RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 PF4P02776 101 aa4.54□□□□□ -1.68
SPEN-204ENST00000471538 VSIG2Q96IQ7 327 aa4.54□□□□□ -1.68
SPEN-204ENST00000471538 LITAFQ99732 161 aa4.54□□□□□ -1.68
SPEN-204ENST00000471538 GTSF1LQ9H1H1 148 aa4.54□□□□□ -1.68
SPEN-204ENST00000471538 SACSQ9NZJ4 4579 aa4.54□□□□□ -1.68
SPEN-204ENST00000471538 TRAV8-3A0A0A6YYJ7 113 aa4.53□□□□□ -1.68
SPEN-204ENST00000471538 GAGE12JA6NER3 117 aa4.53□□□□□ -1.68
SPEN-204ENST00000471538 GAGE7O76087 117 aa4.53□□□□□ -1.68
SPEN-204ENST00000471538 TSPAN13O95857 204 aa4.53□□□□□ -1.68
SPEN-204ENST00000471538 CFC1BP0CG36 223 aa4.53□□□□□ -1.68
SPEN-204ENST00000471538 CFC1P0CG37 223 aa4.53□□□□□ -1.68
SPEN-204ENST00000471538 GAGE12FP0CL80 117 aa4.53□□□□□ -1.68
SPEN-204ENST00000471538 GAGE12GP0CL81 117 aa4.53□□□□□ -1.68
SPEN-204ENST00000471538 GAGE12IP0CL82 117 aa4.53□□□□□ -1.68
SPEN-204ENST00000471538 INSL3P51460 131 aa4.53□□□□□ -1.68
SPEN-204ENST00000471538 GAGE4Q13068 117 aa4.53□□□□□ -1.68
SPEN-204ENST00000471538 GAGE5Q13069 117 aa4.53□□□□□ -1.68
SPEN-204ENST00000471538 SRSF9Q13242 221 aaKnown RBP eCLIP4.53□□□□□ -1.68
SPEN-204ENST00000471538 FHL2Q14192 279 aa4.53□□□□□ -1.68
SPEN-204ENST00000471538 GAGE13Q4V321 117 aa4.53□□□□□ -1.68
SPEN-204ENST00000471538 OCIAD2Q56VL3 154 aa4.53□□□□□ -1.68
SPEN-204ENST00000471538 KIR2DL5BQ8NHK3 375 aa4.53□□□□□ -1.68
SPEN-204ENST00000471538 IGLV5-39A0A0G2JS06 123 aa4.52□□□□□ -1.69
SPEN-204ENST00000471538 LOC100131303A0A0U1RQF7 123 aa4.52□□□□□ -1.69
SPEN-204ENST00000471538 COX6A2Q02221 97 aa4.52□□□□□ -1.69
SPEN-204ENST00000471538 LINC00242Q5T6M2 205 aa4.52□□□□□ -1.69
SPEN-204ENST00000471538 C9orf66Q5T8R8 295 aa4.52□□□□□ -1.69
SPEN-204ENST00000471538 ZFAND6Q6FIF0 208 aa4.52□□□□□ -1.69
SPEN-204ENST00000471538 CITED1Q99966 193 aa4.52□□□□□ -1.69
SPEN-204ENST00000471538 SPANXDQ9BXN6 97 aa4.52□□□□□ -1.69
SPEN-204ENST00000471538 CDC42SE2Q9NRR3 84 aa4.52□□□□□ -1.69
SPEN-204ENST00000471538 SPANXCQ9NY87 97 aa4.52□□□□□ -1.69
SPEN-204ENST00000471538 CDKN2A-AS1Q9UH64 79 aa4.52□□□□□ -1.69
SPEN-204ENST00000471538 PRO0461Q9UI25 63 aa4.52□□□□□ -1.69
SPEN-204ENST00000471538 X6R8D5 127 aa4.52□□□□□ -1.69
SPEN-204ENST00000471538 TENM3Q9P273 2699 aa4.51□□□□□ -1.69
SPEN-204ENST00000471538 TRGV2A0A075B6R0 118 aa4.51□□□□□ -1.69
SPEN-204ENST00000471538 A0A0B4J2C4 111 aa4.51□□□□□ -1.69
SPEN-204ENST00000471538 A8MZ25 164 aa4.51□□□□□ -1.69
SPEN-204ENST00000471538 TMEM238C9JI98 176 aa4.51□□□□□ -1.69
SPEN-204ENST00000471538 H7C423 109 aa4.51□□□□□ -1.69
SPEN-204ENST00000471538 SPINK8P0C7L1 97 aa4.51□□□□□ -1.69
SPEN-204ENST00000471538 MUSTN1Q8IVN3 82 aa4.51□□□□□ -1.69
SPEN-204ENST00000471538 A4D1N5 150 aa4.5□□□□□ -1.69
SPEN-204ENST00000471538 SMIM9A6NGZ8 99 aa4.5□□□□□ -1.69
SPEN-204ENST00000471538 F5H768 121 aa4.5□□□□□ -1.69
SPEN-204ENST00000471538 NDUFA1O15239 70 aa4.5□□□□□ -1.69
SPEN-204ENST00000471538 TIMM17BO60830 172 aa4.5□□□□□ -1.69
SPEN-204ENST00000471538 APOMO95445 188 aa4.5□□□□□ -1.69
SPEN-204ENST00000471538 HERVK_113P63121 156 aa4.5□□□□□ -1.69
SPEN-204ENST00000471538 SMAGPQ0VAQ4 97 aa4.5□□□□□ -1.69
SPEN-204ENST00000471538 ADAMTSL4-AS1Q5T5F5 129 aa4.5□□□□□ -1.69
SPEN-204ENST00000471538 DGAT2L7PQ6IED9 249 aa4.5□□□□□ -1.69
SPEN-204ENST00000471538 TMEM101Q96IK0 257 aa4.5□□□□□ -1.69
SPEN-204ENST00000471538 TMEM243Q9BU79 118 aa4.5□□□□□ -1.69
SPEN-204ENST00000471538 GEMIN7Q9H840 131 aaKnown RBP4.5□□□□□ -1.69
SPEN-204ENST00000471538 NDUFA12Q9UI09 145 aa4.5□□□□□ -1.69
SPEN-204ENST00000471538 DNAH1Q9P2D7 4330 aa4.5□□□□□ -1.69
SPEN-204ENST00000471538 COL7A1Q02388 2944 aa4.5□□□□□ -1.69
SPEN-204ENST00000471538 TRGV4A0A0C4DH28 118 aa4.49□□□□□ -1.69
SPEN-204ENST00000471538 SMIM1B2RUZ4 78 aa4.49□□□□□ -1.69
SPEN-204ENST00000471538 F8W1H4 67 aa4.49□□□□□ -1.69
SPEN-204ENST00000471538 H3BMG7 143 aa4.49□□□□□ -1.69
SPEN-204ENST00000471538 IGHV3-33P01772 117 aa4.49□□□□□ -1.69
SPEN-204ENST00000471538 RPL24P83731 157 aaKnown RBP4.49□□□□□ -1.69
SPEN-204ENST00000471538 MIAQ16674 131 aa4.49□□□□□ -1.69
SPEN-204ENST00000471538 PRO1854Q9UHT4 67 aa4.49□□□□□ -1.69
SPEN-204ENST00000471538 TRBV6-8A0A0A6YYG3 113 aa4.48□□□□□ -1.69
SPEN-204ENST00000471538 G3V4G9 280 aa4.48□□□□□ -1.69
SPEN-204ENST00000471538 K7ERU9 68 aa4.48□□□□□ -1.69
SPEN-204ENST00000471538 WFDC2Q14508 124 aa4.48□□□□□ -1.69
SPEN-204ENST00000471538 WFDC9Q8NEX5 89 aa4.48□□□□□ -1.69
SPEN-204ENST00000471538 RNF183Q96D59 192 aa4.48□□□□□ -1.69
SPEN-204ENST00000471538 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.47□□□□□ -1.69
SPEN-204ENST00000471538 TRAV13-1A0A0B4J241 112 aa4.47□□□□□ -1.69
SPEN-204ENST00000471538 UBE2L6O14933 153 aa4.47□□□□□ -1.69
SPEN-204ENST00000471538 ZNF625Q96I27 306 aaPredicted RBP4.47□□□□□ -1.69
SPEN-204ENST00000471538 CBY1Q9Y3M2 126 aa4.47□□□□□ -1.69
SPEN-204ENST00000471538 NOTCH3Q9UM47 2321 aa4.47□□□□□ -1.69
SPEN-204ENST00000471538 IGLV4-60A0A075B6I1 120 aa4.46□□□□□ -1.69
SPEN-204ENST00000471538 TEX48A0A1B0GUV7 120 aa4.46□□□□□ -1.69
SPEN-204ENST00000471538 LYRM9A8MSI8 78 aa4.46□□□□□ -1.69
SPEN-204ENST00000471538 TCL1BO95988 128 aa4.46□□□□□ -1.69
SPEN-204ENST00000471538 DEFB130BP0DP73 79 aa4.46□□□□□ -1.69
SPEN-204ENST00000471538 DEFB130AP0DP74 79 aa4.46□□□□□ -1.69
SPEN-204ENST00000471538 IFITM1P13164 125 aa4.46□□□□□ -1.69
SPEN-204ENST00000471538 GAGE6Q13070 117 aa4.46□□□□□ -1.69
SPEN-204ENST00000471538 LYRM7Q5U5X0 104 aa4.46□□□□□ -1.69
SPEN-204ENST00000471538 DNAH7Q8WXX0 4024 aa4.46□□□□□ -1.7
SPEN-204ENST00000471538 TRBV20-1A0A075B6N2 111 aa4.46□□□□□ -1.7
SPEN-204ENST00000471538 LOC107984156A0A0G2JMH3 177 aa4.46□□□□□ -1.7
SPEN-204ENST00000471538 APOC4P55056 127 aa4.46□□□□□ -1.7
SPEN-204ENST00000471538 RNF151Q2KHN1 245 aa4.46□□□□□ -1.7
SPEN-204ENST00000471538 FAM222AQ5U5X8 452 aa4.46□□□□□ -1.7
SPEN-204ENST00000471538 ARL17AQ8IVW1 177 aa4.46□□□□□ -1.7
SPEN-204ENST00000471538 Q8NAQ8 132 aa4.46□□□□□ -1.7
SPEN-204ENST00000471538 PPDPFQ9H3Y8 114 aa4.46□□□□□ -1.7
SPEN-204ENST00000471538 Q9H8V8 135 aa4.46□□□□□ -1.7
SPEN-204ENST00000471538 PRO0255Q9UI72 69 aa4.46□□□□□ -1.7
SPEN-204ENST00000471538 ERG28Q9UKR5 140 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms