RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 C7orf77A4D0Y5 90 aa4.03□□□□□ -1.76
HDAC1-204ENST00000471488 ZNF861PO60384 105 aa4.03□□□□□ -1.76
HDAC1-204ENST00000471488 TSHBP01222 138 aa4.03□□□□□ -1.76
HDAC1-204ENST00000471488 ESDP10768 282 aa4.03□□□□□ -1.76
HDAC1-204ENST00000471488 GNG4P50150 75 aa4.03□□□□□ -1.76
HDAC1-204ENST00000471488 C10orf25Q5T742 122 aa4.03□□□□□ -1.76
HDAC1-204ENST00000471488 UNQ6190/PRO20217Q6UXQ8 127 aa4.03□□□□□ -1.76
HDAC1-204ENST00000471488 RPP21Q9H633 154 aaKnown RBP4.03□□□□□ -1.76
HDAC1-204ENST00000471488 ST20Q9HBF5 79 aa4.03□□□□□ -1.76
HDAC1-204ENST00000471488 GNG13Q9P2W3 67 aa4.03□□□□□ -1.76
HDAC1-204ENST00000471488 C5orf52A6NGY3 159 aa4.02□□□□□ -1.77
HDAC1-204ENST00000471488 TMEM238C9JI98 176 aa4.02□□□□□ -1.77
HDAC1-204ENST00000471488 DLEU1O43261 78 aa4.02□□□□□ -1.77
HDAC1-204ENST00000471488 RNF151Q2KHN1 245 aa4.02□□□□□ -1.77
HDAC1-204ENST00000471488 LINC00337Q8N6G1 96 aa4.02□□□□□ -1.77
HDAC1-204ENST00000471488 LINC00304Q8N9R0 145 aa4.02□□□□□ -1.77
HDAC1-204ENST00000471488 CTDSP1Q9GZU7 261 aa4.02□□□□□ -1.77
HDAC1-204ENST00000471488 RNASE7Q9H1E1 156 aaKnown RBP4.02□□□□□ -1.77
HDAC1-204ENST00000471488 MRPL35Q9NZE8 188 aaKnown RBP4.02□□□□□ -1.77
HDAC1-204ENST00000471488 G3V3Q6 166 aa4.01□□□□□ -1.77
HDAC1-204ENST00000471488 PPBPP02775 128 aa4.01□□□□□ -1.77
HDAC1-204ENST00000471488 Q6ZUT4 128 aa4.01□□□□□ -1.77
HDAC1-204ENST00000471488 NUDT10Q8NFP7 164 aa4.01□□□□□ -1.77
HDAC1-204ENST00000471488 OR10D4PQ8NGN7 298 aa4.01□□□□□ -1.77
HDAC1-204ENST00000471488 PPDPFQ9H3Y8 114 aa4.01□□□□□ -1.77
HDAC1-204ENST00000471488 SMDT1Q9H4I9 107 aa4.01□□□□□ -1.77
HDAC1-204ENST00000471488 C6orf48Q9UBA6 75 aa4.01□□□□□ -1.77
HDAC1-204ENST00000471488 MUC17Q685J3 4493 aa4.01□□□□□ -1.77
HDAC1-204ENST00000471488 ARPC5O15511 151 aa4□□□□□ -1.77
HDAC1-204ENST00000471488 CTRLP40313 264 aa4□□□□□ -1.77
HDAC1-204ENST00000471488 RPL28P46779 137 aaKnown RBP4□□□□□ -1.77
HDAC1-204ENST00000471488 SMAGPQ0VAQ4 97 aa4□□□□□ -1.77
HDAC1-204ENST00000471488 TPRXLQ17RH7 258 aa4□□□□□ -1.77
HDAC1-204ENST00000471488 TMEM241Q24JQ0 296 aa4□□□□□ -1.77
HDAC1-204ENST00000471488 LINC00242Q5T6M2 205 aa4□□□□□ -1.77
HDAC1-204ENST00000471488 MRPL52Q86TS9 123 aaKnown RBP4□□□□□ -1.77
HDAC1-204ENST00000471488 NUDT11Q96G61 164 aa4□□□□□ -1.77
HDAC1-204ENST00000471488 IGKV2D-26A0A0A0MRZ7 120 aa3.99□□□□□ -1.77
HDAC1-204ENST00000471488 H0Y8G0 127 aa3.99□□□□□ -1.77
HDAC1-204ENST00000471488 SMKR1H3BMG3 65 aa3.99□□□□□ -1.77
HDAC1-204ENST00000471488 DDTP30046 118 aa3.99□□□□□ -1.77
HDAC1-204ENST00000471488 CEBPGP53567 150 aa3.99□□□□□ -1.77
HDAC1-204ENST00000471488 BLOC1S1P78537 153 aa3.99□□□□□ -1.77
HDAC1-204ENST00000471488 FAM74A3Q4VXF1 159 aa3.99□□□□□ -1.77
HDAC1-204ENST00000471488 C9orf129Q5T035 196 aaKnown RBP3.99□□□□□ -1.77
HDAC1-204ENST00000471488 C2orf82Q6UX34 121 aa3.99□□□□□ -1.77
HDAC1-204ENST00000471488 KRTAP7-1Q8IUC3 87 aa3.99□□□□□ -1.77
HDAC1-204ENST00000471488 BORCS7Q96B45 105 aa3.99□□□□□ -1.77
HDAC1-204ENST00000471488 PACRGQ96M98 296 aaPredicted RBP3.99□□□□□ -1.77
HDAC1-204ENST00000471488 GAGE10A6NGK3 116 aa3.98□□□□□ -1.77
HDAC1-204ENST00000471488 RPL37AP8A6NKH3 93 aa3.98□□□□□ -1.77
HDAC1-204ENST00000471488 IFITM10A6NMD0 228 aa3.98□□□□□ -1.77
HDAC1-204ENST00000471488 NUPR1O60356 82 aa3.98□□□□□ -1.77
HDAC1-204ENST00000471488 UBE2AP49459 152 aa3.98□□□□□ -1.77
HDAC1-204ENST00000471488 RAB5BP61020 215 aa3.98□□□□□ -1.77
HDAC1-204ENST00000471488 MBD3L1Q8WWY6 194 aa3.98□□□□□ -1.77
HDAC1-204ENST00000471488 XAGE1AQ9HD64 81 aa3.98□□□□□ -1.77
HDAC1-204ENST00000471488 MANBALQ9NQG1 85 aa3.98□□□□□ -1.77
HDAC1-204ENST00000471488 UBE2D4Q9Y2X8 147 aa3.98□□□□□ -1.77
HDAC1-204ENST00000471488 C22orf24Q9Y442 160 aa3.98□□□□□ -1.77
HDAC1-204ENST00000471488 TRBV20OR9-2A0A075B6H5 130 aa3.97□□□□□ -1.77
HDAC1-204ENST00000471488 TGIF2-C20orf24A0A0A6YYL0 155 aa3.97□□□□□ -1.77
HDAC1-204ENST00000471488 TRBV6-5A0A0K0K1A5 114 aa3.97□□□□□ -1.77
HDAC1-204ENST00000471488 NDUFC2-KCTD14E9PQ53 114 aa3.97□□□□□ -1.77
HDAC1-204ENST00000471488 GIPP09681 153 aaPredicted RBP3.97□□□□□ -1.77
HDAC1-204ENST00000471488 TLX1NBP0CAT3 122 aa3.97□□□□□ -1.77
HDAC1-204ENST00000471488 CCL20P78556 96 aa3.97□□□□□ -1.77
HDAC1-204ENST00000471488 KRTAP13-2Q52LG2 175 aa3.97□□□□□ -1.77
HDAC1-204ENST00000471488 TMEM18Q96B42 140 aa3.97□□□□□ -1.77
HDAC1-204ENST00000471488 KIR2DL4Q99706 377 aa3.97□□□□□ -1.77
HDAC1-204ENST00000471488 TOMM7Q9P0U1 55 aa3.97□□□□□ -1.77
HDAC1-204ENST00000471488 UMAD1C9J7I0 102 aa3.96□□□□□ -1.78
HDAC1-204ENST00000471488 F8WDY8 70 aa3.96□□□□□ -1.78
HDAC1-204ENST00000471488 VCYO14598 125 aa3.96□□□□□ -1.78
HDAC1-204ENST00000471488 BCE1O60756 84 aa3.96□□□□□ -1.78
HDAC1-204ENST00000471488 PRSS2P07478 247 aa3.96□□□□□ -1.78
HDAC1-204ENST00000471488 SNRPEP62304 92 aaKnown RBP3.96□□□□□ -1.78
HDAC1-204ENST00000471488 C11orf52Q96A22 123 aa3.96□□□□□ -1.78
HDAC1-204ENST00000471488 CYTL1Q9NRR1 136 aa3.96□□□□□ -1.78
HDAC1-204ENST00000471488 TRBV27A0A0K0K1C4 114 aa3.95□□□□□ -1.78
HDAC1-204ENST00000471488 TSTD3H0UI37 97 aa3.95□□□□□ -1.78
HDAC1-204ENST00000471488 SMLR1H3BR10 107 aa3.95□□□□□ -1.78
HDAC1-204ENST00000471488 POLR2KP53803 58 aaKnown RBP3.95□□□□□ -1.78
HDAC1-204ENST00000471488 CKS1BP61024 79 aa3.95□□□□□ -1.78
HDAC1-204ENST00000471488 RPL39P62891 51 aaKnown RBP3.95□□□□□ -1.78
HDAC1-204ENST00000471488 HBBP68871 147 aa3.95□□□□□ -1.78
HDAC1-204ENST00000471488 MRPL55Q7Z7F7 128 aaKnown RBP3.95□□□□□ -1.78
HDAC1-204ENST00000471488 AMN1Q8IY45 258 aa3.95□□□□□ -1.78
HDAC1-204ENST00000471488 CNFNQ9BYD5 112 aa3.95□□□□□ -1.78
HDAC1-204ENST00000471488 KRTAP4-1Q9BYQ7 146 aa3.95□□□□□ -1.78
HDAC1-204ENST00000471488 TRBV30A0A0K0K1B3 111 aa3.94□□□□□ -1.78
HDAC1-204ENST00000471488 ZNF727A8MUV8 499 aa3.94□□□□□ -1.78
HDAC1-204ENST00000471488 TEX46H3BTG2 121 aa3.94□□□□□ -1.78
HDAC1-204ENST00000471488 PDE6DO43924 150 aa3.94□□□□□ -1.78
HDAC1-204ENST00000471488 NPSP0C0P6 89 aa3.94□□□□□ -1.78
HDAC1-204ENST00000471488 SEC61BP60468 96 aaKnown RBP3.94□□□□□ -1.78
HDAC1-204ENST00000471488 C4orf48Q5BLP8 95 aa3.94□□□□□ -1.78
HDAC1-204ENST00000471488 SMIM12Q96EX1 92 aa3.94□□□□□ -1.78
HDAC1-204ENST00000471488 CSDC2Q9Y534 153 aaKnown RBP3.94□□□□□ -1.78
HDAC1-204ENST00000471488 IGHV3OR16-9A0A0B4J2B5 98 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 185.7 ms