RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 CDC42SE2Q9NRR3 84 aa6.02□□□□□ -1.45
SMC4-213ENST00000472282 SPANXA1Q9NS26 97 aa6.02□□□□□ -1.45
SMC4-213ENST00000472282 CYSLTR1Q9Y271 337 aa6.02□□□□□ -1.45
SMC4-213ENST00000472282 CSDC2Q9Y534 153 aaKnown RBP6.02□□□□□ -1.45
SMC4-213ENST00000472282 TRAV8-4A0A0B4J246 113 aa6.01□□□□□ -1.45
SMC4-213ENST00000472282 EPM2AB3EWF7 344 aa6.01□□□□□ -1.45
SMC4-213ENST00000472282 LECT2O14960 151 aa6.01□□□□□ -1.45
SMC4-213ENST00000472282 TRGC2P03986 189 aa6.01□□□□□ -1.45
SMC4-213ENST00000472282 S100A1P23297 94 aa6.01□□□□□ -1.45
SMC4-213ENST00000472282 KRTAP26-1Q6PEX3 210 aa6.01□□□□□ -1.45
SMC4-213ENST00000472282 BAALCQ8WXS3 180 aa6.01□□□□□ -1.45
SMC4-213ENST00000472282 OPRPNQ99935 248 aaPredicted RBP6.01□□□□□ -1.45
SMC4-213ENST00000472282 LINC01546A6NGU7 62 aa6□□□□□ -1.45
SMC4-213ENST00000472282 SMR3BP02814 79 aaPredicted RBP6□□□□□ -1.45
SMC4-213ENST00000472282 GCSHP23434 173 aa6□□□□□ -1.45
SMC4-213ENST00000472282 FAM104AQ969W3 186 aa6□□□□□ -1.45
SMC4-213ENST00000472282 URB1-AS1Q96HZ7 61 aa6□□□□□ -1.45
SMC4-213ENST00000472282 IGLV4-3A0A075B6K6 122 aa5.99□□□□□ -1.45
SMC4-213ENST00000472282 IGLV5-52A0A0A0MRZ9 124 aa5.99□□□□□ -1.45
SMC4-213ENST00000472282 LINC00959A0A1B0GUT2 108 aa5.99□□□□□ -1.45
SMC4-213ENST00000472282 GAGE12HA6NDE8 117 aa5.99□□□□□ -1.45
SMC4-213ENST00000472282 CCL25O15444 150 aa5.99□□□□□ -1.45
SMC4-213ENST00000472282 MRPS36P82909 103 aaKnown RBP5.99□□□□□ -1.45
SMC4-213ENST00000472282 Q5VSD8 79 aa5.99□□□□□ -1.45
SMC4-213ENST00000472282 Q8N814 137 aa5.99□□□□□ -1.45
SMC4-213ENST00000472282 CHCHD10Q8WYQ3 142 aaPredicted RBP5.99□□□□□ -1.45
SMC4-213ENST00000472282 FAM30AQ9NZY2 134 aa5.99□□□□□ -1.45
SMC4-213ENST00000472282 PYGO1Q9Y3Y4 419 aa5.99□□□□□ -1.45
SMC4-213ENST00000472282 TRAV13-1A0A0B4J241 112 aa5.98□□□□□ -1.45
SMC4-213ENST00000472282 IFITM10A6NMD0 228 aa5.98□□□□□ -1.45
SMC4-213ENST00000472282 USP17L23D6RBM5 183 aa5.98□□□□□ -1.45
SMC4-213ENST00000472282 LINC00614P0C842 121 aa5.98□□□□□ -1.45
SMC4-213ENST00000472282 G0S2P27469 103 aa5.98□□□□□ -1.45
SMC4-213ENST00000472282 XCL1P47992 114 aa5.98□□□□□ -1.45
SMC4-213ENST00000472282 SS18Q15532 418 aa5.98□□□□□ -1.45
SMC4-213ENST00000472282 TOMM6Q96B49 74 aa5.98□□□□□ -1.45
SMC4-213ENST00000472282 TMEM141Q96I45 108 aa5.98□□□□□ -1.45
SMC4-213ENST00000472282 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.97□□□□□ -1.45
SMC4-213ENST00000472282 A0A096LNJ9 63 aa5.97□□□□□ -1.45
SMC4-213ENST00000472282 IGIPA6NJ69 53 aa5.97□□□□□ -1.45
SMC4-213ENST00000472282 INAFM2P0DMQ5 153 aa5.97□□□□□ -1.45
SMC4-213ENST00000472282 RAB5BP61020 215 aa5.97□□□□□ -1.45
SMC4-213ENST00000472282 FOXI1Q12951 378 aa5.97□□□□□ -1.45
SMC4-213ENST00000472282 PMCHL1Q16048 86 aa5.97□□□□□ -1.45
SMC4-213ENST00000472282 ZC2HC1BQ5TFG8 222 aa5.97□□□□□ -1.45
SMC4-213ENST00000472282 Q6ZN92 141 aa5.97□□□□□ -1.45
SMC4-213ENST00000472282 LINC00173Q6ZV60 143 aa5.97□□□□□ -1.45
SMC4-213ENST00000472282 TIMM17AQ99595 171 aa5.97□□□□□ -1.45
SMC4-213ENST00000472282 C1orf196B1AJZ1 125 aa5.96□□□□□ -1.46
SMC4-213ENST00000472282 HBDP02042 147 aa5.96□□□□□ -1.46
SMC4-213ENST00000472282 TEX43Q6ZNM6 134 aa5.96□□□□□ -1.46
SMC4-213ENST00000472282 BAGE3Q86Y29 109 aa5.96□□□□□ -1.46
SMC4-213ENST00000472282 NTN5Q8WTR8 489 aaPredicted RBP5.96□□□□□ -1.46
SMC4-213ENST00000472282 SCGB3A1Q96QR1 104 aa5.96□□□□□ -1.46
SMC4-213ENST00000472282 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
SMC4-213ENST00000472282 LINC01549A6NIU2 74 aa5.95□□□□□ -1.46
SMC4-213ENST00000472282 NPSP0C0P6 89 aa5.95□□□□□ -1.46
SMC4-213ENST00000472282 LINC01620Q4KN68 170 aa5.95□□□□□ -1.46
SMC4-213ENST00000472282 C14orf177Q52M58 125 aa5.95□□□□□ -1.46
SMC4-213ENST00000472282 CD164L2Q6UWJ8 174 aa5.95□□□□□ -1.46
SMC4-213ENST00000472282 ERASQ7Z444 233 aa5.95□□□□□ -1.46
SMC4-213ENST00000472282 C15orf56Q8N910 161 aa5.95□□□□□ -1.46
SMC4-213ENST00000472282 CHCHD1Q96BP2 118 aaKnown RBP5.95□□□□□ -1.46
SMC4-213ENST00000472282 AMELXQ99217 191 aa5.95□□□□□ -1.46
SMC4-213ENST00000472282 PRSS1P07477 247 aa5.94□□□□□ -1.46
SMC4-213ENST00000472282 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
SMC4-213ENST00000472282 PAPPA-AS1Q5QFB9 102 aa5.94□□□□□ -1.46
SMC4-213ENST00000472282 C2orf88Q9BSF0 95 aa5.94□□□□□ -1.46
SMC4-213ENST00000472282 VCX2Q9H322 139 aa5.94□□□□□ -1.46
SMC4-213ENST00000472282 hDV102S1A0JD36 115 aa5.93□□□□□ -1.46
SMC4-213ENST00000472282 COX7A2LO14548 114 aa5.93□□□□□ -1.46
SMC4-213ENST00000472282 HSBP1O75506 76 aa5.93□□□□□ -1.46
SMC4-213ENST00000472282 SERF1AO75920 110 aa5.93□□□□□ -1.46
SMC4-213ENST00000472282 UBE2D1P51668 147 aa5.93□□□□□ -1.46
SMC4-213ENST00000472282 HIGD2BQ4VC39 106 aa5.93□□□□□ -1.46
SMC4-213ENST00000472282 PDZD11Q5EBL8 140 aa5.93□□□□□ -1.46
SMC4-213ENST00000472282 C5orf38Q86SI9 138 aa5.93□□□□□ -1.46
SMC4-213ENST00000472282 VPS13BQ7Z7G8 4022 aa5.93□□□□□ -1.46
SMC4-213ENST00000472282 MYCBP2O75592 4640 aa5.92□□□□□ -1.46
SMC4-213ENST00000472282 IGHV1-58A0A0C4DH39 117 aa5.92□□□□□ -1.46
SMC4-213ENST00000472282 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.92□□□□□ -1.46
SMC4-213ENST00000472282 HIST1H2BKO60814 126 aa5.92□□□□□ -1.46
SMC4-213ENST00000472282 HIST1H2BJP06899 126 aa5.92□□□□□ -1.46
SMC4-213ENST00000472282 MALP21145 153 aa5.92□□□□□ -1.46
SMC4-213ENST00000472282 HIST1H2BOP23527 126 aa5.92□□□□□ -1.46
SMC4-213ENST00000472282 HIST1H2BBP33778 126 aa5.92□□□□□ -1.46
SMC4-213ENST00000472282 HIST1H2BDP58876 126 aa5.92□□□□□ -1.46
SMC4-213ENST00000472282 HIST1H2BCP62807 126 aa5.92□□□□□ -1.46
SMC4-213ENST00000472282 HIST2H2BEQ16778 126 aa5.92□□□□□ -1.46
SMC4-213ENST00000472282 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.92□□□□□ -1.46
SMC4-213ENST00000472282 LINC00242Q5T6M2 205 aa5.92□□□□□ -1.46
SMC4-213ENST00000472282 CFAP161Q6P656 301 aa5.92□□□□□ -1.46
SMC4-213ENST00000472282 Q6ZSA8 131 aa5.92□□□□□ -1.46
SMC4-213ENST00000472282 FAM19A2Q8N3H0 131 aa5.92□□□□□ -1.46
SMC4-213ENST00000472282 HIST1H2BHQ93079 126 aa5.92□□□□□ -1.46
SMC4-213ENST00000472282 HIST1H2BNQ99877 126 aa5.92□□□□□ -1.46
SMC4-213ENST00000472282 HIST1H2BMQ99879 126 aa5.92□□□□□ -1.46
SMC4-213ENST00000472282 FLG2Q5D862 2391 aaPredicted RBP5.91□□□□□ -1.46
SMC4-213ENST00000472282 GVQW2A0A096LPI5 108 aaPredicted RBP5.91□□□□□ -1.46
SMC4-213ENST00000472282 IGHV3OR16-9A0A0B4J2B5 98 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms