RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 TINCRA0A1B0GVN0 87 aa13.07□□□□□ -0.32
SNAPC3-205ENST00000467062 MTORP42345 2549 aa13.07□□□□□ -0.32
SNAPC3-205ENST00000467062 FLNAP21333 2647 aaKnown RBP13.06□□□□□ -0.32
SNAPC3-205ENST00000467062 USP17L23D6RBM5 183 aa13.06□□□□□ -0.32
SNAPC3-205ENST00000467062 RBMY1A1P0DJD3 496 aaKnown RBP13.06□□□□□ -0.32
SNAPC3-205ENST00000467062 RBMY1CP0DJD4 496 aa13.06□□□□□ -0.32
SNAPC3-205ENST00000467062 ZNF415Q09FC8 603 aa13.06□□□□□ -0.32
SNAPC3-205ENST00000467062 RBMY1FQ15415 496 aaKnown RBP13.06□□□□□ -0.32
SNAPC3-205ENST00000467062 LINC00308Q8TCZ7 52 aa13.06□□□□□ -0.32
SNAPC3-205ENST00000467062 IGKV3D-7A0A0C4DH55 119 aa13.05□□□□□ -0.32
SNAPC3-205ENST00000467062 NDUFC2O95298 119 aa13.05□□□□□ -0.32
SNAPC3-205ENST00000467062 PRIMA1Q86XR5 153 aa13.05□□□□□ -0.32
SNAPC3-205ENST00000467062 ZNF843Q8N446 348 aa13.05□□□□□ -0.32
SNAPC3-205ENST00000467062 C11orf44Q8N8P7 122 aa13.05□□□□□ -0.32
SNAPC3-205ENST00000467062 A8MZ25 164 aa13.05□□□□□ -0.32
SNAPC3-205ENST00000467062 Q96MF0 132 aa13.05□□□□□ -0.32
SNAPC3-205ENST00000467062 TENM4Q6N022 2769 aa13.04□□□□□ -0.32
SNAPC3-205ENST00000467062 IGHV1OR15-1A0A075B7D0 117 aa13.04□□□□□ -0.32
SNAPC3-205ENST00000467062 J3QLI3 93 aa13.04□□□□□ -0.32
SNAPC3-205ENST00000467062 NDUFA1O15239 70 aa13.04□□□□□ -0.32
SNAPC3-205ENST00000467062 DEFB131AP59861 70 aa13.04□□□□□ -0.32
SNAPC3-205ENST00000467062 UBE2E2Q96LR5 201 aa13.04□□□□□ -0.32
SNAPC3-205ENST00000467062 NACAE9PAV3 2078 aa13.03□□□□□ -0.32
SNAPC3-205ENST00000467062 PROK1P58294 105 aa13.03□□□□□ -0.32
SNAPC3-205ENST00000467062 HIST2H2BCQ6DN03 193 aa13.03□□□□□ -0.32
SNAPC3-205ENST00000467062 C9orf85Q96MD7 179 aa13.03□□□□□ -0.32
SNAPC3-205ENST00000467062 JMJD1CQ15652 2540 aa13.03□□□□□ -0.32
SNAPC3-205ENST00000467062 F8WDY8 70 aa13.02□□□□□ -0.32
SNAPC3-205ENST00000467062 RS1O15537 224 aa13.02□□□□□ -0.32
SNAPC3-205ENST00000467062 PFN2P35080 140 aa13.02□□□□□ -0.32
SNAPC3-205ENST00000467062 Q9UF83 564 aa13.02□□□□□ -0.32
SNAPC3-205ENST00000467062 CR1P17927 2039 aa13.02□□□□□ -0.33
SNAPC3-205ENST00000467062 LINC01561Q8N1V8 128 aa13.01□□□□□ -0.33
SNAPC3-205ENST00000467062 FSHBP01225 129 aa13.01□□□□□ -0.33
SNAPC3-205ENST00000467062 Q8N2B8 174 aa13.01□□□□□ -0.33
SNAPC3-205ENST00000467062 A0A087WVE0 104 aa13□□□□□ -0.33
SNAPC3-205ENST00000467062 FAM104AQ969W3 186 aa13□□□□□ -0.33
SNAPC3-205ENST00000467062 DEFB113Q30KQ7 82 aa13□□□□□ -0.33
SNAPC3-205ENST00000467062 FHL2Q14192 279 aa12.99□□□□□ -0.33
SNAPC3-205ENST00000467062 FAM218AQ96MZ4 157 aa12.99□□□□□ -0.33
SNAPC3-205ENST00000467062 C2CD3Q4AC94 2353 aa12.99□□□□□ -0.33
SNAPC3-205ENST00000467062 TMEM89A2RUT3 159 aa12.99□□□□□ -0.33
SNAPC3-205ENST00000467062 OVOL2Q9BRP0 275 aa12.99□□□□□ -0.33
SNAPC3-205ENST00000467062 ITPR2Q14571 2701 aa12.98□□□□□ -0.33
SNAPC3-205ENST00000467062 RBMY1BA6NDE4 496 aaKnown RBP12.98□□□□□ -0.33
SNAPC3-205ENST00000467062 RBMY1EA6NEQ0 496 aaKnown RBP12.98□□□□□ -0.33
SNAPC3-205ENST00000467062 RBMY1DP0C7P1 496 aaKnown RBP12.98□□□□□ -0.33
SNAPC3-205ENST00000467062 RNASE13Q5GAN3 156 aaKnown RBP12.97□□□□□ -0.33
SNAPC3-205ENST00000467062 LINC00846Q9NV44 126 aa12.97□□□□□ -0.33
SNAPC3-205ENST00000467062 C1orf43Q9BWL3 253 aa12.97□□□□□ -0.33
SNAPC3-205ENST00000467062 A0A1W2PRX2 142 aa12.96□□□□□ -0.33
SNAPC3-205ENST00000467062 Q9HAA7 133 aa12.96□□□□□ -0.33
SNAPC3-205ENST00000467062 TMEM243Q9BU79 118 aa12.95□□□□□ -0.34
SNAPC3-205ENST00000467062 UBE2D4Q9Y2X8 147 aa12.95□□□□□ -0.34
SNAPC3-205ENST00000467062 LINC00336Q6ZUF6 198 aa12.95□□□□□ -0.34
SNAPC3-205ENST00000467062 WFDC11Q8NEX6 87 aa12.95□□□□□ -0.34
SNAPC3-205ENST00000467062 C14orf132Q9NPU4 83 aa12.95□□□□□ -0.34
SNAPC3-205ENST00000467062 FAM236DA0A1B0GTK5 79 aa12.94□□□□□ -0.34
SNAPC3-205ENST00000467062 FAM236CP0DP71 79 aa12.94□□□□□ -0.34
SNAPC3-205ENST00000467062 Q9H8V8 135 aa12.94□□□□□ -0.34
SNAPC3-205ENST00000467062 SERP1Q9Y6X1 66 aa12.94□□□□□ -0.34
SNAPC3-205ENST00000467062 CDKN2A-AS1Q9UH64 79 aa12.93□□□□□ -0.34
SNAPC3-205ENST00000467062 EPM2AB3EWF7 344 aa12.92□□□□□ -0.34
SNAPC3-205ENST00000467062 PF4P02776 101 aa12.92□□□□□ -0.34
SNAPC3-205ENST00000467062 SOSTDC1Q6X4U4 206 aa12.92□□□□□ -0.34
SNAPC3-205ENST00000467062 Q6ZSN1 163 aa12.92□□□□□ -0.34
SNAPC3-205ENST00000467062 KRTAP1-3Q8IUG1 177 aa12.92□□□□□ -0.34
SNAPC3-205ENST00000467062 RPL28P46779 137 aaKnown RBP12.92□□□□□ -0.34
SNAPC3-205ENST00000467062 OBSCN-AS1Q96MR7 158 aa12.92□□□□□ -0.34
SNAPC3-205ENST00000467062 SETXQ7Z333 2677 aaKnown RBP12.92□□□□□ -0.34
SNAPC3-205ENST00000467062 A0A0U1RRA0 63 aa12.91□□□□□ -0.34
SNAPC3-205ENST00000467062 GHRHP01286 108 aa12.91□□□□□ -0.34
SNAPC3-205ENST00000467062 IGHV3OR16-12A0A075B7B8 117 aa12.91□□□□□ -0.34
SNAPC3-205ENST00000467062 DYNLRB2Q8TF09 96 aa12.91□□□□□ -0.34
SNAPC3-205ENST00000467062 IGLV5-45A0A087WSX0 123 aa12.9□□□□□ -0.34
SNAPC3-205ENST00000467062 TRAV13-2A0A0B4J235 113 aa12.9□□□□□ -0.34
SNAPC3-205ENST00000467062 S100A7L2Q5SY68 101 aa12.9□□□□□ -0.34
SNAPC3-205ENST00000467062 ZNF625Q96I27 306 aaPredicted RBP12.9□□□□□ -0.34
SNAPC3-205ENST00000467062 MAP6D1Q9H9H5 199 aa12.89□□□□□ -0.35
SNAPC3-205ENST00000467062 XCL2Q9UBD3 114 aa12.89□□□□□ -0.35
SNAPC3-205ENST00000467062 IGHV3-38A0A0C4DH36 116 aa12.88□□□□□ -0.35
SNAPC3-205ENST00000467062 HELZ2Q9BYK8 2649 aaKnown RBP12.88□□□□□ -0.35
SNAPC3-205ENST00000467062 IGLV5-39A0A0G2JS06 123 aa12.87□□□□□ -0.35
SNAPC3-205ENST00000467062 ATP5EP2Q5VTU8 51 aa12.87□□□□□ -0.35
SNAPC3-205ENST00000467062 NOTCH2Q04721 2471 aa12.87□□□□□ -0.35
SNAPC3-205ENST00000467062 RPL35AP18077 110 aaKnown RBP12.87□□□□□ -0.35
SNAPC3-205ENST00000467062 DEFB114Q30KQ6 69 aa12.87□□□□□ -0.35
SNAPC3-205ENST00000467062 C4orf3Q8WVX3 66 aa12.87□□□□□ -0.35
SNAPC3-205ENST00000467062 C9orf129Q5T035 196 aaKnown RBP12.86□□□□□ -0.35
SNAPC3-205ENST00000467062 C20orf197Q8N268 126 aa12.86□□□□□ -0.35
SNAPC3-205ENST00000467062 CRPP02741 224 aa12.86□□□□□ -0.35
SNAPC3-205ENST00000467062 CHCHD7Q9BUK0 85 aa12.86□□□□□ -0.35
SNAPC3-205ENST00000467062 XCL1P47992 114 aa12.85□□□□□ -0.35
SNAPC3-205ENST00000467062 ESM1Q9NQ30 184 aa12.85□□□□□ -0.35
SNAPC3-205ENST00000467062 H0YGX0 51 aa12.84□□□□□ -0.35
SNAPC3-205ENST00000467062 PKIGQ9Y2B9 76 aa12.84□□□□□ -0.35
SNAPC3-205ENST00000467062 TMEM86BQ8N661 226 aa12.84□□□□□ -0.35
SNAPC3-205ENST00000467062 PDZD2O15018 2839 aa12.84□□□□□ -0.35
SNAPC3-205ENST00000467062 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.83□□□□□ -0.35
SNAPC3-205ENST00000467062 IGKV2-29A2NJV5 120 aaPredicted RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 380.3 ms