RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 PKIGQ9Y2B9 76 aa7.08□□□□□ -1.28
CKS1B-206ENST00000474215 A0A096LNI7 61 aa7.07□□□□□ -1.28
CKS1B-206ENST00000474215 APOMO95445 188 aa7.07□□□□□ -1.28
CKS1B-206ENST00000474215 ADCYAP1P18509 176 aa7.07□□□□□ -1.28
CKS1B-206ENST00000474215 IFI27P40305 119 aaPredicted RBP7.07□□□□□ -1.28
CKS1B-206ENST00000474215 Q8N8P6 123 aa7.07□□□□□ -1.28
CKS1B-206ENST00000474215 CTDSP1Q9GZU7 261 aa7.07□□□□□ -1.28
CKS1B-206ENST00000474215 LINC00474Q9P2X8 69 aa7.07□□□□□ -1.28
CKS1B-206ENST00000474215 PYGO1Q9Y3Y4 419 aa7.07□□□□□ -1.28
CKS1B-206ENST00000474215 IFITM10A6NMD0 228 aa7.06□□□□□ -1.28
CKS1B-206ENST00000474215 STPG4Q8N801 248 aa7.06□□□□□ -1.28
CKS1B-206ENST00000474215 IGHV3OR16-9A0A0B4J2B5 98 aa7.05□□□□□ -1.28
CKS1B-206ENST00000474215 OXTP01178 125 aa7.05□□□□□ -1.28
CKS1B-206ENST00000474215 HNRNPA3P51991 378 aaKnown RBP7.05□□□□□ -1.28
CKS1B-206ENST00000474215 Q6ZRU5 148 aa7.05□□□□□ -1.28
CKS1B-206ENST00000474215 OR10D4PQ8NGN7 298 aa7.05□□□□□ -1.28
CKS1B-206ENST00000474215 C7orf33Q8WU49 177 aa7.05□□□□□ -1.28
CKS1B-206ENST00000474215 C2orf48Q96LS8 159 aa7.05□□□□□ -1.28
CKS1B-206ENST00000474215 CAMK2N2Q96S95 79 aa7.05□□□□□ -1.28
CKS1B-206ENST00000474215 SEC11CQ9BY50 192 aa7.05□□□□□ -1.28
CKS1B-206ENST00000474215 IGLV4-3A0A075B6K6 122 aa7.04□□□□□ -1.28
CKS1B-206ENST00000474215 TRAV9-1A0A075B6T8 112 aa7.04□□□□□ -1.28
CKS1B-206ENST00000474215 LOC107984640A0A0U1RRK4 108 aa7.04□□□□□ -1.28
CKS1B-206ENST00000474215 K7EMI3 77 aa7.04□□□□□ -1.28
CKS1B-206ENST00000474215 CYSLTR1Q9Y271 337 aa7.04□□□□□ -1.28
CKS1B-206ENST00000474215 PTTG1IPP53801 180 aa7.03□□□□□ -1.28
CKS1B-206ENST00000474215 SPAG11BQ08648 103 aa7.03□□□□□ -1.28
CKS1B-206ENST00000474215 ORMDL2Q53FV1 153 aa7.03□□□□□ -1.28
CKS1B-206ENST00000474215 C2orf66Q6UXQ4 117 aa7.03□□□□□ -1.28
CKS1B-206ENST00000474215 COMMD7Q86VX2 200 aa7.03□□□□□ -1.28
CKS1B-206ENST00000474215 TMEM141Q96I45 108 aa7.03□□□□□ -1.28
CKS1B-206ENST00000474215 NXT2Q9NPJ8 142 aaKnown RBP7.03□□□□□ -1.28
CKS1B-206ENST00000474215 TGIF2-C20orf24A0A0A6YYL0 155 aa7.02□□□□□ -1.29
CKS1B-206ENST00000474215 F8WDY8 70 aa7.02□□□□□ -1.29
CKS1B-206ENST00000474215 S100PP25815 95 aa7.02□□□□□ -1.29
CKS1B-206ENST00000474215 RNF151Q2KHN1 245 aa7.02□□□□□ -1.29
CKS1B-206ENST00000474215 KIAA1644Q3SXP7 199 aa7.02□□□□□ -1.29
CKS1B-206ENST00000474215 LINC00242Q5T6M2 205 aa7.02□□□□□ -1.29
CKS1B-206ENST00000474215 TEX43Q6ZNM6 134 aa7.02□□□□□ -1.29
CKS1B-206ENST00000474215 ORAOV1Q8WV07 137 aa7.02□□□□□ -1.29
CKS1B-206ENST00000474215 A0A087WZ39 114 aa7.01□□□□□ -1.29
CKS1B-206ENST00000474215 IGIPA6NJ69 53 aa7.01□□□□□ -1.29
CKS1B-206ENST00000474215 NPSP0C0P6 89 aa7.01□□□□□ -1.29
CKS1B-206ENST00000474215 G0S2P27469 103 aa7.01□□□□□ -1.29
CKS1B-206ENST00000474215 GAGE2BQ13066 116 aa7.01□□□□□ -1.29
CKS1B-206ENST00000474215 C10orf91Q5T1B1 145 aa7.01□□□□□ -1.29
CKS1B-206ENST00000474215 Q6ZN92 141 aa7.01□□□□□ -1.29
CKS1B-206ENST00000474215 GNB1LQ9BYB4 327 aa7.01□□□□□ -1.29
CKS1B-206ENST00000474215 VCX2Q9H322 139 aa7.01□□□□□ -1.29
CKS1B-206ENST00000474215 A0A0J9YXV3 536 aa7□□□□□ -1.29
CKS1B-206ENST00000474215 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7□□□□□ -1.29
CKS1B-206ENST00000474215 UBE2D1P51668 147 aa7□□□□□ -1.29
CKS1B-206ENST00000474215 AMELXQ99217 191 aa7□□□□□ -1.29
CKS1B-206ENST00000474215 C2orf88Q9BSF0 95 aa7□□□□□ -1.29
CKS1B-206ENST00000474215 MRPL35Q9NZE8 188 aaKnown RBP7□□□□□ -1.29
CKS1B-206ENST00000474215 NDUFA1O15239 70 aa6.99□□□□□ -1.29
CKS1B-206ENST00000474215 ZC2HC1BQ5TFG8 222 aa6.99□□□□□ -1.29
CKS1B-206ENST00000474215 LINC00173Q6ZV60 143 aa6.99□□□□□ -1.29
CKS1B-206ENST00000474215 CARHSP1Q9Y2V2 147 aaKnown RBP6.99□□□□□ -1.29
CKS1B-206ENST00000474215 LRP1Q07954 4544 aaKnown RBP6.99□□□□□ -1.29
CKS1B-206ENST00000474215 PRR3P79522 188 aaKnown RBP6.98□□□□□ -1.29
CKS1B-206ENST00000474215 RPL18AQ02543 176 aaKnown RBP6.98□□□□□ -1.29
CKS1B-206ENST00000474215 KIAA0087Q14695 138 aa6.98□□□□□ -1.29
CKS1B-206ENST00000474215 RHEBQ15382 184 aa6.98□□□□□ -1.29
CKS1B-206ENST00000474215 COX19Q49B96 90 aa6.98□□□□□ -1.29
CKS1B-206ENST00000474215 PAPPA-AS1Q5QFB9 102 aa6.98□□□□□ -1.29
CKS1B-206ENST00000474215 C10orf25Q5T742 122 aa6.98□□□□□ -1.29
CKS1B-206ENST00000474215 UNQ6190/PRO20217Q6UXQ8 127 aa6.98□□□□□ -1.29
CKS1B-206ENST00000474215 TOMM6Q96B49 74 aa6.98□□□□□ -1.29
CKS1B-206ENST00000474215 ALKBH7Q9BT30 221 aaPredicted RBP6.98□□□□□ -1.29
CKS1B-206ENST00000474215 RPS10P5Q9NQ39 176 aa6.98□□□□□ -1.29
CKS1B-206ENST00000474215 A0A1W2PNN7 141 aa6.97□□□□□ -1.29
CKS1B-206ENST00000474215 LINC01561Q8N1V8 128 aa6.97□□□□□ -1.29
CKS1B-206ENST00000474215 TIMM17AQ99595 171 aa6.97□□□□□ -1.29
CKS1B-206ENST00000474215 MT-ND6P03923 174 aa6.96□□□□□ -1.3
CKS1B-206ENST00000474215 FABP9Q0Z7S8 132 aa6.96□□□□□ -1.3
CKS1B-206ENST00000474215 C9orf116Q5BN46 136 aaPredicted RBP6.96□□□□□ -1.3
CKS1B-206ENST00000474215 ERASQ7Z444 233 aa6.96□□□□□ -1.3
CKS1B-206ENST00000474215 FAM19A3Q7Z5A8 133 aa6.96□□□□□ -1.3
CKS1B-206ENST00000474215 SCGB3A1Q96QR1 104 aa6.96□□□□□ -1.3
CKS1B-206ENST00000474215 C6orf48Q9UBA6 75 aa6.96□□□□□ -1.3
CKS1B-206ENST00000474215 LINC01546A6NGU7 62 aa6.95□□□□□ -1.3
CKS1B-206ENST00000474215 LINC01549A6NIU2 74 aa6.95□□□□□ -1.3
CKS1B-206ENST00000474215 TLX1NBP0CAT3 122 aa6.95□□□□□ -1.3
CKS1B-206ENST00000474215 SEC11AP67812 179 aa6.95□□□□□ -1.3
CKS1B-206ENST00000474215 SERTAD4-AS1Q5TG53 156 aa6.95□□□□□ -1.3
CKS1B-206ENST00000474215 C2orf82Q6UX34 121 aa6.95□□□□□ -1.3
CKS1B-206ENST00000474215 Q6ZRP5 223 aa6.95□□□□□ -1.3
CKS1B-206ENST00000474215 MRPL18Q9H0U6 180 aaKnown RBP6.95□□□□□ -1.3
CKS1B-206ENST00000474215 HERVK_113P63121 156 aa6.94□□□□□ -1.3
CKS1B-206ENST00000474215 FAT3Q8TDW7 4589 aa6.94□□□□□ -1.3
CKS1B-206ENST00000474215 PKHD1L1Q86WI1 4243 aa6.93□□□□□ -1.3
CKS1B-206ENST00000474215 TRBV30A0A0K0K1B3 111 aa6.93□□□□□ -1.3
CKS1B-206ENST00000474215 APOC3P02656 99 aa6.93□□□□□ -1.3
CKS1B-206ENST00000474215 PRSS2P07478 247 aa6.93□□□□□ -1.3
CKS1B-206ENST00000474215 MT1HL1P0DM35 61 aa6.93□□□□□ -1.3
CKS1B-206ENST00000474215 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
CKS1B-206ENST00000474215 C6orf226Q5I0X4 101 aa6.93□□□□□ -1.3
CKS1B-206ENST00000474215 SPINK6Q6UWN8 80 aa6.93□□□□□ -1.3
CKS1B-206ENST00000474215 FA2HQ7L5A8 372 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms