RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 IGHV3OR16-9A0A0B4J2B5 98 aa6.1□□□□□ -1.43
SDCCAG3-208ENST00000466579 LINC00173Q6ZV60 143 aa6.1□□□□□ -1.43
SDCCAG3-208ENST00000466579 TOMM6Q96B49 74 aa6.1□□□□□ -1.43
SDCCAG3-208ENST00000466579 TMEM141Q96I45 108 aa6.1□□□□□ -1.43
SDCCAG3-208ENST00000466579 TIMM17AQ99595 171 aa6.1□□□□□ -1.43
SDCCAG3-208ENST00000466579 KRTAP4-5Q9BYR2 181 aa6.1□□□□□ -1.43
SDCCAG3-208ENST00000466579 AP5S1Q9NUS5 200 aa6.1□□□□□ -1.43
SDCCAG3-208ENST00000466579 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.09□□□□□ -1.43
SDCCAG3-208ENST00000466579 LINC01549A6NIU2 74 aa6.09□□□□□ -1.43
SDCCAG3-208ENST00000466579 IFITM10A6NMD0 228 aa6.09□□□□□ -1.43
SDCCAG3-208ENST00000466579 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.09□□□□□ -1.43
SDCCAG3-208ENST00000466579 COX7A2LO14548 114 aa6.09□□□□□ -1.43
SDCCAG3-208ENST00000466579 CIRBPQ14011 172 aaKnown RBP6.09□□□□□ -1.43
SDCCAG3-208ENST00000466579 FAM19A3Q7Z5A8 133 aa6.09□□□□□ -1.43
SDCCAG3-208ENST00000466579 PRSS3P2Q8NHM4 247 aa6.09□□□□□ -1.43
SDCCAG3-208ENST00000466579 CHAC1Q9BUX1 264 aa6.09□□□□□ -1.43
SDCCAG3-208ENST00000466579 SMCO4Q9NRQ5 59 aa6.09□□□□□ -1.43
SDCCAG3-208ENST00000466579 TRAPPC1Q9Y5R8 145 aa6.09□□□□□ -1.43
SDCCAG3-208ENST00000466579 IGHV3-64A0A075B6Q5 118 aa6.08□□□□□ -1.44
SDCCAG3-208ENST00000466579 UBE2D1P51668 147 aa6.08□□□□□ -1.44
SDCCAG3-208ENST00000466579 HIGD2BQ4VC39 106 aa6.08□□□□□ -1.44
SDCCAG3-208ENST00000466579 LINC00242Q5T6M2 205 aa6.08□□□□□ -1.44
SDCCAG3-208ENST00000466579 C18orf32Q8TCD1 76 aa6.08□□□□□ -1.44
SDCCAG3-208ENST00000466579 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
SDCCAG3-208ENST00000466579 PAPPA-AS1Q5QFB9 102 aa6.07□□□□□ -1.44
SDCCAG3-208ENST00000466579 TEX43Q6ZNM6 134 aa6.07□□□□□ -1.44
SDCCAG3-208ENST00000466579 SCXQ7RTU7 201 aa6.07□□□□□ -1.44
SDCCAG3-208ENST00000466579 ERASQ7Z444 233 aa6.07□□□□□ -1.44
SDCCAG3-208ENST00000466579 CBLN2Q8IUK8 224 aa6.07□□□□□ -1.44
SDCCAG3-208ENST00000466579 LINC01561Q8N1V8 128 aa6.07□□□□□ -1.44
SDCCAG3-208ENST00000466579 URB1-AS1Q96HZ7 61 aa6.07□□□□□ -1.44
SDCCAG3-208ENST00000466579 A0A087WZ39 114 aa6.06□□□□□ -1.44
SDCCAG3-208ENST00000466579 F8WDY8 70 aa6.06□□□□□ -1.44
SDCCAG3-208ENST00000466579 APOMO95445 188 aa6.06□□□□□ -1.44
SDCCAG3-208ENST00000466579 MALP21145 153 aa6.06□□□□□ -1.44
SDCCAG3-208ENST00000466579 HAMPP81172 84 aa6.06□□□□□ -1.44
SDCCAG3-208ENST00000466579 Q6ZN92 141 aa6.06□□□□□ -1.44
SDCCAG3-208ENST00000466579 FA2HQ7L5A8 372 aa6.06□□□□□ -1.44
SDCCAG3-208ENST00000466579 C5orf38Q86SI9 138 aa6.06□□□□□ -1.44
SDCCAG3-208ENST00000466579 OR10D4PQ8NGN7 298 aa6.06□□□□□ -1.44
SDCCAG3-208ENST00000466579 CIRBP-AS1Q8TBR5 109 aa6.06□□□□□ -1.44
SDCCAG3-208ENST00000466579 C2orf48Q96LS8 159 aa6.06□□□□□ -1.44
SDCCAG3-208ENST00000466579 C2orf88Q9BSF0 95 aa6.06□□□□□ -1.44
SDCCAG3-208ENST00000466579 VCX2Q9H322 139 aa6.06□□□□□ -1.44
SDCCAG3-208ENST00000466579 A0A096LNJ9 63 aa6.05□□□□□ -1.44
SDCCAG3-208ENST00000466579 EPM2AB3EWF7 344 aa6.05□□□□□ -1.44
SDCCAG3-208ENST00000466579 PANO1I0J062 215 aa6.05□□□□□ -1.44
SDCCAG3-208ENST00000466579 ZNF561-AS1K7EIQ3 104 aa6.05□□□□□ -1.44
SDCCAG3-208ENST00000466579 LINC00614P0C842 121 aa6.05□□□□□ -1.44
SDCCAG3-208ENST00000466579 COX6A2Q02221 97 aa6.05□□□□□ -1.44
SDCCAG3-208ENST00000466579 ZC2HC1BQ5TFG8 222 aa6.05□□□□□ -1.44
SDCCAG3-208ENST00000466579 SCGB3A1Q96QR1 104 aa6.05□□□□□ -1.44
SDCCAG3-208ENST00000466579 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.05□□□□□ -1.44
SDCCAG3-208ENST00000466579 IGLV4-69A0A075B6H9 119 aa6.04□□□□□ -1.44
SDCCAG3-208ENST00000466579 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
SDCCAG3-208ENST00000466579 SMR3BP02814 79 aaPredicted RBP6.04□□□□□ -1.44
SDCCAG3-208ENST00000466579 SYCNQ0VAF6 134 aa6.04□□□□□ -1.44
SDCCAG3-208ENST00000466579 RNF151Q2KHN1 245 aa6.04□□□□□ -1.44
SDCCAG3-208ENST00000466579 Q5VSD8 79 aa6.04□□□□□ -1.44
SDCCAG3-208ENST00000466579 SPACA4Q8TDM5 124 aa6.04□□□□□ -1.44
SDCCAG3-208ENST00000466579 LINC00526Q96FQ7 95 aa6.04□□□□□ -1.44
SDCCAG3-208ENST00000466579 CARD19Q96LW7 228 aa6.04□□□□□ -1.44
SDCCAG3-208ENST00000466579 COLCA2A8K830 154 aa6.03□□□□□ -1.44
SDCCAG3-208ENST00000466579 RAB5BP61020 215 aa6.03□□□□□ -1.44
SDCCAG3-208ENST00000466579 SEC11AP67812 179 aa6.03□□□□□ -1.44
SDCCAG3-208ENST00000466579 SPAG11BQ08648 103 aa6.03□□□□□ -1.44
SDCCAG3-208ENST00000466579 KIAA0087Q14695 138 aa6.03□□□□□ -1.44
SDCCAG3-208ENST00000466579 PDZD11Q5EBL8 140 aa6.03□□□□□ -1.44
SDCCAG3-208ENST00000466579 PKIGQ9Y2B9 76 aa6.03□□□□□ -1.44
SDCCAG3-208ENST00000466579 IGLV5-45A0A087WSX0 123 aa6.02□□□□□ -1.45
SDCCAG3-208ENST00000466579 FAM229AH3BQW9 127 aa6.02□□□□□ -1.45
SDCCAG3-208ENST00000466579 HBDP02042 147 aa6.02□□□□□ -1.45
SDCCAG3-208ENST00000466579 KRTAP10-4P60372 401 aaPredicted RBP6.02□□□□□ -1.45
SDCCAG3-208ENST00000466579 HERVK_113P63121 156 aa6.02□□□□□ -1.45
SDCCAG3-208ENST00000466579 Q6ZRU5 148 aa6.02□□□□□ -1.45
SDCCAG3-208ENST00000466579 ORAOV1Q8WV07 137 aa6.02□□□□□ -1.45
SDCCAG3-208ENST00000466579 CST9LQ9H4G1 147 aa6.02□□□□□ -1.45
SDCCAG3-208ENST00000466579 MRPL35Q9NZE8 188 aaKnown RBP6.02□□□□□ -1.45
SDCCAG3-208ENST00000466579 PLAC8Q9NZF1 115 aa6.02□□□□□ -1.45
SDCCAG3-208ENST00000466579 SRRM2Q9UQ35 2752 aaKnown RBP6.01□□□□□ -1.45
SDCCAG3-208ENST00000466579 PKHD1L1Q86WI1 4243 aa6.01□□□□□ -1.45
SDCCAG3-208ENST00000466579 TINCRA0A1B0GVN0 87 aa6.01□□□□□ -1.45
SDCCAG3-208ENST00000466579 CHTF8P0CG12 524 aa6.01□□□□□ -1.45
SDCCAG3-208ENST00000466579 PMVKQ15126 192 aa6.01□□□□□ -1.45
SDCCAG3-208ENST00000466579 CHCHD1Q96BP2 118 aaKnown RBP6.01□□□□□ -1.45
SDCCAG3-208ENST00000466579 CAMK2N2Q96S95 79 aa6.01□□□□□ -1.45
SDCCAG3-208ENST00000466579 A0A087WYN8 130 aa6□□□□□ -1.45
SDCCAG3-208ENST00000466579 A0A096LNI7 61 aa6□□□□□ -1.45
SDCCAG3-208ENST00000466579 A0A0J9YXV3 536 aa6□□□□□ -1.45
SDCCAG3-208ENST00000466579 LOC107984640A0A0U1RRK4 108 aa6□□□□□ -1.45
SDCCAG3-208ENST00000466579 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6□□□□□ -1.45
SDCCAG3-208ENST00000466579 TRGC2P03986 189 aa6□□□□□ -1.45
SDCCAG3-208ENST00000466579 LINC00474Q9P2X8 69 aa6□□□□□ -1.45
SDCCAG3-208ENST00000466579 CDKN2A-AS1Q9UH64 79 aa6□□□□□ -1.45
SDCCAG3-208ENST00000466579 NDUFA1O15239 70 aa5.99□□□□□ -1.45
SDCCAG3-208ENST00000466579 ATP5LO75964 103 aa5.99□□□□□ -1.45
SDCCAG3-208ENST00000466579 PLA2G1BP04054 148 aaKnown RBP5.99□□□□□ -1.45
SDCCAG3-208ENST00000466579 TLX1NBP0CAT3 122 aa5.99□□□□□ -1.45
SDCCAG3-208ENST00000466579 PTTG1IPP53801 180 aa5.99□□□□□ -1.45
SDCCAG3-208ENST00000466579 C10orf25Q5T742 122 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms