RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 FAT1Q14517 4588 aa9.87□□□□□ -0.83
FDPS-208ENST00000470171 IGLV4-69A0A075B6H9 119 aa9.87□□□□□ -0.83
FDPS-208ENST00000470171 LOC389332A0A1B0GUA5 103 aa9.87□□□□□ -0.83
FDPS-208ENST00000470171 IFITM10A6NMD0 228 aa9.87□□□□□ -0.83
FDPS-208ENST00000470171 RNF151Q2KHN1 245 aa9.87□□□□□ -0.83
FDPS-208ENST00000470171 TEX43Q6ZNM6 134 aa9.87□□□□□ -0.83
FDPS-208ENST00000470171 LINC01561Q8N1V8 128 aa9.87□□□□□ -0.83
FDPS-208ENST00000470171 VPS13BQ7Z7G8 4022 aa9.87□□□□□ -0.83
FDPS-208ENST00000470171 TGIF2-C20orf24A0A0A6YYL0 155 aa9.86□□□□□ -0.83
FDPS-208ENST00000470171 IGHV3OR16-9A0A0B4J2B5 98 aa9.86□□□□□ -0.83
FDPS-208ENST00000470171 SEC11AP67812 179 aa9.86□□□□□ -0.83
FDPS-208ENST00000470171 COX6A2Q02221 97 aa9.86□□□□□ -0.83
FDPS-208ENST00000470171 C2orf66Q6UXQ4 117 aa9.86□□□□□ -0.83
FDPS-208ENST00000470171 PLAC8Q9NZF1 115 aa9.86□□□□□ -0.83
FDPS-208ENST00000470171 RPL37AP61513 92 aaKnown RBP9.85□□□□□ -0.83
FDPS-208ENST00000470171 C7orf33Q8WU49 177 aa9.85□□□□□ -0.83
FDPS-208ENST00000470171 VCX2Q9H322 139 aa9.85□□□□□ -0.83
FDPS-208ENST00000470171 IGLV4-3A0A075B6K6 122 aa9.84□□□□□ -0.83
FDPS-208ENST00000470171 A0A087WYN8 130 aa9.84□□□□□ -0.83
FDPS-208ENST00000470171 RNASE13Q5GAN3 156 aaKnown RBP9.84□□□□□ -0.83
FDPS-208ENST00000470171 CAMK2N2Q96S95 79 aa9.84□□□□□ -0.83
FDPS-208ENST00000470171 TIMM17AQ99595 171 aa9.84□□□□□ -0.83
FDPS-208ENST00000470171 RPS10P5Q9NQ39 176 aa9.84□□□□□ -0.83
FDPS-208ENST00000470171 A0A087WZ39 114 aa9.83□□□□□ -0.84
FDPS-208ENST00000470171 LOC107984640A0A0U1RRK4 108 aa9.83□□□□□ -0.84
FDPS-208ENST00000470171 SNAPINO95295 136 aa9.83□□□□□ -0.84
FDPS-208ENST00000470171 C5orf38Q86SI9 138 aa9.83□□□□□ -0.84
FDPS-208ENST00000470171 SVBPQ8N300 66 aa9.83□□□□□ -0.84
FDPS-208ENST00000470171 PRSS3P2Q8NHM4 247 aa9.83□□□□□ -0.84
FDPS-208ENST00000470171 FAM104AQ969W3 186 aa9.83□□□□□ -0.84
FDPS-208ENST00000470171 LINC01546A6NGU7 62 aa9.81□□□□□ -0.84
FDPS-208ENST00000470171 IGIPA6NJ69 53 aa9.81□□□□□ -0.84
FDPS-208ENST00000470171 SPAG11BQ08648 103 aa9.81□□□□□ -0.84
FDPS-208ENST00000470171 MAJINQ3KP22 176 aa9.81□□□□□ -0.84
FDPS-208ENST00000470171 FAM19A3Q7Z5A8 133 aa9.81□□□□□ -0.84
FDPS-208ENST00000470171 TOMM6Q96B49 74 aa9.81□□□□□ -0.84
FDPS-208ENST00000470171 AMELXQ99217 191 aa9.81□□□□□ -0.84
FDPS-208ENST00000470171 MRPL35Q9NZE8 188 aaKnown RBP9.81□□□□□ -0.84
FDPS-208ENST00000470171 KRTAP29-1A8MX34 341 aaPredicted RBP9.8□□□□□ -0.84
FDPS-208ENST00000470171 PANO1I0J062 215 aa9.8□□□□□ -0.84
FDPS-208ENST00000470171 NDUFA1O15239 70 aa9.8□□□□□ -0.84
FDPS-208ENST00000470171 OXTP01178 125 aa9.8□□□□□ -0.84
FDPS-208ENST00000470171 UBE2D1P51668 147 aa9.8□□□□□ -0.84
FDPS-208ENST00000470171 LINC00242Q5T6M2 205 aa9.8□□□□□ -0.84
FDPS-208ENST00000470171 ERASQ7Z444 233 aa9.8□□□□□ -0.84
FDPS-208ENST00000470171 OPRPNQ99935 248 aaPredicted RBP9.8□□□□□ -0.84
FDPS-208ENST00000470171 ALKBH7Q9BT30 221 aaPredicted RBP9.8□□□□□ -0.84
FDPS-208ENST00000470171 KRTAP10-4P60372 401 aaPredicted RBP9.79□□□□□ -0.84
FDPS-208ENST00000470171 STPG4Q8N801 248 aa9.79□□□□□ -0.84
FDPS-208ENST00000470171 ORAOV1Q8WV07 137 aa9.79□□□□□ -0.84
FDPS-208ENST00000470171 IGKV2-24A0A0C4DH68 120 aa9.78□□□□□ -0.84
FDPS-208ENST00000470171 CHTF8P0CG12 524 aa9.78□□□□□ -0.84
FDPS-208ENST00000470171 PTTG1IPP53801 180 aa9.78□□□□□ -0.84
FDPS-208ENST00000470171 HERVK_113P63121 156 aa9.78□□□□□ -0.84
FDPS-208ENST00000470171 FABP9Q0Z7S8 132 aa9.78□□□□□ -0.84
FDPS-208ENST00000470171 Q6ZRU5 148 aa9.78□□□□□ -0.84
FDPS-208ENST00000470171 MRPL18Q9H0U6 180 aaKnown RBP9.78□□□□□ -0.84
FDPS-208ENST00000470171 A0A096LNI7 61 aa9.77□□□□□ -0.85
FDPS-208ENST00000470171 APOC3P02656 99 aa9.77□□□□□ -0.85
FDPS-208ENST00000470171 KIAA1644Q3SXP7 199 aa9.77□□□□□ -0.85
FDPS-208ENST00000470171 SMCO4Q9NRQ5 59 aa9.77□□□□□ -0.85
FDPS-208ENST00000470171 J3QL48 77 aa9.76□□□□□ -0.85
FDPS-208ENST00000470171 TLX1NBP0CAT3 122 aa9.76□□□□□ -0.85
FDPS-208ENST00000470171 FA2HQ7L5A8 372 aa9.76□□□□□ -0.85
FDPS-208ENST00000470171 LINC00526Q96FQ7 95 aa9.76□□□□□ -0.85
FDPS-208ENST00000470171 SCGB3A1Q96QR1 104 aa9.76□□□□□ -0.85
FDPS-208ENST00000470171 TRBV30A0A0K0K1B3 111 aa9.75□□□□□ -0.85
FDPS-208ENST00000470171 RAB5BP61020 215 aa9.75□□□□□ -0.85
FDPS-208ENST00000470171 GEMIN7Q9H840 131 aaKnown RBP9.75□□□□□ -0.85
FDPS-208ENST00000470171 TRAPPC1Q9Y5R8 145 aa9.74□□□□□ -0.85
FDPS-208ENST00000470171 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.73□□□□□ -0.85
FDPS-208ENST00000470171 PRSS2P07478 247 aa9.73□□□□□ -0.85
FDPS-208ENST00000470171 GAGE2BQ13066 116 aa9.73□□□□□ -0.85
FDPS-208ENST00000470171 LINC00173Q6ZV60 143 aa9.73□□□□□ -0.85
FDPS-208ENST00000470171 PACRGQ96M98 296 aaPredicted RBP9.73□□□□□ -0.85
FDPS-208ENST00000470171 KIAA0087Q14695 138 aa9.72□□□□□ -0.85
FDPS-208ENST00000470171 Q8IZM0 81 aa9.72□□□□□ -0.85
FDPS-208ENST00000470171 DMBT1Q9UGM3 2413 aaPredicted RBP9.72□□□□□ -0.85
FDPS-208ENST00000470171 TINCRA0A1B0GVN0 87 aa9.71□□□□□ -0.86
FDPS-208ENST00000470171 CXCL5P42830 114 aa9.71□□□□□ -0.86
FDPS-208ENST00000470171 ODF1Q14990 250 aa9.71□□□□□ -0.86
FDPS-208ENST00000470171 C6orf226Q5I0X4 101 aa9.71□□□□□ -0.86
FDPS-208ENST00000470171 MYCBP2O75592 4640 aa9.71□□□□□ -0.86
FDPS-208ENST00000470171 LINC00614P0C842 121 aa9.7□□□□□ -0.86
FDPS-208ENST00000470171 CKS1BP61024 79 aa9.7□□□□□ -0.86
FDPS-208ENST00000470171 RPL18AQ02543 176 aaKnown RBP9.7□□□□□ -0.86
FDPS-208ENST00000470171 PMVKQ15126 192 aa9.7□□□□□ -0.86
FDPS-208ENST00000470171 Q6ZRP5 223 aa9.7□□□□□ -0.86
FDPS-208ENST00000470171 NDUFC2-KCTD14E9PQ53 114 aa9.68□□□□□ -0.86
FDPS-208ENST00000470171 PDZD11Q5EBL8 140 aa9.68□□□□□ -0.86
FDPS-208ENST00000470171 UNQ6190/PRO20217Q6UXQ8 127 aa9.68□□□□□ -0.86
FDPS-208ENST00000470171 CST9LQ9H4G1 147 aa9.68□□□□□ -0.86
FDPS-208ENST00000470171 C6orf48Q9UBA6 75 aa9.68□□□□□ -0.86
FDPS-208ENST00000470171 IGLV5-45A0A087WSX0 123 aa9.67□□□□□ -0.86
FDPS-208ENST00000470171 H3BRM9 83 aa9.67□□□□□ -0.86
FDPS-208ENST00000470171 PRR3P79522 188 aaKnown RBP9.67□□□□□ -0.86
FDPS-208ENST00000470171 C18orf32Q8TCD1 76 aa9.67□□□□□ -0.86
FDPS-208ENST00000470171 CDKN2A-AS1Q9UH64 79 aa9.67□□□□□ -0.86
FDPS-208ENST00000470171 ATP5LO75964 103 aa9.66□□□□□ -0.86
FDPS-208ENST00000470171 HBDP02042 147 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms