5BN46 136 aaPredicted RBP6.68□□□□□ -1.34
SEC13-214ENST00000476597 LINC00242Q5T6M2 205 aa6.68□□□□□ -1.34
SEC13-214ENST00000476597 C10orf25Q5T742 122 aa6.68□□□□□ -1.34
SEC13-214ENST00000476597 Q8N8P6 123 aa6.68□□□□□ -1.34
SEC13-214ENST00000476597 IMMP2LQ96T52 175 aa6.68□□□□□ -1.34
SEC13-214ENST00000476597 NDUFA1O15239 70 aa6.67□□□□□ -1.34
SEC13-214ENST00000476597 RPL18AQ02543 176 aaKnown RBP6.67□□□□□ -1.34
SEC13-214ENST00000476597 KIAA0087Q14695 138 aa6.67□□□□□ -1.34
SEC13-214ENST00000476597 CLLU1Q5K131 121 aa6.67□□□□□ -1.34
SEC13-214ENST00000476597 UNQ6190/PRO20217Q6UXQ8 127 aa6.67□□□□□ -1.34
SEC13-214ENST00000476597 TMEM141Q96I45 108 aa6.67□□□□□ -1.34
SEC13-214ENST00000476597 MAP1LC3AQ9H492 121 aa6.67□□□□□ -1.34
SEC13-214ENST00000476597 TGIF2-C20orf24A0A0A6YYL0 155 aa6.66□□□□□ -1.34
SEC13-214ENST00000476597 TLX1NBP0CAT3 122 aa6.66□□□□□ -1.34
SEC13-214ENST00000476597 UBE2D1P51668 147 aa6.66□□□□□ -1.34
SEC13-214ENST00000476597 KRTAP10-8P60410 259 aa6.66□□□□□ -1.34
SEC13-214ENST00000476597 C2orf66Q6UXQ4 117 aa6.66□□□□□ -1.34
SEC13-214ENST00000476597 C6orf48Q9UBA6 75 aa6.66□□□□□ -1.34
SEC13-214ENST00000476597 ORMDL2Q53FV1 153 aa6.65□□□□□ -1.34
SEC13-214ENST00000476597 REG3GQ6UW15 175 aa6.65□□□□□ -1.34
SEC13-214ENST00000476597 TEX43Q6ZNM6 134 aa6.65□□□□□ -1.34
SEC13-214ENST00000476597 PHF5AQ7RTV0 110 aaKnown RBP6.65□□□□□ -1.34
SEC13-214ENST00000476597 LINC01561Q8N1V8 128 aa6.65□□□□□ -1.34
SEC13-214ENST00000476597 AMELXQ99217 191 aa6.65□□□□□ -1.34
SEC13-214ENST00000476597 PSORS1C2Q9UIG4 136 aa6.65□□□□□ -1.34
SEC13-214ENST00000476597 CYSLTR1Q9Y271 337 aa6.65□□□□□ -1.34
SEC13-214ENST00000476597 IGIPA6NJ69 53 aa6.64□□□□□ -1.35
SEC13-214ENST00000476597 K7EMI3 77 aa6.64□□□□□ -1.35
SEC13-214ENST00000476597 NPSP0C0P6 89 aa6.64□□□□□ -1.35
SEC13-214ENST00000476597 ZC2HC1BQ5TFG8 222 aa6.64□□□□□ -1.35
SEC13-214ENST00000476597 LINC00173Q6ZV60 143 aa6.64□□□□□ -1.35
SEC13-214ENST00000476597 VCX2Q9H322 139 aa6.64□□□□□ -1.35
SEC13-214ENST00000476597 TMEM218A2RU14 115 aa6.63□□□□□ -1.35
SEC13-214ENST00000476597 ADCYAP1P18509 176 aa6.63□□□□□ -1.35
SEC13-214ENST00000476597 UQCC3Q6UW78 93 aa6.63□□□□□ -1.35
SEC13-214ENST00000476597 Q6ZN92 141 aa6.63□□□□□ -1.35
SEC13-214ENST00000476597 FAM19A3Q7Z5A8 133 aa6.63□□□□□ -1.35
SEC13-214ENST00000476597 C2orf88Q9BSF0 95 aa6.63□□□□□ -1.35
SEC13-214ENST00000476597 CTDSP1Q9GZU7 261 aa6.63□□□□□ -1.35
SEC13-214ENST00000476597 NXT2Q9NPJ8 142 aaKnown RBP6.63□□□□□ -1.35
SEC13-214ENST00000476597 TRBV30A0A0K0K1B3 111 aa6.62□□□□□ -1.35
SEC13-214ENST00000476597 FAM168BA1KXE4 195 aa6.62□□□□□ -1.35
SEC13-214ENST00000476597 MT-ND6P03923 174 aa6.62□□□□□ -1.35
SEC13-214ENST00000476597 C2orf82Q6UX34 121 aa6.62□□□□□ -1.35
SEC13-214ENST00000476597 G0S2P27469 103 aa6.61□□□□□ -1.35
SEC13-214ENST00000476597 IFITM2Q01629 132 aa6.61□□□□□ -1.35
SEC13-214ENST00000476597 KIAA1644Q3SXP7 199 aa6.61□□□□□ -1.35
SEC13-214ENST00000476597 GAGE2EQ4V326 116 aa6.61□□□□□ -1.35
SEC13-214ENST00000476597 C1orf137Q5JT78 98 aa6.61□□□□□ -1.35
SEC13-214ENST00000476597 KRTAP7-1Q8IUC3 87 aa6.61□□□□□ -1.35
SEC13-214ENST00000476597 GAGE2DQ9UEU5 116 aa6.61□□□□□ -1.35
SEC13-214ENST00000476597 TRAV9-1A0A075B6T8 112 aa6.6□□□□□ -1.35
SEC13-214ENST00000476597 NDUFC2-KCTD14E9PQ53 114 aa6.6□□□□□ -1.35
SEC13-214ENST00000476597 ODF1Q14990 250 aa6.6□□□□□ -1.35
SEC13-214ENST00000476597 KRTAP11-1Q8IUC1 163 aa6.6□□□□□ -1.35
SEC13-214ENST00000476597 TOMM6Q96B49 74 aa6.6□□□□□ -1.35
SEC13-214ENST00000476597 PACRGQ96M98 296 aaPredicted RBP6.6□□□□□ -1.35
SEC13-214ENST00000476597 TIMM17AQ99595 171 aa6.6□□□□□ -1.35
SEC13-214ENST00000476597 C6orf226Q5I0X4 101 aa6.59□□□□□ -1.35
SEC13-214ENST00000476597 PAPPA-AS1Q5QFB9 102 aa6.59□□□□□ -1.35
SEC13-214ENST00000476597 SEC11CQ9BY50 192 aa6.59□□□□□ -1.35
SEC13-214ENST00000476597 IGLV7-43P04211 117 aa6.58□□□□□ -1.36
SEC13-214ENST00000476597 PRSS2P07478 247 aa6.58□□□□□ -1.36
SEC13-214ENST00000476597 HERVK_113P63121 156 aa6.58□□□□□ -1.36
SEC13-214ENST00000476597 SEC11AP67812 179 aa6.58□□□□□ -1.36
SEC13-214ENST00000476597 C9orf129Q5T035 196 aaKnown RBP6.58□□□□□ -1.36
SEC13-214ENST00000476597 ERASQ7Z444 233 aa6.58□□□□□ -1.36
SEC13-214ENST00000476597 FAM19A5Q7Z5A7 132 aaPredicted RBP6.58□□□□□ -1.36
SEC13-214ENST00000476597 Q8IZM0 81 aa6.58□□□□□ -1.36
SEC13-214ENST00000476597 GNB1LQ9BYB4 327 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms