RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 Q8N8P6 123 aa6.5□□□□□ -1.37
CD40-204ENST00000466205 SMCO4Q9NRQ5 59 aa6.5□□□□□ -1.37
CD40-204ENST00000466205 SPANXA1Q9NS26 97 aa6.5□□□□□ -1.37
CD40-204ENST00000466205 LAMTOR2Q9Y2Q5 125 aa6.5□□□□□ -1.37
CD40-204ENST00000466205 IGLV4-69A0A075B6H9 119 aa6.49□□□□□ -1.37
CD40-204ENST00000466205 IGLV4-3A0A075B6K6 122 aa6.49□□□□□ -1.37
CD40-204ENST00000466205 TGIF2-C20orf24A0A0A6YYL0 155 aa6.49□□□□□ -1.37
CD40-204ENST00000466205 PRSS47A8MTI9 375 aa6.49□□□□□ -1.37
CD40-204ENST00000466205 J3QL48 77 aa6.49□□□□□ -1.37
CD40-204ENST00000466205 MAJINQ3KP22 176 aa6.49□□□□□ -1.37
CD40-204ENST00000466205 C2orf66Q6UXQ4 117 aa6.49□□□□□ -1.37
CD40-204ENST00000466205 CARD19Q96LW7 228 aa6.49□□□□□ -1.37
CD40-204ENST00000466205 A0A087WYN8 130 aa6.48□□□□□ -1.37
CD40-204ENST00000466205 A0A096LNI7 61 aa6.48□□□□□ -1.37
CD40-204ENST00000466205 RPL37AP61513 92 aaKnown RBP6.48□□□□□ -1.37
CD40-204ENST00000466205 MRPS36P82909 103 aaKnown RBP6.48□□□□□ -1.37
CD40-204ENST00000466205 SPAG11BQ08648 103 aa6.48□□□□□ -1.37
CD40-204ENST00000466205 SPACA4Q8TDM5 124 aa6.48□□□□□ -1.37
CD40-204ENST00000466205 CAMK2N2Q96S95 79 aa6.48□□□□□ -1.37
CD40-204ENST00000466205 MYCBP2O75592 4640 aa6.48□□□□□ -1.37
CD40-204ENST00000466205 TRAV9-1A0A075B6T8 112 aa6.47□□□□□ -1.37
CD40-204ENST00000466205 SYCNQ0VAF6 134 aa6.47□□□□□ -1.37
CD40-204ENST00000466205 ORMDL2Q53FV1 153 aa6.47□□□□□ -1.37
CD40-204ENST00000466205 Q6ZRU5 148 aa6.47□□□□□ -1.37
CD40-204ENST00000466205 ORAOV1Q8WV07 137 aa6.47□□□□□ -1.37
CD40-204ENST00000466205 MRPL18Q9H0U6 180 aaKnown RBP6.47□□□□□ -1.37
CD40-204ENST00000466205 CYSLTR1Q9Y271 337 aa6.47□□□□□ -1.37
CD40-204ENST00000466205 VPS13BQ7Z7G8 4022 aa6.46□□□□□ -1.37
CD40-204ENST00000466205 A0A0J9YXV3 536 aa6.46□□□□□ -1.38
CD40-204ENST00000466205 APOMO95445 188 aa6.46□□□□□ -1.38
CD40-204ENST00000466205 KRTAP10-4P60372 401 aaPredicted RBP6.46□□□□□ -1.38
CD40-204ENST00000466205 GAGE2BQ13066 116 aa6.46□□□□□ -1.38
CD40-204ENST00000466205 TEX43Q6ZNM6 134 aa6.46□□□□□ -1.38
CD40-204ENST00000466205 STPG4Q8N801 248 aa6.46□□□□□ -1.38
CD40-204ENST00000466205 TMEM141Q96I45 108 aa6.46□□□□□ -1.38
CD40-204ENST00000466205 NXT2Q9NPJ8 142 aaKnown RBP6.46□□□□□ -1.38
CD40-204ENST00000466205 PYGO1Q9Y3Y4 419 aa6.46□□□□□ -1.38
CD40-204ENST00000466205 IGHV3OR16-9A0A0B4J2B5 98 aa6.45□□□□□ -1.38
CD40-204ENST00000466205 FABP9Q0Z7S8 132 aa6.45□□□□□ -1.38
CD40-204ENST00000466205 CIRBPQ14011 172 aaKnown RBP6.45□□□□□ -1.38
CD40-204ENST00000466205 LINC00242Q5T6M2 205 aa6.45□□□□□ -1.38
CD40-204ENST00000466205 Q6ZN92 141 aa6.45□□□□□ -1.38
CD40-204ENST00000466205 C2orf88Q9BSF0 95 aa6.45□□□□□ -1.38
CD40-204ENST00000466205 ALKBH7Q9BT30 221 aaPredicted RBP6.45□□□□□ -1.38
CD40-204ENST00000466205 GNB1LQ9BYB4 327 aa6.45□□□□□ -1.38
CD40-204ENST00000466205 UBE2D1P51668 147 aa6.44□□□□□ -1.38
CD40-204ENST00000466205 HNRNPA3P51991 378 aaKnown RBP6.44□□□□□ -1.38
CD40-204ENST00000466205 LINC00173Q6ZV60 143 aa6.44□□□□□ -1.38
CD40-204ENST00000466205 VCX2Q9H322 139 aa6.44□□□□□ -1.38
CD40-204ENST00000466205 IGIPA6NJ69 53 aa6.43□□□□□ -1.38
CD40-204ENST00000466205 RPL18AQ02543 176 aaKnown RBP6.43□□□□□ -1.38
CD40-204ENST00000466205 TRAPPC1Q9Y5R8 145 aa6.43□□□□□ -1.38
CD40-204ENST00000466205 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.42□□□□□ -1.38
CD40-204ENST00000466205 K7EMI3 77 aa6.42□□□□□ -1.38
CD40-204ENST00000466205 C10orf25Q5T742 122 aa6.42□□□□□ -1.38
CD40-204ENST00000466205 FA2HQ7L5A8 372 aa6.42□□□□□ -1.38
CD40-204ENST00000466205 OR10D4PQ8NGN7 298 aa6.42□□□□□ -1.38
CD40-204ENST00000466205 TOMM6Q96B49 74 aa6.42□□□□□ -1.38
CD40-204ENST00000466205 SCGB3A1Q96QR1 104 aa6.42□□□□□ -1.38
CD40-204ENST00000466205 AMELXQ99217 191 aa6.42□□□□□ -1.38
CD40-204ENST00000466205 PLAC8Q9NZF1 115 aa6.42□□□□□ -1.38
CD40-204ENST00000466205 LOC107984640A0A0U1RRK4 108 aa6.41□□□□□ -1.38
CD40-204ENST00000466205 MT-ND6P03923 174 aa6.41□□□□□ -1.38
CD40-204ENST00000466205 PTTG1IPP53801 180 aa6.41□□□□□ -1.38
CD40-204ENST00000466205 COX19Q49B96 90 aa6.41□□□□□ -1.38
CD40-204ENST00000466205 UNQ6190/PRO20217Q6UXQ8 127 aa6.41□□□□□ -1.38
CD40-204ENST00000466205 C7orf33Q8WU49 177 aa6.41□□□□□ -1.38
CD40-204ENST00000466205 C2orf48Q96LS8 159 aa6.41□□□□□ -1.38
CD40-204ENST00000466205 TOMM7Q9P0U1 55 aa6.41□□□□□ -1.38
CD40-204ENST00000466205 A0A087WZ39 114 aa6.4□□□□□ -1.38
CD40-204ENST00000466205 NDUFA1O15239 70 aa6.4□□□□□ -1.38
CD40-204ENST00000466205 TRGC2P03986 189 aa6.4□□□□□ -1.38
CD40-204ENST00000466205 C2orf82Q6UX34 121 aa6.4□□□□□ -1.38
CD40-204ENST00000466205 LRP1Q07954 4544 aaKnown RBP6.4□□□□□ -1.39
CD40-204ENST00000466205 FAT3Q8TDW7 4589 aa6.4□□□□□ -1.39
CD40-204ENST00000466205 A0A1W2PNN7 141 aa6.39□□□□□ -1.39
CD40-204ENST00000466205 G0S2P27469 103 aa6.39□□□□□ -1.39
CD40-204ENST00000466205 PMCHL1Q16048 86 aa6.39□□□□□ -1.39
CD40-204ENST00000466205 ERASQ7Z444 233 aa6.39□□□□□ -1.39
CD40-204ENST00000466205 URB1-AS1Q96HZ7 61 aa6.39□□□□□ -1.39
CD40-204ENST00000466205 TIMM17AQ99595 171 aa6.39□□□□□ -1.39
CD40-204ENST00000466205 LINC00474Q9P2X8 69 aa6.39□□□□□ -1.39
CD40-204ENST00000466205 C6orf48Q9UBA6 75 aa6.39□□□□□ -1.39
CD40-204ENST00000466205 PKIGQ9Y2B9 76 aa6.39□□□□□ -1.39
CD40-204ENST00000466205 PRSS2P07478 247 aa6.38□□□□□ -1.39
CD40-204ENST00000466205 KIAA0087Q14695 138 aa6.38□□□□□ -1.39
CD40-204ENST00000466205 GAGE2EQ4V326 116 aa6.38□□□□□ -1.39
CD40-204ENST00000466205 C9orf116Q5BN46 136 aaPredicted RBP6.38□□□□□ -1.39
CD40-204ENST00000466205 C18orf32Q8TCD1 76 aa6.38□□□□□ -1.39
CD40-204ENST00000466205 PACRGQ96M98 296 aaPredicted RBP6.38□□□□□ -1.39
CD40-204ENST00000466205 GEMIN7Q9H840 131 aaKnown RBP6.38□□□□□ -1.39
CD40-204ENST00000466205 MRPL35Q9NZE8 188 aaKnown RBP6.38□□□□□ -1.39
CD40-204ENST00000466205 GAGE2DQ9UEU5 116 aa6.38□□□□□ -1.39
CD40-204ENST00000466205 CDKN2A-AS1Q9UH64 79 aa6.38□□□□□ -1.39
CD40-204ENST00000466205 FAM168BA1KXE4 195 aa6.37□□□□□ -1.39
CD40-204ENST00000466205 LINC01546A6NGU7 62 aa6.37□□□□□ -1.39
CD40-204ENST00000466205 NPSP0C0P6 89 aa6.37□□□□□ -1.39
CD40-204ENST00000466205 HERVK_113P63121 156 aa6.37□□□□□ -1.39
CD40-204ENST00000466205 PAPPA-AS1Q5QFB9 102 aa6.37□□□□□ -1.39
CD40-204ENST00000466205 Q6ZRP5 223 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms