RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 RAB5AP20339 215 aa13.12□□□□□ -0.31
SREBF1-210ENST00000471445 PTTG1IPP53801 180 aa13.12□□□□□ -0.31
SREBF1-210ENST00000471445 PRR3P79522 188 aaKnown RBP13.12□□□□□ -0.31
SREBF1-210ENST00000471445 SPAG11BQ08648 103 aa13.12□□□□□ -0.31
SREBF1-210ENST00000471445 LOC107984640A0A0U1RRK4 108 aa13.11□□□□□ -0.31
SREBF1-210ENST00000471445 IFITM10A6NMD0 228 aa13.11□□□□□ -0.31
SREBF1-210ENST00000471445 IFI27P40305 119 aaPredicted RBP13.11□□□□□ -0.31
SREBF1-210ENST00000471445 OR10D4PQ8NGN7 298 aa13.11□□□□□ -0.31
SREBF1-210ENST00000471445 MAP1LC3AQ9H492 121 aa13.1□□□□□ -0.31
SREBF1-210ENST00000471445 PYGO1Q9Y3Y4 419 aa13.1□□□□□ -0.31
SREBF1-210ENST00000471445 ADCYAP1P18509 176 aa13.09□□□□□ -0.31
SREBF1-210ENST00000471445 HMCN2Q8NDA2 5059 aa13.08□□□□□ -0.31
SREBF1-210ENST00000471445 IGLV4-3A0A075B6K6 122 aa13.08□□□□□ -0.32
SREBF1-210ENST00000471445 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-210ENST00000471445 MT1HL1P0DM35 61 aa13.08□□□□□ -0.32
SREBF1-210ENST00000471445 GAGE2BQ13066 116 aa13.08□□□□□ -0.32
SREBF1-210ENST00000471445 SERTAD4-AS1Q5TG53 156 aa13.08□□□□□ -0.32
SREBF1-210ENST00000471445 ORAOV1Q8WV07 137 aa13.08□□□□□ -0.32
SREBF1-210ENST00000471445 LOC389332A0A1B0GUA5 103 aa13.07□□□□□ -0.32
SREBF1-210ENST00000471445 Q8N8P6 123 aa13.07□□□□□ -0.32
SREBF1-210ENST00000471445 RNF151Q2KHN1 245 aa13.06□□□□□ -0.32
SREBF1-210ENST00000471445 UQCC3Q6UW78 93 aa13.06□□□□□ -0.32
SREBF1-210ENST00000471445 TMEM141Q96I45 108 aa13.06□□□□□ -0.32
SREBF1-210ENST00000471445 F8WDY8 70 aa13.05□□□□□ -0.32
SREBF1-210ENST00000471445 IFITM2Q01629 132 aa13.05□□□□□ -0.32
SREBF1-210ENST00000471445 IMMP2LQ96T52 175 aa13.05□□□□□ -0.32
SREBF1-210ENST00000471445 MRPL35Q9NZE8 188 aaKnown RBP13.05□□□□□ -0.32
SREBF1-210ENST00000471445 TGIF2-C20orf24A0A0A6YYL0 155 aa13.04□□□□□ -0.32
SREBF1-210ENST00000471445 LINC00242Q5T6M2 205 aa13.04□□□□□ -0.32
SREBF1-210ENST00000471445 C2orf66Q6UXQ4 117 aa13.04□□□□□ -0.32
SREBF1-210ENST00000471445 CYSLTR1Q9Y271 337 aa13.04□□□□□ -0.32
SREBF1-210ENST00000471445 RPL18AQ02543 176 aaKnown RBP13.03□□□□□ -0.32
SREBF1-210ENST00000471445 A0A087WZ39 114 aa13.02□□□□□ -0.33
SREBF1-210ENST00000471445 A0A0J9YXV3 536 aa13.02□□□□□ -0.33
SREBF1-210ENST00000471445 A0A1W2PNN7 141 aa13.02□□□□□ -0.33
SREBF1-210ENST00000471445 TMEM218A2RU14 115 aa13.02□□□□□ -0.33
SREBF1-210ENST00000471445 K7EMI3 77 aa13.02□□□□□ -0.33
SREBF1-210ENST00000471445 NDUFA1O15239 70 aa13.02□□□□□ -0.33
SREBF1-210ENST00000471445 ORMDL2Q53FV1 153 aa13.02□□□□□ -0.33
SREBF1-210ENST00000471445 TEX43Q6ZNM6 134 aa13.02□□□□□ -0.33
SREBF1-210ENST00000471445 CTDSP1Q9GZU7 261 aa13.02□□□□□ -0.33
SREBF1-210ENST00000471445 UBE2D1P51668 147 aa13.01□□□□□ -0.33
SREBF1-210ENST00000471445 LINC00173Q6ZV60 143 aa13.01□□□□□ -0.33
SREBF1-210ENST00000471445 TNXBP22105 4242 aa13□□□□□ -0.33
SREBF1-210ENST00000471445 C9orf116Q5BN46 136 aaPredicted RBP13□□□□□ -0.33
SREBF1-210ENST00000471445 Q6ZRP5 223 aa13□□□□□ -0.33
SREBF1-210ENST00000471445 NXT2Q9NPJ8 142 aaKnown RBP13□□□□□ -0.33
SREBF1-210ENST00000471445 TRAV9-1A0A075B6T8 112 aa12.99□□□□□ -0.33
SREBF1-210ENST00000471445 NPSP0C0P6 89 aa12.99□□□□□ -0.33
SREBF1-210ENST00000471445 KIAA0087Q14695 138 aa12.99□□□□□ -0.33
SREBF1-210ENST00000471445 C10orf25Q5T742 122 aa12.99□□□□□ -0.33
SREBF1-210ENST00000471445 AMELXQ99217 191 aa12.99□□□□□ -0.33
SREBF1-210ENST00000471445 C2orf88Q9BSF0 95 aa12.99□□□□□ -0.33
SREBF1-210ENST00000471445 C6orf48Q9UBA6 75 aa12.99□□□□□ -0.33
SREBF1-210ENST00000471445 TLX1NBP0CAT3 122 aa12.98□□□□□ -0.33
SREBF1-210ENST00000471445 Q6ZN92 141 aa12.98□□□□□ -0.33
SREBF1-210ENST00000471445 IGIPA6NJ69 53 aa12.97□□□□□ -0.33
SREBF1-210ENST00000471445 ZC2HC1BQ5TFG8 222 aa12.97□□□□□ -0.33
SREBF1-210ENST00000471445 UNQ6190/PRO20217Q6UXQ8 127 aa12.97□□□□□ -0.33
SREBF1-210ENST00000471445 LINC01561Q8N1V8 128 aa12.97□□□□□ -0.33
SREBF1-210ENST00000471445 SEC11CQ9BY50 192 aa12.97□□□□□ -0.33
SREBF1-210ENST00000471445 SPINK6Q6UWN8 80 aa12.96□□□□□ -0.33
SREBF1-210ENST00000471445 UBR4Q5T4S7 5183 aa12.96□□□□□ -0.34
SREBF1-210ENST00000471445 KIAA1644Q3SXP7 199 aa12.95□□□□□ -0.34
SREBF1-210ENST00000471445 FAM19A3Q7Z5A8 133 aa12.95□□□□□ -0.34
SREBF1-210ENST00000471445 PLA2G2DQ9UNK4 145 aa12.95□□□□□ -0.34
SREBF1-210ENST00000471445 SRSF9Q13242 221 aaKnown RBP eCLIP12.94□□□□□ -0.34
SREBF1-210ENST00000471445 LINC01600Q96MT4 127 aa12.94□□□□□ -0.34
SREBF1-210ENST00000471445 VCX2Q9H322 139 aa12.94□□□□□ -0.34
SREBF1-210ENST00000471445 TIMM17AQ99595 171 aa12.93□□□□□ -0.34
SREBF1-210ENST00000471445 TRBV30A0A0K0K1B3 111 aa12.92□□□□□ -0.34
SREBF1-210ENST00000471445 PHF5AQ7RTV0 110 aaKnown RBP12.92□□□□□ -0.34
SREBF1-210ENST00000471445 COMMD7Q86VX2 200 aa12.92□□□□□ -0.34
SREBF1-210ENST00000471445 TOMM6Q96B49 74 aa12.92□□□□□ -0.34
SREBF1-210ENST00000471445 G0S2P27469 103 aa12.91□□□□□ -0.34
SREBF1-210ENST00000471445 PSORS1C2Q9UIG4 136 aa12.91□□□□□ -0.34
SREBF1-210ENST00000471445 S100PP25815 95 aa12.9□□□□□ -0.34
SREBF1-210ENST00000471445 PAPPA-AS1Q5QFB9 102 aa12.9□□□□□ -0.34
SREBF1-210ENST00000471445 C2orf82Q6UX34 121 aa12.9□□□□□ -0.34
SREBF1-210ENST00000471445 GNB1LQ9BYB4 327 aa12.9□□□□□ -0.34
SREBF1-210ENST00000471445 FAM168BA1KXE4 195 aa12.89□□□□□ -0.35
SREBF1-210ENST00000471445 REG3GQ6UW15 175 aa12.89□□□□□ -0.35
SREBF1-210ENST00000471445 GAGE2EQ4V326 116 aa12.88□□□□□ -0.35
SREBF1-210ENST00000471445 C10orf91Q5T1B1 145 aa12.88□□□□□ -0.35
SREBF1-210ENST00000471445 GAGE2DQ9UEU5 116 aa12.88□□□□□ -0.35
SREBF1-210ENST00000471445 LINC01546A6NGU7 62 aa12.87□□□□□ -0.35
SREBF1-210ENST00000471445 NDUFC2-KCTD14E9PQ53 114 aa12.87□□□□□ -0.35
SREBF1-210ENST00000471445 MT-ND6P03923 174 aa12.87□□□□□ -0.35
SREBF1-210ENST00000471445 HERVK_113P63121 156 aa12.87□□□□□ -0.35
SREBF1-210ENST00000471445 SEC11AP67812 179 aa12.87□□□□□ -0.35
SREBF1-210ENST00000471445 PACRGQ96M98 296 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-210ENST00000471445 ALKBH7Q9BT30 221 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-210ENST00000471445 CARHSP1Q9Y2V2 147 aaKnown RBP12.87□□□□□ -0.35
SREBF1-210ENST00000471445 COX19Q49B96 90 aa12.86□□□□□ -0.35
SREBF1-210ENST00000471445 ERASQ7Z444 233 aa12.86□□□□□ -0.35
SREBF1-210ENST00000471445 FAM19A5Q7Z5A7 132 aaPredicted RBP12.86□□□□□ -0.35
SREBF1-210ENST00000471445 KRTAP7-1Q8IUC3 87 aa12.86□□□□□ -0.35
SREBF1-210ENST00000471445 Q8IZM0 81 aa12.86□□□□□ -0.35
SREBF1-210ENST00000471445 RHEBQ15382 184 aa12.85□□□□□ -0.35
SREBF1-210ENST00000471445 CDKN2A-AS1Q9UH64 79 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms