RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 SPANXA1Q9NS26 97 aa9.83□□□□□ -0.84
VARS-223ENST00000474643 PYGO1Q9Y3Y4 419 aa9.83□□□□□ -0.84
VARS-223ENST00000474643 hDV102S1A0JD36 115 aa9.82□□□□□ -0.84
VARS-223ENST00000474643 RPL39P62891 51 aaKnown RBP9.82□□□□□ -0.84
VARS-223ENST00000474643 COA6Q5JTJ3 125 aaKnown RBP9.82□□□□□ -0.84
VARS-223ENST00000474643 KRTAP26-1Q6PEX3 210 aa9.82□□□□□ -0.84
VARS-223ENST00000474643 CYSLTR1Q9Y271 337 aa9.82□□□□□ -0.84
VARS-223ENST00000474643 UBE2D4Q9Y2X8 147 aa9.82□□□□□ -0.84
VARS-223ENST00000474643 LINC00959A0A1B0GUT2 108 aa9.81□□□□□ -0.84
VARS-223ENST00000474643 PRSS1P07477 247 aa9.81□□□□□ -0.84
VARS-223ENST00000474643 XCL1P47992 114 aa9.81□□□□□ -0.84
VARS-223ENST00000474643 RNASE13Q5GAN3 156 aaKnown RBP9.81□□□□□ -0.84
VARS-223ENST00000474643 TOMM6Q96B49 74 aa9.81□□□□□ -0.84
VARS-223ENST00000474643 DPH3Q96FX2 82 aa9.81□□□□□ -0.84
VARS-223ENST00000474643 URB1-AS1Q96HZ7 61 aa9.81□□□□□ -0.84
VARS-223ENST00000474643 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.8□□□□□ -0.84
VARS-223ENST00000474643 CCL25O15444 150 aa9.8□□□□□ -0.84
VARS-223ENST00000474643 MRPS36P82909 103 aaKnown RBP9.8□□□□□ -0.84
VARS-223ENST00000474643 CFAP161Q6P656 301 aa9.8□□□□□ -0.84
VARS-223ENST00000474643 C2orf66Q6UXQ4 117 aa9.8□□□□□ -0.84
VARS-223ENST00000474643 RPL37AP61513 92 aaKnown RBP9.79□□□□□ -0.84
VARS-223ENST00000474643 PAPPA-AS1Q5QFB9 102 aa9.79□□□□□ -0.84
VARS-223ENST00000474643 Q6ZUT4 128 aa9.79□□□□□ -0.84
VARS-223ENST00000474643 TRAV13-1A0A0B4J241 112 aa9.78□□□□□ -0.84
VARS-223ENST00000474643 HSBP1O75506 76 aa9.78□□□□□ -0.84
VARS-223ENST00000474643 HBDP02042 147 aa9.78□□□□□ -0.84
VARS-223ENST00000474643 ERASQ7Z444 233 aa9.78□□□□□ -0.84
VARS-223ENST00000474643 TMEM141Q96I45 108 aa9.78□□□□□ -0.84
VARS-223ENST00000474643 TIMM17AQ99595 171 aa9.78□□□□□ -0.84
VARS-223ENST00000474643 SERF1AO75920 110 aa9.77□□□□□ -0.85
VARS-223ENST00000474643 C9orf163Q8N9P6 203 aa9.77□□□□□ -0.85
VARS-223ENST00000474643 IGIPA6NJ69 53 aa9.76□□□□□ -0.85
VARS-223ENST00000474643 KRTAP29-1A8MX34 341 aaPredicted RBP9.76□□□□□ -0.85
VARS-223ENST00000474643 PACRGQ96M98 296 aaPredicted RBP9.76□□□□□ -0.85
VARS-223ENST00000474643 IGHV3-64A0A075B6Q5 118 aa9.75□□□□□ -0.85
VARS-223ENST00000474643 A0A096LNJ9 63 aa9.75□□□□□ -0.85
VARS-223ENST00000474643 IFITM10A6NMD0 228 aa9.75□□□□□ -0.85
VARS-223ENST00000474643 MALP21145 153 aa9.75□□□□□ -0.85
VARS-223ENST00000474643 LINC00310P59036 64 aa9.75□□□□□ -0.85
VARS-223ENST00000474643 FOXI1Q12951 378 aa9.75□□□□□ -0.85
VARS-223ENST00000474643 HIGD2BQ4VC39 106 aa9.75□□□□□ -0.85
VARS-223ENST00000474643 PDZD11Q5EBL8 140 aa9.75□□□□□ -0.85
VARS-223ENST00000474643 CD164L2Q6UWJ8 174 aa9.75□□□□□ -0.85
VARS-223ENST00000474643 OPRPNQ99935 248 aaPredicted RBP9.75□□□□□ -0.85
VARS-223ENST00000474643 ATP5LO75964 103 aa9.74□□□□□ -0.85
VARS-223ENST00000474643 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.73□□□□□ -0.85
VARS-223ENST00000474643 CNBPP62633 177 aaKnown RBP9.73□□□□□ -0.85
VARS-223ENST00000474643 Q6ZN92 141 aa9.73□□□□□ -0.85
VARS-223ENST00000474643 C15orf56Q8N910 161 aa9.73□□□□□ -0.85
VARS-223ENST00000474643 SCGB3A1Q96QR1 104 aa9.73□□□□□ -0.85
VARS-223ENST00000474643 IGLV4-3A0A075B6K6 122 aa9.72□□□□□ -0.85
VARS-223ENST00000474643 IGHV1-58A0A0C4DH39 117 aa9.72□□□□□ -0.85
VARS-223ENST00000474643 COX7A2LO14548 114 aa9.72□□□□□ -0.85
VARS-223ENST00000474643 FAM104AQ969W3 186 aa9.72□□□□□ -0.85
VARS-223ENST00000474643 OXTP01178 125 aa9.71□□□□□ -0.86
VARS-223ENST00000474643 NDUFA6P56556 154 aa9.71□□□□□ -0.86
VARS-223ENST00000474643 TEX43Q6ZNM6 134 aa9.71□□□□□ -0.86
VARS-223ENST00000474643 AMELXQ99217 191 aa9.71□□□□□ -0.86
VARS-223ENST00000474643 C2orf88Q9BSF0 95 aa9.71□□□□□ -0.86
VARS-223ENST00000474643 HSPB8Q9UJY1 196 aa9.71□□□□□ -0.86
VARS-223ENST00000474643 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.71□□□□□ -0.86
VARS-223ENST00000474643 ZNF561-AS1K7EIQ3 104 aa9.7□□□□□ -0.86
VARS-223ENST00000474643 SDIM1Q6ZPB5 146 aa9.7□□□□□ -0.86
VARS-223ENST00000474643 C5orf38Q86SI9 138 aa9.7□□□□□ -0.86
VARS-223ENST00000474643 VCX2Q9H322 139 aa9.7□□□□□ -0.86
VARS-223ENST00000474643 GVQW2A0A096LPI5 108 aaPredicted RBP9.69□□□□□ -0.86
VARS-223ENST00000474643 NUPR1O60356 82 aa9.69□□□□□ -0.86
VARS-223ENST00000474643 LEPROTL1O95214 131 aa9.69□□□□□ -0.86
VARS-223ENST00000474643 APOMO95445 188 aa9.69□□□□□ -0.86
VARS-223ENST00000474643 S100A6P06703 90 aa9.69□□□□□ -0.86
VARS-223ENST00000474643 FAM19A3Q7Z5A8 133 aa9.69□□□□□ -0.86
VARS-223ENST00000474643 SEC11AP67812 179 aa9.68□□□□□ -0.86
VARS-223ENST00000474643 PMCHL1Q16048 86 aa9.68□□□□□ -0.86
VARS-223ENST00000474643 SERTAD4-AS1Q5TG53 156 aa9.68□□□□□ -0.86
VARS-223ENST00000474643 FAM19A2Q8N3H0 131 aa9.68□□□□□ -0.86
VARS-223ENST00000474643 PMVKQ15126 192 aa9.67□□□□□ -0.86
VARS-223ENST00000474643 C7orf33Q8WU49 177 aa9.67□□□□□ -0.86
VARS-223ENST00000474643 IFI27L1Q96BM0 104 aa9.67□□□□□ -0.86
VARS-223ENST00000474643 LINC00526Q96FQ7 95 aa9.67□□□□□ -0.86
VARS-223ENST00000474643 TRAV12-1A0A0B4J245 112 aa9.66□□□□□ -0.86
VARS-223ENST00000474643 PANO1I0J062 215 aa9.66□□□□□ -0.86
VARS-223ENST00000474643 CHTF8P0CG12 524 aa9.66□□□□□ -0.86
VARS-223ENST00000474643 KRTAP10-4P60372 401 aaPredicted RBP9.66□□□□□ -0.86
VARS-223ENST00000474643 LINC00173Q6ZV60 143 aa9.66□□□□□ -0.86
VARS-223ENST00000474643 CST9LQ9H4G1 147 aa9.66□□□□□ -0.86
VARS-223ENST00000474643 PKIGQ9Y2B9 76 aa9.66□□□□□ -0.86
VARS-223ENST00000474643 IGKV2-24A0A0C4DH68 120 aa9.65□□□□□ -0.86
VARS-223ENST00000474643 SLPIP03973 132 aa9.65□□□□□ -0.86
VARS-223ENST00000474643 UBE2D1P51668 147 aa9.65□□□□□ -0.86
VARS-223ENST00000474643 ZC2HC1BQ5TFG8 222 aa9.65□□□□□ -0.86
VARS-223ENST00000474643 A0A087WYN8 130 aa9.64□□□□□ -0.87
VARS-223ENST00000474643 C5orf52A6NGY3 159 aa9.64□□□□□ -0.87
VARS-223ENST00000474643 COX6A2Q02221 97 aa9.64□□□□□ -0.87
VARS-223ENST00000474643 MAJINQ3KP22 176 aa9.64□□□□□ -0.87
VARS-223ENST00000474643 CARD19Q96LW7 228 aa9.64□□□□□ -0.87
VARS-223ENST00000474643 IGLV4-69A0A075B6H9 119 aa9.63□□□□□ -0.87
VARS-223ENST00000474643 SPAG11BQ08648 103 aa9.63□□□□□ -0.87
VARS-223ENST00000474643 SYCNQ0VAF6 134 aa9.63□□□□□ -0.87
VARS-223ENST00000474643 LINC00242Q5T6M2 205 aa9.63□□□□□ -0.87
VARS-223ENST00000474643 LINC01561Q8N1V8 128 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms