RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 MAST4O15021 2626 aa0.16□□□□□ -2.38
GPCPD1-204ENST00000473797 TMEM262E9PQX1 116 aa0.16□□□□□ -2.38
GPCPD1-204ENST00000473797 TCEAL7Q9BRU2 100 aa0.16□□□□□ -2.38
GPCPD1-204ENST00000473797 PRO1933Q9H354 126 aa0.16□□□□□ -2.38
GPCPD1-204ENST00000473797 EHBP1L1Q8N3D4 1523 aa0.16□□□□□ -2.38
GPCPD1-204ENST00000473797 LAMC1P11047 1609 aa0.16□□□□□ -2.38
GPCPD1-204ENST00000473797 ZFYVE26Q68DK2 2539 aa0.16□□□□□ -2.38
GPCPD1-204ENST00000473797 SCN7AQ01118 1682 aa0.15□□□□□ -2.39
GPCPD1-204ENST00000473797 NCOA3Q9Y6Q9 1424 aa0.15□□□□□ -2.39
GPCPD1-204ENST00000473797 NCOR2Q9Y618 2525 aa0.15□□□□□ -2.39
GPCPD1-204ENST00000473797 HMGXB3Q12766 1538 aa0.15□□□□□ -2.39
GPCPD1-204ENST00000473797 UBE2D3P61077 147 aa0.15□□□□□ -2.39
GPCPD1-204ENST00000473797 UBE2D2P62837 147 aa0.15□□□□□ -2.39
GPCPD1-204ENST00000473797 Q5VSD8 79 aa0.15□□□□□ -2.39
GPCPD1-204ENST00000473797 C10orf113Q5VZT2 155 aa0.15□□□□□ -2.39
GPCPD1-204ENST00000473797 VAMP8Q9BV40 100 aa0.15□□□□□ -2.39
GPCPD1-204ENST00000473797 CHD1O14646 1710 aa0.15□□□□□ -2.39
GPCPD1-204ENST00000473797 NUP188Q5SRE5 1749 aa0.15□□□□□ -2.39
GPCPD1-204ENST00000473797 SPTBN2O15020 2390 aa0.14□□□□□ -2.39
GPCPD1-204ENST00000473797 TOPAZ1Q8N9V7 1692 aa0.14□□□□□ -2.39
GPCPD1-204ENST00000473797 FAT4Q6V0I7 4981 aa0.14□□□□□ -2.39
GPCPD1-204ENST00000473797 USF3Q68DE3 2245 aa0.14□□□□□ -2.39
GPCPD1-204ENST00000473797 FAM223BA6NKX1 122 aa0.14□□□□□ -2.39
GPCPD1-204ENST00000473797 I3L2K1 104 aa0.14□□□□□ -2.39
GPCPD1-204ENST00000473797 SPRR1AP35321 89 aa0.14□□□□□ -2.39
GPCPD1-204ENST00000473797 SEC11AP67812 179 aa0.14□□□□□ -2.39
GPCPD1-204ENST00000473797 SPRR4Q96PI1 79 aa0.14□□□□□ -2.39
GPCPD1-204ENST00000473797 AP4S1Q9Y587 144 aa0.14□□□□□ -2.39
GPCPD1-204ENST00000473797 DIP2CQ9Y2E4 1556 aa0.14□□□□□ -2.39
GPCPD1-204ENST00000473797 MACF1Q9UPN3 7388 aaKnown RBP0.13□□□□□ -2.39
GPCPD1-204ENST00000473797 PKDREJQ9NTG1 2253 aa0.13□□□□□ -2.39
GPCPD1-204ENST00000473797 OTOGQ6ZRI0 2925 aa0.13□□□□□ -2.39
GPCPD1-204ENST00000473797 TRBV7-4A0A0J9YYF1 115 aa0.13□□□□□ -2.39
GPCPD1-204ENST00000473797 hADV29S1A0JD25 119 aa0.13□□□□□ -2.39
GPCPD1-204ENST00000473797 TMEM218A2RU14 115 aa0.13□□□□□ -2.39
GPCPD1-204ENST00000473797 SAA2P0DJI9 122 aaPredicted RBP0.13□□□□□ -2.39
GPCPD1-204ENST00000473797 COX6B1P14854 86 aa0.13□□□□□ -2.39
GPCPD1-204ENST00000473797 CGREF1Q99674 301 aa0.13□□□□□ -2.39
GPCPD1-204ENST00000473797 C2CD3Q4AC94 2353 aa0.13□□□□□ -2.39
GPCPD1-204ENST00000473797 NSD3Q9BZ95 1437 aa0.13□□□□□ -2.39
GPCPD1-204ENST00000473797 MAGI1Q96QZ7 1491 aaPredicted RBP0.12□□□□□ -2.39
GPCPD1-204ENST00000473797 GNGT2O14610 69 aa0.12□□□□□ -2.39
GPCPD1-204ENST00000473797 LINC01600Q96MT4 127 aa0.12□□□□□ -2.39
GPCPD1-204ENST00000473797 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
GPCPD1-204ENST00000473797 PIEZO1Q92508 2521 aa0.11□□□□□ -2.39
GPCPD1-204ENST00000473797 SYS1-DBNDD2H3BUS1 97 aa0.11□□□□□ -2.39
GPCPD1-204ENST00000473797 NDUFC1O43677 76 aa0.11□□□□□ -2.39
GPCPD1-204ENST00000473797 S100A10P60903 97 aa0.11□□□□□ -2.39
GPCPD1-204ENST00000473797 FXYD6Q9H0Q3 95 aa0.11□□□□□ -2.39
GPCPD1-204ENST00000473797 PTPRQQ9UMZ3 2332 aa0.11□□□□□ -2.39
GPCPD1-204ENST00000473797 ZFYVE16Q7Z3T8 1539 aa0.11□□□□□ -2.39
GPCPD1-204ENST00000473797 ADGRL2O95490 1459 aa0.1□□□□□ -2.39
GPCPD1-204ENST00000473797 C1orf167Q5SNV9 1468 aa0.1□□□□□ -2.39
GPCPD1-204ENST00000473797 WNK2Q9Y3S1 2297 aa0.1□□□□□ -2.39
GPCPD1-204ENST00000473797 A0A0G2JND7 137 aa0.1□□□□□ -2.39
GPCPD1-204ENST00000473797 ATP6V1G2-DDX39BF2Z307 99 aa0.1□□□□□ -2.39
GPCPD1-204ENST00000473797 HRNRQ86YZ3 2850 aaPredicted RBP0.1□□□□□ -2.39
GPCPD1-204ENST00000473797 GOLGA4Q13439 2230 aaKnown RBP0.1□□□□□ -2.39
GPCPD1-204ENST00000473797 SETBP1Q9Y6X0 1596 aa0.1□□□□□ -2.39
GPCPD1-204ENST00000473797 A0A0G2JMZ2 1700 aa0.1□□□□□ -2.39
GPCPD1-204ENST00000473797 GAPVD1Q14C86 1478 aa0.1□□□□□ -2.39
GPCPD1-204ENST00000473797 TRAV30A0A087WSZ9 112 aa0.09□□□□□ -2.4
GPCPD1-204ENST00000473797 RBP2P50120 134 aa0.09□□□□□ -2.4
GPCPD1-204ENST00000473797 PMCHL1Q16048 86 aa0.09□□□□□ -2.4
GPCPD1-204ENST00000473797 C14orf144Q96I85 54 aa0.09□□□□□ -2.4
GPCPD1-204ENST00000473797 USMG5Q96IX5 58 aa0.09□□□□□ -2.4
GPCPD1-204ENST00000473797 PMCHL2Q9BQD1 86 aa0.09□□□□□ -2.4
GPCPD1-204ENST00000473797 CACFD1Q9UGQ2 172 aa0.09□□□□□ -2.4
GPCPD1-204ENST00000473797 ABCC5O15440 1437 aa0.09□□□□□ -2.4
GPCPD1-204ENST00000473797 XRN1Q8IZH2 1706 aaKnown RBP0.09□□□□□ -2.4
GPCPD1-204ENST00000473797 AKAP6Q13023 2319 aa0.09□□□□□ -2.4
GPCPD1-204ENST00000473797 MRC2Q9UBG0 1479 aa0.09□□□□□ -2.4
GPCPD1-204ENST00000473797 ANKRD36A6QL64 1941 aa0.09□□□□□ -2.4
GPCPD1-204ENST00000473797 A0A087WVE0 104 aa0.08□□□□□ -2.4
GPCPD1-204ENST00000473797 LINC00959A0A1B0GUT2 108 aa0.08□□□□□ -2.4
GPCPD1-204ENST00000473797 C7orf77A4D0Y5 90 aa0.08□□□□□ -2.4
GPCPD1-204ENST00000473797 UQCRHP07919 91 aa0.08□□□□□ -2.4
GPCPD1-204ENST00000473797 LINC00032P0C843 101 aa0.08□□□□□ -2.4
GPCPD1-204ENST00000473797 COX8AP10176 69 aa0.08□□□□□ -2.4
GPCPD1-204ENST00000473797 SPRR1BP22528 89 aa0.08□□□□□ -2.4
GPCPD1-204ENST00000473797 PSMG4Q5JS54 123 aa0.08□□□□□ -2.4
GPCPD1-204ENST00000473797 DEFB123Q8N688 67 aa0.08□□□□□ -2.4
GPCPD1-204ENST00000473797 LCN9Q8WX39 176 aa0.08□□□□□ -2.4
GPCPD1-204ENST00000473797 LINC00846Q9NV44 126 aa0.08□□□□□ -2.4
GPCPD1-204ENST00000473797 IGSF10Q6WRI0 2623 aa0.08□□□□□ -2.4
GPCPD1-204ENST00000473797 SSPOA2VEC9 5147 aa0.08□□□□□ -2.4
GPCPD1-204ENST00000473797 UNC79Q9P2D8 2635 aa0.07□□□□□ -2.4
GPCPD1-204ENST00000473797 H3BQF6 201 aa0.07□□□□□ -2.4
GPCPD1-204ENST00000473797 K7EQZ3 153 aa0.07□□□□□ -2.4
GPCPD1-204ENST00000473797 SPINK4O60575 86 aa0.07□□□□□ -2.4
GPCPD1-204ENST00000473797 NLRP1Q9C000 1473 aa0.07□□□□□ -2.4
GPCPD1-204ENST00000473797 TULP4Q9NRJ4 1543 aa0.07□□□□□ -2.4
GPCPD1-204ENST00000473797 KNDC1Q76NI1 1749 aa0.07□□□□□ -2.4
GPCPD1-204ENST00000473797 DMBT1Q9UGM3 2413 aaPredicted RBP0.06□□□□□ -2.4
GPCPD1-204ENST00000473797 CNTLNQ9NXG0 1405 aa0.06□□□□□ -2.4
GPCPD1-204ENST00000473797 ZNF292O60281 2723 aa0.06□□□□□ -2.4
GPCPD1-204ENST00000473797 CCDC141Q6ZP82 1450 aa0.06□□□□□ -2.4
GPCPD1-204ENST00000473797 MLH3Q9UHC1 1453 aa0.06□□□□□ -2.4
GPCPD1-204ENST00000473797 A0A1B0GU69 56 aa0.06□□□□□ -2.4
GPCPD1-204ENST00000473797 LOC730098B7Z3J9 87 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms