RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 CHTF8P0CG12 524 aa9.91□□□□□ -0.82
SRRT-209ENST00000474896 RAB5BP61020 215 aa9.91□□□□□ -0.82
SRRT-209ENST00000474896 SMAGPQ0VAQ4 97 aa9.91□□□□□ -0.82
SRRT-209ENST00000474896 TMEM101Q96IK0 257 aa9.91□□□□□ -0.82
SRRT-209ENST00000474896 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.9□□□□□ -0.82
SRRT-209ENST00000474896 LINC00614P0C842 121 aa9.9□□□□□ -0.82
SRRT-209ENST00000474896 C2orf66Q6UXQ4 117 aa9.9□□□□□ -0.82
SRRT-209ENST00000474896 OR5A1Q8NGJ0 315 aa9.9□□□□□ -0.82
SRRT-209ENST00000474896 TIMM21Q9BVV7 248 aa9.9□□□□□ -0.82
SRRT-209ENST00000474896 CYSLTR1Q9Y271 337 aa9.9□□□□□ -0.82
SRRT-209ENST00000474896 BAGE3Q86Y29 109 aa9.89□□□□□ -0.83
SRRT-209ENST00000474896 SPACA4Q8TDM5 124 aa9.89□□□□□ -0.83
SRRT-209ENST00000474896 SPANXA1Q9NS26 97 aa9.89□□□□□ -0.83
SRRT-209ENST00000474896 CSDC2Q9Y534 153 aaKnown RBP9.89□□□□□ -0.83
SRRT-209ENST00000474896 HIST1H2BKO60814 126 aa9.88□□□□□ -0.83
SRRT-209ENST00000474896 HIST1H2BJP06899 126 aa9.88□□□□□ -0.83
SRRT-209ENST00000474896 HIST1H2BOP23527 126 aa9.88□□□□□ -0.83
SRRT-209ENST00000474896 G0S2P27469 103 aa9.88□□□□□ -0.83
SRRT-209ENST00000474896 HIST1H2BBP33778 126 aa9.88□□□□□ -0.83
SRRT-209ENST00000474896 HIST1H2BDP58876 126 aa9.88□□□□□ -0.83
SRRT-209ENST00000474896 HIST1H2BCP62807 126 aa9.88□□□□□ -0.83
SRRT-209ENST00000474896 HIST2H2BEQ16778 126 aa9.88□□□□□ -0.83
SRRT-209ENST00000474896 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.88□□□□□ -0.83
SRRT-209ENST00000474896 HIST1H2BHQ93079 126 aa9.88□□□□□ -0.83
SRRT-209ENST00000474896 HIST1H2BNQ99877 126 aa9.88□□□□□ -0.83
SRRT-209ENST00000474896 HIST1H2BMQ99879 126 aa9.88□□□□□ -0.83
SRRT-209ENST00000474896 Q6ZUT4 128 aa9.87□□□□□ -0.83
SRRT-209ENST00000474896 TOMM6Q96B49 74 aa9.87□□□□□ -0.83
SRRT-209ENST00000474896 CHCHD1Q96BP2 118 aaKnown RBP9.87□□□□□ -0.83
SRRT-209ENST00000474896 CDC42SE2Q9NRR3 84 aa9.87□□□□□ -0.83
SRRT-209ENST00000474896 PLAC8Q9NZF1 115 aa9.87□□□□□ -0.83
SRRT-209ENST00000474896 PYGO1Q9Y3Y4 419 aa9.87□□□□□ -0.83
SRRT-209ENST00000474896 ZNF664Q8N3J9 261 aa9.86□□□□□ -0.83
SRRT-209ENST00000474896 C7orf33Q8WU49 177 aa9.86□□□□□ -0.83
SRRT-209ENST00000474896 A0A096LNJ9 63 aa9.85□□□□□ -0.83
SRRT-209ENST00000474896 C1orf196B1AJZ1 125 aa9.85□□□□□ -0.83
SRRT-209ENST00000474896 SERF1AO75920 110 aa9.85□□□□□ -0.83
SRRT-209ENST00000474896 MRPS36P82909 103 aaKnown RBP9.85□□□□□ -0.83
SRRT-209ENST00000474896 COX6A2Q02221 97 aa9.85□□□□□ -0.83
SRRT-209ENST00000474896 PMCHL1Q16048 86 aa9.85□□□□□ -0.83
SRRT-209ENST00000474896 RNASE13Q5GAN3 156 aaKnown RBP9.85□□□□□ -0.83
SRRT-209ENST00000474896 FAM104AQ969W3 186 aa9.85□□□□□ -0.83
SRRT-209ENST00000474896 OPRPNQ99935 248 aaPredicted RBP9.85□□□□□ -0.83
SRRT-209ENST00000474896 IGLV4-3A0A075B6K6 122 aa9.84□□□□□ -0.83
SRRT-209ENST00000474896 IGKV3OR2-268A0A0C4DH90 116 aa9.84□□□□□ -0.83
SRRT-209ENST00000474896 LINC01549A6NIU2 74 aa9.84□□□□□ -0.83
SRRT-209ENST00000474896 HSBP1O75506 76 aa9.84□□□□□ -0.83
SRRT-209ENST00000474896 HBDP02042 147 aa9.84□□□□□ -0.83
SRRT-209ENST00000474896 LINC00310P59036 64 aa9.84□□□□□ -0.83
SRRT-209ENST00000474896 CFAP161Q6P656 301 aa9.84□□□□□ -0.83
SRRT-209ENST00000474896 GAGE12HA6NDE8 117 aa9.83□□□□□ -0.84
SRRT-209ENST00000474896 IGIPA6NJ69 53 aa9.83□□□□□ -0.84
SRRT-209ENST00000474896 MAJINQ3KP22 176 aa9.83□□□□□ -0.84
SRRT-209ENST00000474896 C15orf56Q8N910 161 aa9.83□□□□□ -0.84
SRRT-209ENST00000474896 SCGB3A1Q96QR1 104 aa9.83□□□□□ -0.84
SRRT-209ENST00000474896 TIMM17AQ99595 171 aa9.83□□□□□ -0.84
SRRT-209ENST00000474896 NPSP0C0P6 89 aa9.82□□□□□ -0.84
SRRT-209ENST00000474896 ERASQ7Z444 233 aa9.82□□□□□ -0.84
SRRT-209ENST00000474896 TMEM141Q96I45 108 aa9.82□□□□□ -0.84
SRRT-209ENST00000474896 LINC01600Q96MT4 127 aa9.82□□□□□ -0.84
SRRT-209ENST00000474896 IGKV2-24A0A0C4DH68 120 aa9.81□□□□□ -0.84
SRRT-209ENST00000474896 NUPR1O60356 82 aa9.81□□□□□ -0.84
SRRT-209ENST00000474896 ODF1Q14990 250 aa9.81□□□□□ -0.84
SRRT-209ENST00000474896 HIGD2BQ4VC39 106 aa9.81□□□□□ -0.84
SRRT-209ENST00000474896 Q6ZN92 141 aa9.81□□□□□ -0.84
SRRT-209ENST00000474896 LINC00959A0A1B0GUT2 108 aa9.8□□□□□ -0.84
SRRT-209ENST00000474896 PDZD11Q5EBL8 140 aa9.8□□□□□ -0.84
SRRT-209ENST00000474896 FAM19A2Q8N3H0 131 aa9.8□□□□□ -0.84
SRRT-209ENST00000474896 STPG4Q8N801 248 aa9.8□□□□□ -0.84
SRRT-209ENST00000474896 TRAV13-1A0A0B4J241 112 aa9.79□□□□□ -0.84
SRRT-209ENST00000474896 IFITM10A6NMD0 228 aa9.79□□□□□ -0.84
SRRT-209ENST00000474896 PRR3P79522 188 aaKnown RBP9.79□□□□□ -0.84
SRRT-209ENST00000474896 SS18Q15532 418 aa9.79□□□□□ -0.84
SRRT-209ENST00000474896 PAPPA-AS1Q5QFB9 102 aa9.79□□□□□ -0.84
SRRT-209ENST00000474896 TEX43Q6ZNM6 134 aa9.79□□□□□ -0.84
SRRT-209ENST00000474896 LINC00173Q6ZV60 143 aa9.79□□□□□ -0.84
SRRT-209ENST00000474896 AMELXQ99217 191 aa9.79□□□□□ -0.84
SRRT-209ENST00000474896 TNXBP22105 4242 aa9.79□□□□□ -0.84
SRRT-209ENST00000474896 LRP2P98164 4655 aa9.79□□□□□ -0.84
SRRT-209ENST00000474896 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.78□□□□□ -0.84
SRRT-209ENST00000474896 NDUFA6P56556 154 aa9.78□□□□□ -0.84
SRRT-209ENST00000474896 ZC2HC1BQ5TFG8 222 aa9.78□□□□□ -0.84
SRRT-209ENST00000474896 CHCHD10Q8WYQ3 142 aaPredicted RBP9.78□□□□□ -0.84
SRRT-209ENST00000474896 C2orf88Q9BSF0 95 aa9.78□□□□□ -0.84
SRRT-209ENST00000474896 VCX2Q9H322 139 aa9.78□□□□□ -0.84
SRRT-209ENST00000474896 CCL25O15444 150 aa9.77□□□□□ -0.85
SRRT-209ENST00000474896 ATP5LO75964 103 aa9.77□□□□□ -0.85
SRRT-209ENST00000474896 XCL1P47992 114 aa9.77□□□□□ -0.85
SRRT-209ENST00000474896 COA6Q5JTJ3 125 aaKnown RBP9.77□□□□□ -0.85
SRRT-209ENST00000474896 A0A096LNI7 61 aa9.75□□□□□ -0.85
SRRT-209ENST00000474896 A0A0J9YXV3 536 aa9.75□□□□□ -0.85
SRRT-209ENST00000474896 UBE2D1P51668 147 aa9.75□□□□□ -0.85
SRRT-209ENST00000474896 KRTAP10-8P60410 259 aa9.75□□□□□ -0.85
SRRT-209ENST00000474896 GVQW2A0A096LPI5 108 aaPredicted RBP9.74□□□□□ -0.85
SRRT-209ENST00000474896 LEPROTL1O95214 131 aa9.74□□□□□ -0.85
SRRT-209ENST00000474896 FOXI1Q12951 378 aa9.74□□□□□ -0.85
SRRT-209ENST00000474896 PMVKQ15126 192 aa9.74□□□□□ -0.85
SRRT-209ENST00000474896 CD164L2Q6UWJ8 174 aa9.74□□□□□ -0.85
SRRT-209ENST00000474896 SPINK6Q6UWN8 80 aa9.74□□□□□ -0.85
SRRT-209ENST00000474896 LINC00242Q5T6M2 205 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms