RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 A0A1W2PNN7 141 aa13.97□□□□□ -0.17
C9orf3-213ENST00000471978 OR10D4PQ8NGN7 298 aa13.97□□□□□ -0.17
C9orf3-213ENST00000471978 OPRPNQ99935 248 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-213ENST00000471978 PPBPP02775 128 aa13.96□□□□□ -0.17
C9orf3-213ENST00000471978 MRPS36P82909 103 aaKnown RBP13.96□□□□□ -0.17
C9orf3-213ENST00000471978 RPL18AQ02543 176 aaKnown RBP13.96□□□□□ -0.17
C9orf3-213ENST00000471978 SRSF9Q13242 221 aaKnown RBP eCLIP13.96□□□□□ -0.17
C9orf3-213ENST00000471978 REG3GQ6UW15 175 aa13.96□□□□□ -0.17
C9orf3-213ENST00000471978 A0A0J9YXV3 536 aa13.95□□□□□ -0.18
C9orf3-213ENST00000471978 IGHV3OR16-9A0A0B4J2B5 98 aa13.94□□□□□ -0.18
C9orf3-213ENST00000471978 RNF151Q2KHN1 245 aa13.94□□□□□ -0.18
C9orf3-213ENST00000471978 C9orf116Q5BN46 136 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-213ENST00000471978 ORAOV1Q8WV07 137 aa13.94□□□□□ -0.18
C9orf3-213ENST00000471978 IFITM10A6NMD0 228 aa13.93□□□□□ -0.18
C9orf3-213ENST00000471978 ORMDL3Q8N138 153 aa13.93□□□□□ -0.18
C9orf3-213ENST00000471978 RAB5AP20339 215 aa13.92□□□□□ -0.18
C9orf3-213ENST00000471978 TMEM136Q6ZRR5 245 aa13.92□□□□□ -0.18
C9orf3-213ENST00000471978 ATP5L2Q7Z4Y8 100 aa13.92□□□□□ -0.18
C9orf3-213ENST00000471978 PRELID3AQ96N28 172 aa13.91□□□□□ -0.18
C9orf3-213ENST00000471978 MRPL35Q9NZE8 188 aaKnown RBP13.91□□□□□ -0.18
C9orf3-213ENST00000471978 F8WDY8 70 aa13.9□□□□□ -0.18
C9orf3-213ENST00000471978 ODF1Q14990 250 aa13.9□□□□□ -0.18
C9orf3-213ENST00000471978 NDUFA1O15239 70 aa13.89□□□□□ -0.19
C9orf3-213ENST00000471978 IFI27P40305 119 aaPredicted RBP13.89□□□□□ -0.19
C9orf3-213ENST00000471978 KRTAP10-8P60410 259 aa13.89□□□□□ -0.19
C9orf3-213ENST00000471978 LRP2P98164 4655 aa13.89□□□□□ -0.19
C9orf3-213ENST00000471978 MT-ND6P03923 174 aa13.88□□□□□ -0.19
C9orf3-213ENST00000471978 PHF5AQ7RTV0 110 aaKnown RBP13.88□□□□□ -0.19
C9orf3-213ENST00000471978 IMMP2LQ96T52 175 aa13.88□□□□□ -0.19
C9orf3-213ENST00000471978 PSORS1C2Q9UIG4 136 aa13.88□□□□□ -0.19
C9orf3-213ENST00000471978 TGIF2-C20orf24A0A0A6YYL0 155 aa13.87□□□□□ -0.19
C9orf3-213ENST00000471978 C10orf25Q5T742 122 aa13.87□□□□□ -0.19
C9orf3-213ENST00000471978 PYGO1Q9Y3Y4 419 aa13.87□□□□□ -0.19
C9orf3-213ENST00000471978 UNQ6190/PRO20217Q6UXQ8 127 aa13.86□□□□□ -0.19
C9orf3-213ENST00000471978 LOC389332A0A1B0GUA5 103 aa13.85□□□□□ -0.19
C9orf3-213ENST00000471978 IGLV4-3A0A075B6K6 122 aa13.84□□□□□ -0.19
C9orf3-213ENST00000471978 PRSS47A8MTI9 375 aa13.84□□□□□ -0.19
C9orf3-213ENST00000471978 C1orf137Q5JT78 98 aa13.84□□□□□ -0.19
C9orf3-213ENST00000471978 TMEM141Q96I45 108 aa13.84□□□□□ -0.19
C9orf3-213ENST00000471978 C6orf48Q9UBA6 75 aa13.84□□□□□ -0.19
C9orf3-213ENST00000471978 A0A087WZ39 114 aa13.83□□□□□ -0.2
C9orf3-213ENST00000471978 TLX1NBP0CAT3 122 aa13.83□□□□□ -0.2
C9orf3-213ENST00000471978 LINC00242Q5T6M2 205 aa13.83□□□□□ -0.2
C9orf3-213ENST00000471978 MAP1LC3AQ9H492 121 aa13.83□□□□□ -0.2
C9orf3-213ENST00000471978 LAMTOR2Q9Y2Q5 125 aa13.83□□□□□ -0.2
C9orf3-213ENST00000471978 PNRC1Q12796 327 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-213ENST00000471978 FAM168BA1KXE4 195 aa13.81□□□□□ -0.2
C9orf3-213ENST00000471978 MT-ND4LP03901 98 aa13.81□□□□□ -0.2
C9orf3-213ENST00000471978 KIAA0087Q14695 138 aa13.81□□□□□ -0.2
C9orf3-213ENST00000471978 GAGE2EQ4V326 116 aa13.8□□□□□ -0.2
C9orf3-213ENST00000471978 TEX43Q6ZNM6 134 aa13.8□□□□□ -0.2
C9orf3-213ENST00000471978 ANAPC16Q96DE5 110 aa13.8□□□□□ -0.2
C9orf3-213ENST00000471978 GAGE2DQ9UEU5 116 aa13.8□□□□□ -0.2
C9orf3-213ENST00000471978 Q8N8P6 123 aa13.79□□□□□ -0.2
C9orf3-213ENST00000471978 UBE2D1P51668 147 aa13.78□□□□□ -0.2
C9orf3-213ENST00000471978 FAM19A5Q7Z5A7 132 aaPredicted RBP13.78□□□□□ -0.2
C9orf3-213ENST00000471978 C2orf88Q9BSF0 95 aa13.78□□□□□ -0.2
C9orf3-213ENST00000471978 CYSLTR1Q9Y271 337 aa13.78□□□□□ -0.2
C9orf3-213ENST00000471978 RAB14P61106 215 aa13.77□□□□□ -0.21
C9orf3-213ENST00000471978 C2orf66Q6UXQ4 117 aa13.77□□□□□ -0.21
C9orf3-213ENST00000471978 ZC2HC1BQ5TFG8 222 aa13.76□□□□□ -0.21
C9orf3-213ENST00000471978 C2orf82Q6UX34 121 aa13.76□□□□□ -0.21
C9orf3-213ENST00000471978 Q6ZN92 141 aa13.76□□□□□ -0.21
C9orf3-213ENST00000471978 TRBV30A0A0K0K1B3 111 aa13.75□□□□□ -0.21
C9orf3-213ENST00000471978 IGLV7-43P04211 117 aa13.75□□□□□ -0.21
C9orf3-213ENST00000471978 ORMDL2Q53FV1 153 aa13.75□□□□□ -0.21
C9orf3-213ENST00000471978 VCX2Q9H322 139 aa13.75□□□□□ -0.21
C9orf3-213ENST00000471978 LINC00173Q6ZV60 143 aa13.74□□□□□ -0.21
C9orf3-213ENST00000471978 KRTAP11-1Q8IUC1 163 aa13.74□□□□□ -0.21
C9orf3-213ENST00000471978 LINC01561Q8N1V8 128 aa13.74□□□□□ -0.21
C9orf3-213ENST00000471978 PACRGQ96M98 296 aaPredicted RBP13.74□□□□□ -0.21
C9orf3-213ENST00000471978 DIRC1Q969H9 104 aa13.73□□□□□ -0.21
C9orf3-213ENST00000471978 AMELXQ99217 191 aa13.73□□□□□ -0.21
C9orf3-213ENST00000471978 NDUFC2-KCTD14E9PQ53 114 aa13.72□□□□□ -0.21
C9orf3-213ENST00000471978 KRTAP7-1Q8IUC3 87 aa13.72□□□□□ -0.21
C9orf3-213ENST00000471978 IGIPA6NJ69 53 aa13.71□□□□□ -0.21
C9orf3-213ENST00000471978 K7EMI3 77 aa13.71□□□□□ -0.21
C9orf3-213ENST00000471978 NPSP0C0P6 89 aa13.71□□□□□ -0.21
C9orf3-213ENST00000471978 CTDSP1Q9GZU7 261 aa13.71□□□□□ -0.21
C9orf3-213ENST00000471978 M0QXV9 152 aa13.7□□□□□ -0.22
C9orf3-213ENST00000471978 PRSS2P07478 247 aa13.7□□□□□ -0.22
C9orf3-213ENST00000471978 NXT2Q9NPJ8 142 aaKnown RBP13.7□□□□□ -0.22
C9orf3-213ENST00000471978 RNF213Q63HN8 5207 aa13.7□□□□□ -0.22
C9orf3-213ENST00000471978 UBE2BP63146 152 aa13.69□□□□□ -0.22
C9orf3-213ENST00000471978 TOMM7Q9P0U1 55 aa13.69□□□□□ -0.22
C9orf3-213ENST00000471978 CKS1BP61024 79 aa13.68□□□□□ -0.22
C9orf3-213ENST00000471978 C9orf129Q5T035 196 aaKnown RBP13.68□□□□□ -0.22
C9orf3-213ENST00000471978 FAM19A3Q7Z5A8 133 aa13.68□□□□□ -0.22
C9orf3-213ENST00000471978 H0Y9J4 135 aa13.67□□□□□ -0.22
C9orf3-213ENST00000471978 C6orf226Q5I0X4 101 aa13.67□□□□□ -0.22
C9orf3-213ENST00000471978 PRR26Q8N8Z3 221 aa13.66□□□□□ -0.22
C9orf3-213ENST00000471978 G0S2P27469 103 aa13.65□□□□□ -0.22
C9orf3-213ENST00000471978 PAPPA-AS1Q5QFB9 102 aa13.65□□□□□ -0.22
C9orf3-213ENST00000471978 Q8IZM0 81 aa13.65□□□□□ -0.22
C9orf3-213ENST00000471978 ALKBH7Q9BT30 221 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-213ENST00000471978 HERVK_113P63121 156 aa13.64□□□□□ -0.23
C9orf3-213ENST00000471978 SEC11AP67812 179 aa13.64□□□□□ -0.23
C9orf3-213ENST00000471978 KIAA1644Q3SXP7 199 aa13.63□□□□□ -0.23
C9orf3-213ENST00000471978 CLLU1Q5K131 121 aa13.63□□□□□ -0.23
C9orf3-213ENST00000471978 TOMM6Q96B49 74 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms