RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 ORMDL3Q8N138 153 aa5.64□□□□□ -1.51
USF1-204ENST00000472217 C2orf48Q96LS8 159 aa5.64□□□□□ -1.51
USF1-204ENST00000472217 CAMK2N2Q96S95 79 aa5.64□□□□□ -1.51
USF1-204ENST00000472217 IGHV3OR16-9A0A0B4J2B5 98 aa5.63□□□□□ -1.51
USF1-204ENST00000472217 IFITM10A6NMD0 228 aa5.63□□□□□ -1.51
USF1-204ENST00000472217 APOMO95445 188 aa5.63□□□□□ -1.51
USF1-204ENST00000472217 PTTG1IPP53801 180 aa5.63□□□□□ -1.51
USF1-204ENST00000472217 SPAG11BQ08648 103 aa5.63□□□□□ -1.51
USF1-204ENST00000472217 PNRC1Q12796 327 aaPredicted RBP5.63□□□□□ -1.51
USF1-204ENST00000472217 GAGE2BQ13066 116 aa5.63□□□□□ -1.51
USF1-204ENST00000472217 TMEM136Q6ZRR5 245 aa5.63□□□□□ -1.51
USF1-204ENST00000472217 OR10D4PQ8NGN7 298 aa5.63□□□□□ -1.51
USF1-204ENST00000472217 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.62□□□□□ -1.51
USF1-204ENST00000472217 RAB5AP20339 215 aa5.62□□□□□ -1.51
USF1-204ENST00000472217 RAB14P61106 215 aa5.62□□□□□ -1.51
USF1-204ENST00000472217 ORAOV1Q8WV07 137 aa5.62□□□□□ -1.51
USF1-204ENST00000472217 A0A0J9YXV3 536 aa5.61□□□□□ -1.51
USF1-204ENST00000472217 A0A1W2PNN7 141 aa5.61□□□□□ -1.51
USF1-204ENST00000472217 MT-ND4LP03901 98 aa5.61□□□□□ -1.51
USF1-204ENST00000472217 IFI27P40305 119 aaPredicted RBP5.61□□□□□ -1.51
USF1-204ENST00000472217 RPL18AQ02543 176 aaKnown RBP5.61□□□□□ -1.51
USF1-204ENST00000472217 PKHD1L1Q86WI1 4243 aa5.61□□□□□ -1.51
USF1-204ENST00000472217 ANAPC16Q96DE5 110 aa5.61□□□□□ -1.51
USF1-204ENST00000472217 PLA2G2DQ9UNK4 145 aa5.61□□□□□ -1.51
USF1-204ENST00000472217 LAMTOR2Q9Y2Q5 125 aa5.61□□□□□ -1.51
USF1-204ENST00000472217 PYGO1Q9Y3Y4 419 aa5.61□□□□□ -1.51
USF1-204ENST00000472217 IGLV4-3A0A075B6K6 122 aa5.6□□□□□ -1.51
USF1-204ENST00000472217 LOC389332A0A1B0GUA5 103 aa5.6□□□□□ -1.51
USF1-204ENST00000472217 PRSS47A8MTI9 375 aa5.6□□□□□ -1.51
USF1-204ENST00000472217 RNF151Q2KHN1 245 aa5.6□□□□□ -1.51
USF1-204ENST00000472217 MAP1LC3AQ9H492 121 aa5.6□□□□□ -1.51
USF1-204ENST00000472217 FAT3Q8TDW7 4589 aa5.6□□□□□ -1.51
USF1-204ENST00000472217 TGIF2-C20orf24A0A0A6YYL0 155 aa5.59□□□□□ -1.51
USF1-204ENST00000472217 C9orf116Q5BN46 136 aaPredicted RBP5.59□□□□□ -1.51
USF1-204ENST00000472217 CLLU1Q5K131 121 aa5.59□□□□□ -1.51
USF1-204ENST00000472217 LINC00242Q5T6M2 205 aa5.59□□□□□ -1.51
USF1-204ENST00000472217 C10orf25Q5T742 122 aa5.59□□□□□ -1.51
USF1-204ENST00000472217 Q6ZRP5 223 aa5.59□□□□□ -1.51
USF1-204ENST00000472217 Q8N8P6 123 aa5.59□□□□□ -1.51
USF1-204ENST00000472217 TMEM141Q96I45 108 aa5.59□□□□□ -1.51
USF1-204ENST00000472217 MRPL35Q9NZE8 188 aaKnown RBP5.59□□□□□ -1.51
USF1-204ENST00000472217 CYSLTR1Q9Y271 337 aa5.59□□□□□ -1.51
USF1-204ENST00000472217 A0A087WZ39 114 aa5.58□□□□□ -1.52
USF1-204ENST00000472217 F8WDY8 70 aa5.58□□□□□ -1.52
USF1-204ENST00000472217 NDUFA1O15239 70 aa5.58□□□□□ -1.52
USF1-204ENST00000472217 SPINK6Q6UWN8 80 aa5.58□□□□□ -1.52
USF1-204ENST00000472217 C2orf66Q6UXQ4 117 aa5.58□□□□□ -1.52
USF1-204ENST00000472217 UNQ6190/PRO20217Q6UXQ8 127 aa5.58□□□□□ -1.52
USF1-204ENST00000472217 TEX43Q6ZNM6 134 aa5.58□□□□□ -1.52
USF1-204ENST00000472217 LINC01600Q96MT4 127 aa5.58□□□□□ -1.52
USF1-204ENST00000472217 HMCN2Q8NDA2 5059 aa5.57□□□□□ -1.52
USF1-204ENST00000472217 ADCYAP1P18509 176 aa5.57□□□□□ -1.52
USF1-204ENST00000472217 UBE2D1P51668 147 aa5.57□□□□□ -1.52
USF1-204ENST00000472217 SRSF9Q13242 221 aaKnown RBP eCLIP5.57□□□□□ -1.52
USF1-204ENST00000472217 KIAA0087Q14695 138 aa5.57□□□□□ -1.52
USF1-204ENST00000472217 ZC2HC1BQ5TFG8 222 aa5.57□□□□□ -1.52
USF1-204ENST00000472217 LINC00173Q6ZV60 143 aa5.57□□□□□ -1.52
USF1-204ENST00000472217 IMMP2LQ96T52 175 aa5.57□□□□□ -1.52
USF1-204ENST00000472217 C6orf48Q9UBA6 75 aa5.57□□□□□ -1.52
USF1-204ENST00000472217 TLX1NBP0CAT3 122 aa5.56□□□□□ -1.52
USF1-204ENST00000472217 ORMDL2Q53FV1 153 aa5.56□□□□□ -1.52
USF1-204ENST00000472217 REG3GQ6UW15 175 aa5.56□□□□□ -1.52
USF1-204ENST00000472217 Q6ZN92 141 aa5.56□□□□□ -1.52
USF1-204ENST00000472217 PHF5AQ7RTV0 110 aaKnown RBP5.56□□□□□ -1.52
USF1-204ENST00000472217 AMELXQ99217 191 aa5.56□□□□□ -1.52
USF1-204ENST00000472217 CTDSP1Q9GZU7 261 aa5.56□□□□□ -1.52
USF1-204ENST00000472217 NXT2Q9NPJ8 142 aaKnown RBP5.56□□□□□ -1.52
USF1-204ENST00000472217 PSORS1C2Q9UIG4 136 aa5.56□□□□□ -1.52
USF1-204ENST00000472217 FAM168BA1KXE4 195 aa5.55□□□□□ -1.52
USF1-204ENST00000472217 IGIPA6NJ69 53 aa5.55□□□□□ -1.52
USF1-204ENST00000472217 K7EMI3 77 aa5.55□□□□□ -1.52
USF1-204ENST00000472217 IFITM2Q01629 132 aa5.55□□□□□ -1.52
USF1-204ENST00000472217 ODF1Q14990 250 aa5.55□□□□□ -1.52
USF1-204ENST00000472217 UQCC3Q6UW78 93 aa5.55□□□□□ -1.52
USF1-204ENST00000472217 C2orf82Q6UX34 121 aa5.55□□□□□ -1.52
USF1-204ENST00000472217 C2orf88Q9BSF0 95 aa5.55□□□□□ -1.52
USF1-204ENST00000472217 TRBV30A0A0K0K1B3 111 aa5.54□□□□□ -1.52
USF1-204ENST00000472217 TMEM218A2RU14 115 aa5.54□□□□□ -1.52
USF1-204ENST00000472217 MT-ND6P03923 174 aa5.54□□□□□ -1.52
USF1-204ENST00000472217 NPSP0C0P6 89 aa5.54□□□□□ -1.52
USF1-204ENST00000472217 KIAA1644Q3SXP7 199 aa5.54□□□□□ -1.52
USF1-204ENST00000472217 GAGE2EQ4V326 116 aa5.54□□□□□ -1.52
USF1-204ENST00000472217 FAM19A5Q7Z5A7 132 aaPredicted RBP5.54□□□□□ -1.52
USF1-204ENST00000472217 FAM19A3Q7Z5A8 133 aa5.54□□□□□ -1.52
USF1-204ENST00000472217 LINC01561Q8N1V8 128 aa5.54□□□□□ -1.52
USF1-204ENST00000472217 VCX2Q9H322 139 aa5.54□□□□□ -1.52
USF1-204ENST00000472217 GAGE2DQ9UEU5 116 aa5.54□□□□□ -1.52
USF1-204ENST00000472217 TRAV9-1A0A075B6T8 112 aa5.53□□□□□ -1.52
USF1-204ENST00000472217 KRTAP10-8P60410 259 aa5.53□□□□□ -1.52
USF1-204ENST00000472217 C1orf137Q5JT78 98 aa5.53□□□□□ -1.52
USF1-204ENST00000472217 KRTAP11-1Q8IUC1 163 aa5.53□□□□□ -1.52
USF1-204ENST00000472217 NDUFC2-KCTD14E9PQ53 114 aa5.52□□□□□ -1.53
USF1-204ENST00000472217 EIF4EBP3O60516 100 aaPredicted RBP5.52□□□□□ -1.53
USF1-204ENST00000472217 PAPPA-AS1Q5QFB9 102 aa5.52□□□□□ -1.53
USF1-204ENST00000472217 KRTAP7-1Q8IUC3 87 aa5.52□□□□□ -1.53
USF1-204ENST00000472217 TOMM6Q96B49 74 aa5.52□□□□□ -1.53
USF1-204ENST00000472217 PACRGQ96M98 296 aaPredicted RBP5.52□□□□□ -1.53
USF1-204ENST00000472217 TIMM17AQ99595 171 aa5.52□□□□□ -1.53
USF1-204ENST00000472217 SEC11CQ9BY50 192 aa5.52□□□□□ -1.53
USF1-204ENST00000472217 TOMM7Q9P0U1 55 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms