RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 KRTDAPP60985 99 aa11.22□□□□□ -0.61
CCM2-205ENST00000472223 C14orf177Q52M58 125 aa11.22□□□□□ -0.61
CCM2-205ENST00000472223 FAM19A3Q7Z5A8 133 aa11.22□□□□□ -0.61
CCM2-205ENST00000472223 C20orf202A1L168 122 aa11.21□□□□□ -0.61
CCM2-205ENST00000472223 F8VRH5 84 aa11.21□□□□□ -0.61
CCM2-205ENST00000472223 SYS1-DBNDD2H3BUS1 97 aa11.21□□□□□ -0.61
CCM2-205ENST00000472223 FOXI1Q12951 378 aa11.21□□□□□ -0.61
CCM2-205ENST00000472223 Q6ZRN7 208 aaPredicted RBP11.21□□□□□ -0.61
CCM2-205ENST00000472223 LINC00469Q8N7U9 141 aa11.21□□□□□ -0.61
CCM2-205ENST00000472223 HIST1H2BLQ99880 126 aa11.21□□□□□ -0.61
CCM2-205ENST00000472223 IGLC3P0DOY3 106 aa11.2□□□□□ -0.62
CCM2-205ENST00000472223 AKR1D1P51857 326 aa11.2□□□□□ -0.62
CCM2-205ENST00000472223 PET117Q6UWS5 81 aa11.2□□□□□ -0.62
CCM2-205ENST00000472223 C5orf38Q86SI9 138 aa11.2□□□□□ -0.62
CCM2-205ENST00000472223 CHAC1Q9BUX1 264 aa11.2□□□□□ -0.62
CCM2-205ENST00000472223 IGHV3OR16-9A0A0B4J2B5 98 aa11.19□□□□□ -0.62
CCM2-205ENST00000472223 IGHV1-58A0A0C4DH39 117 aa11.19□□□□□ -0.62
CCM2-205ENST00000472223 RTL8CO15255 209 aa11.19□□□□□ -0.62
CCM2-205ENST00000472223 PLNP26678 52 aa11.19□□□□□ -0.62
CCM2-205ENST00000472223 KRTAP26-1Q6PEX3 210 aa11.19□□□□□ -0.62
CCM2-205ENST00000472223 SPATA12Q7Z6I5 190 aa11.19□□□□□ -0.62
CCM2-205ENST00000472223 MRPL35Q9NZE8 188 aaKnown RBP11.19□□□□□ -0.62
CCM2-205ENST00000472223 HYDINQ4G0P3 5121 aa11.19□□□□□ -0.62
CCM2-205ENST00000472223 C3orf79P0CE67 100 aa11.18□□□□□ -0.62
CCM2-205ENST00000472223 COX6A2Q02221 97 aa11.18□□□□□ -0.62
CCM2-205ENST00000472223 TMEM170BQ5T4T1 132 aa11.18□□□□□ -0.62
CCM2-205ENST00000472223 A0A087WZ39 114 aa11.17□□□□□ -0.62
CCM2-205ENST00000472223 USP17L23D6RBM5 183 aa11.17□□□□□ -0.62
CCM2-205ENST00000472223 DPM2O94777 84 aa11.17□□□□□ -0.62
CCM2-205ENST00000472223 ODF1Q14990 250 aa11.17□□□□□ -0.62
CCM2-205ENST00000472223 LINC01561Q8N1V8 128 aa11.17□□□□□ -0.62
CCM2-205ENST00000472223 KMT2CQ8NEZ4 4911 aaKnown RBP11.17□□□□□ -0.62
CCM2-205ENST00000472223 ZNF561-AS1K7EIQ3 104 aa11.16□□□□□ -0.62
CCM2-205ENST00000472223 LECT2O14960 151 aa11.16□□□□□ -0.62
CCM2-205ENST00000472223 IGKCP01834 107 aa11.16□□□□□ -0.62
CCM2-205ENST00000472223 CDKN2A-AS1Q9UH64 79 aa11.16□□□□□ -0.62
CCM2-205ENST00000472223 IGLV4-69A0A075B6H9 119 aa11.15□□□□□ -0.62
CCM2-205ENST00000472223 A0A087WTM6 91 aa11.15□□□□□ -0.62
CCM2-205ENST00000472223 PRSS2P07478 247 aa11.15□□□□□ -0.62
CCM2-205ENST00000472223 MAPKAPK5-AS1Q8N8E1 139 aa11.15□□□□□ -0.62
CCM2-205ENST00000472223 hDV102S1A0JD36 115 aa11.14□□□□□ -0.63
CCM2-205ENST00000472223 C11orf86A6NJI1 115 aa11.14□□□□□ -0.63
CCM2-205ENST00000472223 TNP2Q05952 138 aa11.14□□□□□ -0.63
CCM2-205ENST00000472223 OR10D4PQ8NGN7 298 aa11.14□□□□□ -0.63
CCM2-205ENST00000472223 IGLV5-45A0A087WSX0 123 aa11.13□□□□□ -0.63
CCM2-205ENST00000472223 LRCOL1A6NCL2 159 aa11.13□□□□□ -0.63
CCM2-205ENST00000472223 ZNF22P17026 224 aaPredicted RBP11.13□□□□□ -0.63
CCM2-205ENST00000472223 HERVK_113P61574 105 aa11.13□□□□□ -0.63
CCM2-205ENST00000472223 ORAOV1Q8WV07 137 aa11.13□□□□□ -0.63
CCM2-205ENST00000472223 PMCHL2Q9BQD1 86 aa11.13□□□□□ -0.63
CCM2-205ENST00000472223 IGHV3-64A0A075B6Q5 118 aa11.12□□□□□ -0.63
CCM2-205ENST00000472223 LINC01545Q5VT33 79 aa11.12□□□□□ -0.63
CCM2-205ENST00000472223 Q8N814 137 aa11.12□□□□□ -0.63
CCM2-205ENST00000472223 RYR2Q92736 4967 aa11.11□□□□□ -0.63
CCM2-205ENST00000472223 HIGD2BQ4VC39 106 aa11.11□□□□□ -0.63
CCM2-205ENST00000472223 TOMM7Q9P0U1 55 aa11.11□□□□□ -0.63
CCM2-205ENST00000472223 GVQW2A0A096LPI5 108 aaPredicted RBP11.1□□□□□ -0.63
CCM2-205ENST00000472223 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.1□□□□□ -0.63
CCM2-205ENST00000472223 SCGB1D1O95968 90 aa11.1□□□□□ -0.63
CCM2-205ENST00000472223 SPINK8P0C7L1 97 aa11.1□□□□□ -0.63
CCM2-205ENST00000472223 SPAG11BQ08648 103 aa11.1□□□□□ -0.63
CCM2-205ENST00000472223 C6orf226Q5I0X4 101 aa11.1□□□□□ -0.63
CCM2-205ENST00000472223 C15orf56Q8N910 161 aa11.1□□□□□ -0.63
CCM2-205ENST00000472223 DNAH2Q9P225 4427 aa11.08□□□□□ -0.63
CCM2-205ENST00000472223 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.08□□□□□ -0.64
CCM2-205ENST00000472223 SMIM1B2RUZ4 78 aa11.08□□□□□ -0.64
CCM2-205ENST00000472223 F8WDY8 70 aa11.08□□□□□ -0.64
CCM2-205ENST00000472223 CKS1BP61024 79 aa11.08□□□□□ -0.64
CCM2-205ENST00000472223 NTN5Q8WTR8 489 aaPredicted RBP11.08□□□□□ -0.64
CCM2-205ENST00000472223 TMEM223A0PJW6 202 aa11.07□□□□□ -0.64
CCM2-205ENST00000472223 WFDC2Q14508 124 aa11.07□□□□□ -0.64
CCM2-205ENST00000472223 Q8IZM0 81 aa11.07□□□□□ -0.64
CCM2-205ENST00000472223 COX7B2Q8TF08 81 aa11.07□□□□□ -0.64
CCM2-205ENST00000472223 CAMK2N2Q96S95 79 aa11.07□□□□□ -0.64
CCM2-205ENST00000472223 PGPEP1Q9NXJ5 209 aa11.07□□□□□ -0.64
CCM2-205ENST00000472223 C2orf48Q96LS8 159 aa11.06□□□□□ -0.64
CCM2-205ENST00000472223 IGLV5-52A0A0A0MRZ9 124 aa11.05□□□□□ -0.64
CCM2-205ENST00000472223 HSBP1L1C9JCN9 74 aa11.05□□□□□ -0.64
CCM2-205ENST00000472223 NDUFA1O15239 70 aa11.05□□□□□ -0.64
CCM2-205ENST00000472223 CXCL5P42830 114 aa11.05□□□□□ -0.64
CCM2-205ENST00000472223 DNAH10Q8IVF4 4471 aa11.05□□□□□ -0.64
CCM2-205ENST00000472223 SYCNQ0VAF6 134 aa11.04□□□□□ -0.64
CCM2-205ENST00000472223 SFTA2Q6UW10 78 aa11.04□□□□□ -0.64
CCM2-205ENST00000472223 PLEKHB2Q96CS7 222 aa11.04□□□□□ -0.64
CCM2-205ENST00000472223 CDPF1Q6NVV7 123 aa11.03□□□□□ -0.64
CCM2-205ENST00000472223 LINC00526Q96FQ7 95 aa11.03□□□□□ -0.64
CCM2-205ENST00000472223 PKIGQ9Y2B9 76 aa11.03□□□□□ -0.64
CCM2-205ENST00000472223 FRAS1Q86XX4 4008 aa11.03□□□□□ -0.64
CCM2-205ENST00000472223 IGLV5-39A0A0G2JS06 123 aa11.02□□□□□ -0.65
CCM2-205ENST00000472223 CNBPP62633 177 aaKnown RBP11.02□□□□□ -0.65
CCM2-205ENST00000472223 ATOH7Q8N100 152 aa11.02□□□□□ -0.65
CCM2-205ENST00000472223 CARD19Q96LW7 228 aa11.02□□□□□ -0.65
CCM2-205ENST00000472223 DNAH17Q9UFH2 4485 aa11.02□□□□□ -0.65
CCM2-205ENST00000472223 LEPROTO15243 131 aa11.01□□□□□ -0.65
CCM2-205ENST00000472223 LGALS3P17931 250 aaKnown RBP11.01□□□□□ -0.65
CCM2-205ENST00000472223 KIAA0087Q14695 138 aa11□□□□□ -0.65
CCM2-205ENST00000472223 STPG4Q8N801 248 aa11□□□□□ -0.65
CCM2-205ENST00000472223 E9PLD3 99 aa10.99□□□□□ -0.65
CCM2-205ENST00000472223 JOSD1Q15040 202 aaPredicted RBP10.99□□□□□ -0.65
CCM2-205ENST00000472223 RYR3Q15413 4870 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms