RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 IGLV4-3A0A075B6K6 122 aa15.29■□□□□ 0.04
CPNE1-223ENST00000475146 A0A087WYN8 130 aa15.29■□□□□ 0.04
CPNE1-223ENST00000475146 RPL37AP61513 92 aaKnown RBP15.29■□□□□ 0.04
CPNE1-223ENST00000475146 C2orf66Q6UXQ4 117 aa15.29■□□□□ 0.04
CPNE1-223ENST00000475146 TMEM141Q96I45 108 aa15.29■□□□□ 0.04
CPNE1-223ENST00000475146 MAJINQ3KP22 176 aa15.28■□□□□ 0.04
CPNE1-223ENST00000475146 PKIGQ9Y2B9 76 aa15.28■□□□□ 0.04
CPNE1-223ENST00000475146 K7EMI3 77 aa15.27■□□□□ 0.04
CPNE1-223ENST00000475146 SRRM2Q9UQ35 2752 aaKnown RBP15.26■□□□□ 0.03
CPNE1-223ENST00000475146 KRTAP10-4P60372 401 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-223ENST00000475146 SPAG11BQ08648 103 aa15.26■□□□□ 0.03
CPNE1-223ENST00000475146 CAMK2N2Q96S95 79 aa15.26■□□□□ 0.03
CPNE1-223ENST00000475146 GNB1LQ9BYB4 327 aa15.26■□□□□ 0.03
CPNE1-223ENST00000475146 A0A096LNI7 61 aa15.25■□□□□ 0.03
CPNE1-223ENST00000475146 IGHV3OR16-9A0A0B4J2B5 98 aa15.25■□□□□ 0.03
CPNE1-223ENST00000475146 Q6ZN92 141 aa15.25■□□□□ 0.03
CPNE1-223ENST00000475146 TEX43Q6ZNM6 134 aa15.25■□□□□ 0.03
CPNE1-223ENST00000475146 TGIF2-C20orf24A0A0A6YYL0 155 aa15.24■□□□□ 0.03
CPNE1-223ENST00000475146 COX19Q49B96 90 aa15.24■□□□□ 0.03
CPNE1-223ENST00000475146 Q6ZRU5 148 aa15.24■□□□□ 0.03
CPNE1-223ENST00000475146 ORAOV1Q8WV07 137 aa15.24■□□□□ 0.03
CPNE1-223ENST00000475146 C2orf88Q9BSF0 95 aa15.24■□□□□ 0.03
CPNE1-223ENST00000475146 C2orf48Q96LS8 159 aa15.23■□□□□ 0.03
CPNE1-223ENST00000475146 PLAC8Q9NZF1 115 aa15.23■□□□□ 0.03
CPNE1-223ENST00000475146 OR10D4PQ8NGN7 298 aa15.22■□□□□ 0.03
CPNE1-223ENST00000475146 APOC3P02656 99 aa15.21■□□□□ 0.03
CPNE1-223ENST00000475146 MT-ND6P03923 174 aa15.21■□□□□ 0.03
CPNE1-223ENST00000475146 G0S2P27469 103 aa15.21■□□□□ 0.03
CPNE1-223ENST00000475146 NDUFA5Q16718 116 aa15.21■□□□□ 0.03
CPNE1-223ENST00000475146 STPG4Q8N801 248 aa15.21■□□□□ 0.03
CPNE1-223ENST00000475146 LINC00474Q9P2X8 69 aa15.21■□□□□ 0.03
CPNE1-223ENST00000475146 LINC00242Q5T6M2 205 aa15.2■□□□□ 0.02
CPNE1-223ENST00000475146 ZC2HC1BQ5TFG8 222 aa15.2■□□□□ 0.02
CPNE1-223ENST00000475146 ALKBH7Q9BT30 221 aaPredicted RBP15.2■□□□□ 0.02
CPNE1-223ENST00000475146 MRPL18Q9H0U6 180 aaKnown RBP15.2■□□□□ 0.02
CPNE1-223ENST00000475146 VCX2Q9H322 139 aa15.2■□□□□ 0.02
CPNE1-223ENST00000475146 IGIPA6NJ69 53 aa15.19■□□□□ 0.02
CPNE1-223ENST00000475146 UBE2D1P51668 147 aa15.19■□□□□ 0.02
CPNE1-223ENST00000475146 FABP9Q0Z7S8 132 aa15.19■□□□□ 0.02
CPNE1-223ENST00000475146 LOC107984640A0A0U1RRK4 108 aa15.18■□□□□ 0.02
CPNE1-223ENST00000475146 NPSP0C0P6 89 aa15.18■□□□□ 0.02
CPNE1-223ENST00000475146 LINC00173Q6ZV60 143 aa15.18■□□□□ 0.02
CPNE1-223ENST00000475146 GAGE2BQ13066 116 aa15.17■□□□□ 0.02
CPNE1-223ENST00000475146 AMELXQ99217 191 aa15.17■□□□□ 0.02
CPNE1-223ENST00000475146 A0A087WZ39 114 aa15.16■□□□□ 0.02
CPNE1-223ENST00000475146 SNAPINO95295 136 aa15.16■□□□□ 0.02
CPNE1-223ENST00000475146 PAPPA-AS1Q5QFB9 102 aa15.16■□□□□ 0.02
CPNE1-223ENST00000475146 SVBPQ8N300 66 aa15.16■□□□□ 0.02
CPNE1-223ENST00000475146 C7orf33Q8WU49 177 aa15.16■□□□□ 0.02
CPNE1-223ENST00000475146 TOMM6Q96B49 74 aa15.16■□□□□ 0.02
CPNE1-223ENST00000475146 PTTG1IPP53801 180 aa15.15■□□□□ 0.02
CPNE1-223ENST00000475146 J3QL48 77 aa15.14■□□□□ 0.01
CPNE1-223ENST00000475146 TIMM17AQ99595 171 aa15.14■□□□□ 0.01
CPNE1-223ENST00000475146 A0A0J9YXV3 536 aa15.13■□□□□ 0.01
CPNE1-223ENST00000475146 F8WDY8 70 aa15.13■□□□□ 0.01
CPNE1-223ENST00000475146 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.13■□□□□ 0.01
CPNE1-223ENST00000475146 NDUFA1O15239 70 aa15.13■□□□□ 0.01
CPNE1-223ENST00000475146 RPL18AQ02543 176 aaKnown RBP15.13■□□□□ 0.01
CPNE1-223ENST00000475146 FA2HQ7L5A8 372 aa15.13■□□□□ 0.01
CPNE1-223ENST00000475146 SCGB3A1Q96QR1 104 aa15.13■□□□□ 0.01
CPNE1-223ENST00000475146 MYCBP2O75592 4640 aa15.12■□□□□ 0.01
CPNE1-223ENST00000475146 DMBT1Q9UGM3 2413 aaPredicted RBP15.12■□□□□ 0.01
CPNE1-223ENST00000475146 SMCO4Q9NRQ5 59 aa15.12■□□□□ 0.01
CPNE1-223ENST00000475146 MRPL35Q9NZE8 188 aaKnown RBP15.12■□□□□ 0.01
CPNE1-223ENST00000475146 TRAPPC1Q9Y5R8 145 aa15.12■□□□□ 0.01
CPNE1-223ENST00000475146 HNRNPA3P51991 378 aaKnown RBP15.11■□□□□ 0.01
CPNE1-223ENST00000475146 RNF151Q2KHN1 245 aa15.11■□□□□ 0.01
CPNE1-223ENST00000475146 LINC01546A6NGU7 62 aa15.1■□□□□ 0.01
CPNE1-223ENST00000475146 ERASQ7Z444 233 aa15.1■□□□□ 0.01
CPNE1-223ENST00000475146 KRTAP29-1A8MX34 341 aaPredicted RBP15.09■□□□□ 0.01
CPNE1-223ENST00000475146 C10orf25Q5T742 122 aa15.09■□□□□ 0.01
CPNE1-223ENST00000475146 UNQ6190/PRO20217Q6UXQ8 127 aa15.09■□□□□ 0.01
CPNE1-223ENST00000475146 SEC11AP67812 179 aa15.08■□□□□ 0
CPNE1-223ENST00000475146 LINC01561Q8N1V8 128 aa15.08■□□□□ 0
CPNE1-223ENST00000475146 LINC01549A6NIU2 74 aa15.07■□□□□ 0
CPNE1-223ENST00000475146 KIAA0087Q14695 138 aa15.07■□□□□ 0
CPNE1-223ENST00000475146 FAM19A3Q7Z5A8 133 aa15.07■□□□□ 0
CPNE1-223ENST00000475146 GEMIN7Q9H840 131 aaKnown RBP15.07■□□□□ 0
CPNE1-223ENST00000475146 HERVK_113P63121 156 aa15.06■□□□□ 0
CPNE1-223ENST00000475146 C6orf48Q9UBA6 75 aa15.06■□□□□ 0
CPNE1-223ENST00000475146 PRSS2P07478 247 aa15.04■□□□□ -0
CPNE1-223ENST00000475146 C2orf82Q6UX34 121 aa15.04■□□□□ -0
CPNE1-223ENST00000475146 PACRGQ96M98 296 aaPredicted RBP15.04■□□□□ -0
CPNE1-223ENST00000475146 TOMM7Q9P0U1 55 aa15.04■□□□□ -0
CPNE1-223ENST00000475146 C18orf32Q8TCD1 76 aa15.03■□□□□ -0
CPNE1-223ENST00000475146 CDKN2A-AS1Q9UH64 79 aa15.03■□□□□ -0
CPNE1-223ENST00000475146 A0A1W2PNN7 141 aa15.02■□□□□ -0
CPNE1-223ENST00000475146 PRR3P79522 188 aaKnown RBP15.02■□□□□ -0
CPNE1-223ENST00000475146 C9orf116Q5BN46 136 aaPredicted RBP15.02■□□□□ -0
CPNE1-223ENST00000475146 OXTP01178 125 aa15.01□□□□□ -0.01
CPNE1-223ENST00000475146 LINC00469Q8N7U9 141 aa15.01□□□□□ -0.01
CPNE1-223ENST00000475146 TRBV30A0A0K0K1B3 111 aa15□□□□□ -0.01
CPNE1-223ENST00000475146 TLX1NBP0CAT3 122 aa15□□□□□ -0.01
CPNE1-223ENST00000475146 CKS1BP61024 79 aa14.99□□□□□ -0.01
CPNE1-223ENST00000475146 GAGE2EQ4V326 116 aa14.99□□□□□ -0.01
CPNE1-223ENST00000475146 Q6ZRP5 223 aa14.99□□□□□ -0.01
CPNE1-223ENST00000475146 CST9LQ9H4G1 147 aa14.99□□□□□ -0.01
CPNE1-223ENST00000475146 GAGE2DQ9UEU5 116 aa14.99□□□□□ -0.01
CPNE1-223ENST00000475146 LINC00614P0C842 121 aa14.98□□□□□ -0.01
CPNE1-223ENST00000475146 PMVKQ15126 192 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms