RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	ODF3	Q96PU9	254 aa		4.58	□□□□□ -1.68
HNRNPU-208	ENST00000475997	HIGD2A	Q9BW72	106 aa		4.58	□□□□□ -1.68
HNRNPU-208	ENST00000475997	TMEM89	A2RUT3	159 aa		4.58	□□□□□ -1.68
HNRNPU-208	ENST00000475997	AJUBA	Q96IF1	538 aa		4.58	□□□□□ -1.68
HNRNPU-208	ENST00000475997	KLK12	Q9UKR0	248 aa		4.58	□□□□□ -1.68
HNRNPU-208	ENST00000475997	PRY	O14603	147 aa		4.57	□□□□□ -1.68
HNRNPU-208	ENST00000475997	C9orf85	Q96MD7	179 aa		4.57	□□□□□ -1.68
HNRNPU-208	ENST00000475997	PYGO1	Q9Y3Y4	419 aa		4.57	□□□□□ -1.68
HNRNPU-208	ENST00000475997	SLPI	P03973	132 aa		4.57	□□□□□ -1.68
HNRNPU-208	ENST00000475997	GPHB5	Q86YW7	130 aa		4.57	□□□□□ -1.68
HNRNPU-208	ENST00000475997	C1orf158	Q8N1D5	194 aa		4.57	□□□□□ -1.68
HNRNPU-208	ENST00000475997	IGLV4-3	A0A075B6K6	122 aa		4.57	□□□□□ -1.68
HNRNPU-208	ENST00000475997	CCL24	O00175	119 aa		4.57	□□□□□ -1.68
HNRNPU-208	ENST00000475997	FBXL19-AS1	Q494R0	122 aa		4.57	□□□□□ -1.68
HNRNPU-208	ENST00000475997	ODF3B	A8MYP8	253 aa		4.57	□□□□□ -1.68
HNRNPU-208	ENST00000475997	DHRS4-AS1	Q9P1J3	65 aa		4.57	□□□□□ -1.68
HNRNPU-208	ENST00000475997	SMAD5-AS1	Q9Y6J3	95 aa		4.57	□□□□□ -1.68
HNRNPU-208	ENST00000475997	POLQ	O75417	2590 aa		4.57	□□□□□ -1.68
HNRNPU-208	ENST00000475997	CELA1	Q9UNI1	258 aa		4.56	□□□□□ -1.68
HNRNPU-208	ENST00000475997	UBE2D4	Q9Y2X8	147 aa		4.56	□□□□□ -1.68
HNRNPU-208	ENST00000475997		U3KQK5	164 aa		4.56	□□□□□ -1.68
HNRNPU-208	ENST00000475997	ZFYVE26	Q68DK2	2539 aa		4.56	□□□□□ -1.68
HNRNPU-208	ENST00000475997	INSL3	P51460	131 aa		4.56	□□□□□ -1.68
HNRNPU-208	ENST00000475997	CDSN	Q15517	529 aa		4.56	□□□□□ -1.68
HNRNPU-208	ENST00000475997	C9orf66	Q5T8R8	295 aa		4.56	□□□□□ -1.68
HNRNPU-208	ENST00000475997	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.56	□□□□□ -1.68
HNRNPU-208	ENST00000475997		Q6ZQY7	126 aa		4.56	□□□□□ -1.68
HNRNPU-208	ENST00000475997	WFDC13	Q8IUB5	93 aa		4.56	□□□□□ -1.68
HNRNPU-208	ENST00000475997		A0A0J9YX75	114 aa		4.56	□□□□□ -1.68
HNRNPU-208	ENST00000475997	GAS8-AS1	O95177	125 aa		4.56	□□□□□ -1.68
HNRNPU-208	ENST00000475997	LOC400499	M0QZD8	3231 aa		4.56	□□□□□ -1.68
HNRNPU-208	ENST00000475997	LOC107984640	A0A0U1RRK4	108 aa		4.56	□□□□□ -1.68
HNRNPU-208	ENST00000475997	RPS28	P62857	69 aa	Known RBP	4.56	□□□□□ -1.68
HNRNPU-208	ENST00000475997	SIRPD	Q9H106	197 aa		4.56	□□□□□ -1.68
HNRNPU-208	ENST00000475997	LRRK2	Q5S007	2527 aa		4.56	□□□□□ -1.68
HNRNPU-208	ENST00000475997	TRBV7-7	A0A0K0K1E9	115 aa		4.55	□□□□□ -1.68
HNRNPU-208	ENST00000475997	RNF223	E7ERA6	249 aa		4.55	□□□□□ -1.68
HNRNPU-208	ENST00000475997	APRG1	Q8IVJ8	170 aa		4.55	□□□□□ -1.68
HNRNPU-208	ENST00000475997	ADGRG4	Q8IZF6	3080 aa		4.55	□□□□□ -1.68
HNRNPU-208	ENST00000475997	C3orf84	H3BNL1	204 aa		4.55	□□□□□ -1.68
HNRNPU-208	ENST00000475997	CCDC140	Q96MF4	163 aa		4.55	□□□□□ -1.68
HNRNPU-208	ENST00000475997	LIMD2	Q9BT23	127 aa		4.55	□□□□□ -1.68
HNRNPU-208	ENST00000475997	TRBV6-5	A0A0K0K1A5	114 aa		4.55	□□□□□ -1.68
HNRNPU-208	ENST00000475997	CXCL6	P80162	114 aa		4.55	□□□□□ -1.68
HNRNPU-208	ENST00000475997	ESRG	Q1W209	222 aa		4.55	□□□□□ -1.68
HNRNPU-208	ENST00000475997	NTM-AS1	Q6ZSK4	140 aa		4.55	□□□□□ -1.68
HNRNPU-208	ENST00000475997	WDFY3	Q8IZQ1	3526 aa		4.54	□□□□□ -1.68
HNRNPU-208	ENST00000475997	UNQ9165/PRO28630	Q6UXU0	137 aa		4.54	□□□□□ -1.68
HNRNPU-208	ENST00000475997	ABCA2	Q9BZC7	2435 aa		4.54	□□□□□ -1.68
HNRNPU-208	ENST00000475997	IGF1	P05019	195 aa		4.54	□□□□□ -1.68
HNRNPU-208	ENST00000475997	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.54	□□□□□ -1.68
HNRNPU-208	ENST00000475997	C5orf56	Q8N8D9	126 aa		4.54	□□□□□ -1.68
HNRNPU-208	ENST00000475997	AKAP13	Q12802	2813 aa		4.54	□□□□□ -1.68
HNRNPU-208	ENST00000475997	REG3A	Q06141	175 aa		4.54	□□□□□ -1.68
HNRNPU-208	ENST00000475997	IGHV4-61	A0A0C4DH41	118 aa		4.54	□□□□□ -1.68
HNRNPU-208	ENST00000475997	IGHV4-38-2	P0DP08	117 aa		4.54	□□□□□ -1.68
HNRNPU-208	ENST00000475997	LMO4	P61968	165 aa		4.54	□□□□□ -1.68
HNRNPU-208	ENST00000475997	FAM19A1	Q7Z5A9	133 aa		4.54	□□□□□ -1.68
HNRNPU-208	ENST00000475997	MAPK1IP1L	Q8NDC0	245 aa		4.54	□□□□□ -1.68
HNRNPU-208	ENST00000475997	RNF185	Q96GF1	192 aa		4.54	□□□□□ -1.68
HNRNPU-208	ENST00000475997	LINC00208	Q96KT6	92 aa		4.53	□□□□□ -1.68
HNRNPU-208	ENST00000475997	AGRN	O00468	2067 aa		4.53	□□□□□ -1.68
HNRNPU-208	ENST00000475997		F8W735	103 aa	Predicted RBP	4.53	□□□□□ -1.68
HNRNPU-208	ENST00000475997	C11orf21	Q9P2W6	132 aa		4.53	□□□□□ -1.68
HNRNPU-208	ENST00000475997	CENPE	Q02224	2701 aa		4.53	□□□□□ -1.68
HNRNPU-208	ENST00000475997	PSPHP1	O15172	72 aa		4.53	□□□□□ -1.68
HNRNPU-208	ENST00000475997	SHISA2	Q6UWI4	295 aa		4.53	□□□□□ -1.68
HNRNPU-208	ENST00000475997	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.53	□□□□□ -1.68
HNRNPU-208	ENST00000475997	LINC00467	Q9BRT7	94 aa		4.53	□□□□□ -1.68
HNRNPU-208	ENST00000475997		A0A096LNJ9	63 aa		4.53	□□□□□ -1.68
HNRNPU-208	ENST00000475997	TRBV7-6	A0A0J9YX20	115 aa		4.53	□□□□□ -1.68
HNRNPU-208	ENST00000475997	UBE2D3	P61077	147 aa		4.53	□□□□□ -1.68
HNRNPU-208	ENST00000475997		A0A0J9YWU9	116 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997		M0R378	163 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	NANOS2	P60321	138 aa	Known RBP	4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997		Q8N6K4	173 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	PPDPF	Q9H3Y8	114 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	ABCA12	Q86UK0	2595 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	DMXL2	Q8TDJ6	3036 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	SLURP1	P55000	103 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	C11orf71	Q6IPW1	123 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	TMEM254	Q8TBM7	123 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	FAM30A	Q9NZY2	134 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	UBE2D1	P51668	147 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	SMIM11B	Q8TCY0	68 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	DOPEY1	Q5JWR5	2465 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	TACC2	O95359	2948 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	hDV103S1	A0JD37	113 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997		A8MZ25	164 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	BCE1	O60756	84 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	COX17	Q14061	63 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	LINC00269	Q8N2A0	174 aa		4.52	□□□□□ -1.69
HNRNPU-208	ENST00000475997	TRBV10-3	A0A0K0K1G6	114 aa		4.51	□□□□□ -1.69
HNRNPU-208	ENST00000475997		Q8N3U1	123 aa		4.51	□□□□□ -1.69
HNRNPU-208	ENST00000475997	LRCOL1	A6NCL2	159 aa		4.51	□□□□□ -1.69
HNRNPU-208	ENST00000475997		M0QY20	66 aa		4.51	□□□□□ -1.69
HNRNPU-208	ENST00000475997		A0A096LNI7	61 aa		4.51	□□□□□ -1.69
HNRNPU-208	ENST00000475997	KALRN	O60229	2985 aa		4.51	□□□□□ -1.69
HNRNPU-208	ENST00000475997	HIVEP2	P31629	2446 aa		4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms