RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 Q9HAA7 133 aa2.33□□□□□ -2.04
TRIM59-202ENST00000468542 VPS13BQ7Z7G8 4022 aa2.33□□□□□ -2.04
TRIM59-202ENST00000468542 IGLV4-3A0A075B6K6 122 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 IGKV2D-24A0A075B6R9 120 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 GVQW2A0A096LPI5 108 aaPredicted RBP2.32□□□□□ -2.04
TRIM59-202ENST00000468542 LOC389332A0A1B0GUA5 103 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 LINC00959A0A1B0GUT2 108 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 F8WDY8 70 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 LINC00614P0C842 121 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 KRTAP5-9P26371 169 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 CNBPP62633 177 aaKnown RBP2.32□□□□□ -2.04
TRIM59-202ENST00000468542 RPL39P62891 51 aaKnown RBP2.32□□□□□ -2.04
TRIM59-202ENST00000468542 SS18Q15532 418 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 KIAA1644Q3SXP7 199 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 TEX43Q6ZNM6 134 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 FA2HQ7L5A8 372 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 FAM19A3Q7Z5A8 133 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 LINC01561Q8N1V8 128 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 MAPKAPK5-AS1Q8N8E1 139 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 CHCHD10Q8WYQ3 142 aaPredicted RBP2.32□□□□□ -2.04
TRIM59-202ENST00000468542 FAM104AQ969W3 186 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 AMELXQ99217 191 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 C2orf88Q9BSF0 95 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 CDIP1Q9H305 208 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 PKIGQ9Y2B9 76 aa2.32□□□□□ -2.04
TRIM59-202ENST00000468542 A0A087WZ39 114 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 A0A096LNJ9 63 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 IGHV3OR16-9A0A0B4J2B5 98 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 IFITM10A6NMD0 228 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 USP17L23D6RBM5 183 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.31□□□□□ -2.04
TRIM59-202ENST00000468542 ATP6V1G1O75348 118 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 CDK2AP2O75956 126 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 ATP5LO75964 103 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 HBDP02042 147 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 TRGC2P03986 189 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 HERVK_113P63121 156 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 FOXI1Q12951 378 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 PDZD11Q5EBL8 140 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 LINC00242Q5T6M2 205 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 Q6ZUT4 128 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 SPATA12Q7Z6I5 190 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 OR10D4PQ8NGN7 298 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 URB1-AS1Q96HZ7 61 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 PACRGQ96M98 296 aaPredicted RBP2.31□□□□□ -2.04
TRIM59-202ENST00000468542 VCX2Q9H322 139 aa2.31□□□□□ -2.04
TRIM59-202ENST00000468542 SRRM2Q9UQ35 2752 aaKnown RBP2.3□□□□□ -2.04
TRIM59-202ENST00000468542 IGLV10-54A0A075B6I4 117 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 IGLV5-45A0A087WSX0 123 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 IGLV5-52A0A0A0MRZ9 124 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.3□□□□□ -2.04
TRIM59-202ENST00000468542 TRAV13-1A0A0B4J241 112 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 IGHV1-58A0A0C4DH39 117 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 GAGE12HA6NDE8 117 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 C16orf90A8MZG2 172 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 COX7A2LO14548 114 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 HSBP1O75506 76 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 APOMO95445 188 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 XCL1P47992 114 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 UBE2D1P51668 147 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 PMVKQ15126 192 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 COA6Q5JTJ3 125 aaKnown RBP2.3□□□□□ -2.04
TRIM59-202ENST00000468542 CLPSL2Q6UWE3 100 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 Q6ZSA8 131 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 LINC00173Q6ZV60 143 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 DEFB104AQ8WTQ1 72 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 BAALCQ8WXS3 180 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 SCGB3A1Q96QR1 104 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 BIRC6Q9NR09 4857 aa2.3□□□□□ -2.04
TRIM59-202ENST00000468542 FAT1Q14517 4588 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 IGHV3-64A0A075B6Q5 118 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 TRAV12-1A0A0B4J245 112 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 IGKV3OR2-268A0A0C4DH90 116 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 TINCRA0A1B0GVN0 87 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 HIST1H2BKO60814 126 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 SERF1AO75920 110 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 HIST1H2BJP06899 126 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 PRSS1P07477 247 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 IGLC3P0DOY3 106 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 MALP21145 153 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 GCSHP23434 173 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 HIST1H2BOP23527 126 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 HIST1H2BBP33778 126 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 HIST1H2BDP58876 126 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 HIST1H2BCP62807 126 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 CIRBPQ14011 172 aaKnown RBP2.29□□□□□ -2.04
TRIM59-202ENST00000468542 WFDC2Q14508 124 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 ODF1Q14990 250 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 HIST2H2BEQ16778 126 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 RNF151Q2KHN1 245 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.29□□□□□ -2.04
TRIM59-202ENST00000468542 SFTA2Q6UW10 78 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 BAGE3Q86Y29 109 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 C15orf56Q8N910 161 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 C9orf163Q8N9P6 203 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 HIST1H2BHQ93079 126 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 C2orf48Q96LS8 159 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 HIST1H2BNQ99877 126 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 HIST1H2BMQ99879 126 aa2.29□□□□□ -2.04
TRIM59-202ENST00000468542 OPRPNQ99935 248 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms