RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 UBE2D1P51668 147 aa12.76□□□□□ -0.37
HDAC7-220ENST00000471235 ERASQ7Z444 233 aa12.76□□□□□ -0.37
HDAC7-220ENST00000471235 SCGB3A1Q96QR1 104 aa12.76□□□□□ -0.37
HDAC7-220ENST00000471235 VCX2Q9H322 139 aa12.76□□□□□ -0.37
HDAC7-220ENST00000471235 A0A096LNJ9 63 aa12.75□□□□□ -0.37
HDAC7-220ENST00000471235 IGHV3OR16-9A0A0B4J2B5 98 aa12.75□□□□□ -0.37
HDAC7-220ENST00000471235 LINC01549A6NIU2 74 aa12.75□□□□□ -0.37
HDAC7-220ENST00000471235 LINC00614P0C842 121 aa12.75□□□□□ -0.37
HDAC7-220ENST00000471235 LINC00242Q5T6M2 205 aa12.75□□□□□ -0.37
HDAC7-220ENST00000471235 KRTAP17-1Q9BYP8 105 aa12.75□□□□□ -0.37
HDAC7-220ENST00000471235 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.74□□□□□ -0.37
HDAC7-220ENST00000471235 COLCA2A8K830 154 aa12.74□□□□□ -0.37
HDAC7-220ENST00000471235 SCO1O75880 301 aa12.74□□□□□ -0.37
HDAC7-220ENST00000471235 PAPPA-AS1Q5QFB9 102 aa12.74□□□□□ -0.37
HDAC7-220ENST00000471235 LINC00526Q96FQ7 95 aa12.74□□□□□ -0.37
HDAC7-220ENST00000471235 TRGC2P03986 189 aa12.73□□□□□ -0.37
HDAC7-220ENST00000471235 RAB5BP61020 215 aa12.72□□□□□ -0.37
HDAC7-220ENST00000471235 COX6A2Q02221 97 aa12.72□□□□□ -0.37
HDAC7-220ENST00000471235 IGHV3-64A0A075B6Q5 118 aa12.71□□□□□ -0.37
HDAC7-220ENST00000471235 APOMO95445 188 aa12.71□□□□□ -0.37
HDAC7-220ENST00000471235 HBDP02042 147 aa12.71□□□□□ -0.37
HDAC7-220ENST00000471235 PMCHL1Q16048 86 aa12.71□□□□□ -0.37
HDAC7-220ENST00000471235 ZNF561-AS1K7EIQ3 104 aa12.7□□□□□ -0.38
HDAC7-220ENST00000471235 FAM19A3Q7Z5A8 133 aa12.7□□□□□ -0.38
HDAC7-220ENST00000471235 IGLV4-69A0A075B6H9 119 aa12.69□□□□□ -0.38
HDAC7-220ENST00000471235 A0A087WZ39 114 aa12.69□□□□□ -0.38
HDAC7-220ENST00000471235 SPAG11BQ08648 103 aa12.69□□□□□ -0.38
HDAC7-220ENST00000471235 SDIM1Q6ZPB5 146 aa12.69□□□□□ -0.38
HDAC7-220ENST00000471235 ORAOV1Q8WV07 137 aa12.69□□□□□ -0.38
HDAC7-220ENST00000471235 SCXQ7RTU7 201 aa12.68□□□□□ -0.38
HDAC7-220ENST00000471235 Q8N1X5 172 aa12.68□□□□□ -0.38
HDAC7-220ENST00000471235 OR10D4PQ8NGN7 298 aa12.68□□□□□ -0.38
HDAC7-220ENST00000471235 CARD19Q96LW7 228 aa12.68□□□□□ -0.38
HDAC7-220ENST00000471235 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-220ENST00000471235 PDZD11Q5EBL8 140 aa12.67□□□□□ -0.38
HDAC7-220ENST00000471235 CHCHD1Q96BP2 118 aaKnown RBP12.67□□□□□ -0.38
HDAC7-220ENST00000471235 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-220ENST00000471235 A0A0J9YXV3 536 aa12.66□□□□□ -0.38
HDAC7-220ENST00000471235 PANO1I0J062 215 aa12.66□□□□□ -0.38
HDAC7-220ENST00000471235 SYCNQ0VAF6 134 aa12.66□□□□□ -0.38
HDAC7-220ENST00000471235 CHAC1Q9BUX1 264 aa12.66□□□□□ -0.38
HDAC7-220ENST00000471235 SEC11AP67812 179 aa12.65□□□□□ -0.38
HDAC7-220ENST00000471235 PMVKQ15126 192 aa12.65□□□□□ -0.38
HDAC7-220ENST00000471235 Q6ZRU5 148 aa12.65□□□□□ -0.38
HDAC7-220ENST00000471235 C2orf48Q96LS8 159 aa12.65□□□□□ -0.38
HDAC7-220ENST00000471235 CST9LQ9H4G1 147 aa12.65□□□□□ -0.38
HDAC7-220ENST00000471235 HERVK_113P63121 156 aa12.64□□□□□ -0.39
HDAC7-220ENST00000471235 BAGE3Q86Y29 109 aa12.64□□□□□ -0.39
HDAC7-220ENST00000471235 LINC01561Q8N1V8 128 aa12.64□□□□□ -0.39
HDAC7-220ENST00000471235 CAMK2N2Q96S95 79 aa12.64□□□□□ -0.39
HDAC7-220ENST00000471235 KRTAP4-5Q9BYR2 181 aa12.64□□□□□ -0.39
HDAC7-220ENST00000471235 SMR3BP02814 79 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-220ENST00000471235 CHTF8P0CG12 524 aa12.63□□□□□ -0.39
HDAC7-220ENST00000471235 CIRBPQ14011 172 aaKnown RBP12.63□□□□□ -0.39
HDAC7-220ENST00000471235 CIRBP-AS1Q8TBR5 109 aa12.63□□□□□ -0.39
HDAC7-220ENST00000471235 GEMIN7Q9H840 131 aaKnown RBP12.63□□□□□ -0.39
HDAC7-220ENST00000471235 LINC00310P59036 64 aa12.62□□□□□ -0.39
HDAC7-220ENST00000471235 CDKN2A-AS1Q9UH64 79 aa12.62□□□□□ -0.39
HDAC7-220ENST00000471235 TINCRA0A1B0GVN0 87 aa12.61□□□□□ -0.39
HDAC7-220ENST00000471235 ATP5LO75964 103 aa12.61□□□□□ -0.39
HDAC7-220ENST00000471235 KIAA0087Q14695 138 aa12.61□□□□□ -0.39
HDAC7-220ENST00000471235 IGLV5-45A0A087WSX0 123 aa12.6□□□□□ -0.39
HDAC7-220ENST00000471235 HSBP1O75506 76 aa12.6□□□□□ -0.39
HDAC7-220ENST00000471235 SERF1AO75920 110 aa12.6□□□□□ -0.39
HDAC7-220ENST00000471235 SPACA4Q8TDM5 124 aa12.6□□□□□ -0.39
HDAC7-220ENST00000471235 A0A096LNI7 61 aa12.59□□□□□ -0.39
HDAC7-220ENST00000471235 F8WDY8 70 aa12.59□□□□□ -0.39
HDAC7-220ENST00000471235 NDUFA6P56556 154 aa12.59□□□□□ -0.39
HDAC7-220ENST00000471235 Q5VSD8 79 aa12.59□□□□□ -0.39
HDAC7-220ENST00000471235 LINC00469Q8N7U9 141 aa12.59□□□□□ -0.39
HDAC7-220ENST00000471235 NDUFA1O15239 70 aa12.58□□□□□ -0.4
HDAC7-220ENST00000471235 FAT1Q14517 4588 aa12.58□□□□□ -0.4
HDAC7-220ENST00000471235 FAM19A2Q8N3H0 131 aa12.58□□□□□ -0.4
HDAC7-220ENST00000471235 PKIGQ9Y2B9 76 aa12.58□□□□□ -0.4
HDAC7-220ENST00000471235 IGKV2-24A0A0C4DH68 120 aa12.57□□□□□ -0.4
HDAC7-220ENST00000471235 EPM2AB3EWF7 344 aa12.57□□□□□ -0.4
HDAC7-220ENST00000471235 IGLC3P0DOY3 106 aa12.57□□□□□ -0.4
HDAC7-220ENST00000471235 C10orf25Q5T742 122 aa12.57□□□□□ -0.4
HDAC7-220ENST00000471235 PACRGQ96M98 296 aaPredicted RBP12.57□□□□□ -0.4
HDAC7-220ENST00000471235 MRPL35Q9NZE8 188 aaKnown RBP12.57□□□□□ -0.4
HDAC7-220ENST00000471235 SMIM1B2RUZ4 78 aa12.56□□□□□ -0.4
HDAC7-220ENST00000471235 ATP6V1G1O75348 118 aa12.56□□□□□ -0.4
HDAC7-220ENST00000471235 LINC00528Q8N1L1 170 aa12.56□□□□□ -0.4
HDAC7-220ENST00000471235 ABCA13Q86UQ4 5058 aa12.56□□□□□ -0.4
HDAC7-220ENST00000471235 LOC107984640A0A0U1RRK4 108 aa12.55□□□□□ -0.4
HDAC7-220ENST00000471235 RNF151Q2KHN1 245 aa12.55□□□□□ -0.4
HDAC7-220ENST00000471235 UNQ6190/PRO20217Q6UXQ8 127 aa12.55□□□□□ -0.4
HDAC7-220ENST00000471235 Q8IZM0 81 aa12.55□□□□□ -0.4
HDAC7-220ENST00000471235 IFI27L1Q96BM0 104 aa12.55□□□□□ -0.4
HDAC7-220ENST00000471235 TOMM7Q9P0U1 55 aa12.55□□□□□ -0.4
HDAC7-220ENST00000471235 C6orf48Q9UBA6 75 aa12.55□□□□□ -0.4
HDAC7-220ENST00000471235 A0A087WYN8 130 aa12.54□□□□□ -0.4
HDAC7-220ENST00000471235 NUPR1O60356 82 aa12.54□□□□□ -0.4
HDAC7-220ENST00000471235 PRSS2P07478 247 aa12.54□□□□□ -0.4
HDAC7-220ENST00000471235 S100A1P23297 94 aa12.54□□□□□ -0.4
HDAC7-220ENST00000471235 MAJINQ3KP22 176 aa12.54□□□□□ -0.4
HDAC7-220ENST00000471235 C2orf82Q6UX34 121 aa12.54□□□□□ -0.4
HDAC7-220ENST00000471235 VPS13BQ7Z7G8 4022 aa12.53□□□□□ -0.4
HDAC7-220ENST00000471235 HIST1H2BKO60814 126 aa12.53□□□□□ -0.4
HDAC7-220ENST00000471235 HIST1H2BJP06899 126 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms