RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 A0A096LNI7 61 aa13.76□□□□□ -0.21
LIME1-203ENST00000465591 OPRPNQ99935 248 aaPredicted RBP13.76□□□□□ -0.21
LIME1-203ENST00000465591 SMAGPQ0VAQ4 97 aa13.75□□□□□ -0.21
LIME1-203ENST00000465591 FABP9Q0Z7S8 132 aa13.75□□□□□ -0.21
LIME1-203ENST00000465591 MAJINQ3KP22 176 aa13.75□□□□□ -0.21
LIME1-203ENST00000465591 TMEM18Q96B42 140 aa13.75□□□□□ -0.21
LIME1-203ENST00000465591 MRPL18Q9H0U6 180 aaKnown RBP13.75□□□□□ -0.21
LIME1-203ENST00000465591 PRSS47A8MTI9 375 aa13.74□□□□□ -0.21
LIME1-203ENST00000465591 KIAA1644Q3SXP7 199 aa13.74□□□□□ -0.21
LIME1-203ENST00000465591 CARD19Q96LW7 228 aa13.74□□□□□ -0.21
LIME1-203ENST00000465591 COX7A2LO14548 114 aa13.73□□□□□ -0.21
LIME1-203ENST00000465591 RAB5AP20339 215 aa13.73□□□□□ -0.21
LIME1-203ENST00000465591 C5orf38Q86SI9 138 aa13.73□□□□□ -0.21
LIME1-203ENST00000465591 CBLN2Q8IUK8 224 aa13.73□□□□□ -0.21
LIME1-203ENST00000465591 TRAPPC1Q9Y5R8 145 aa13.73□□□□□ -0.21
LIME1-203ENST00000465591 LOC389332A0A1B0GUA5 103 aa13.72□□□□□ -0.21
LIME1-203ENST00000465591 ZNF561-AS1K7EIQ3 104 aa13.72□□□□□ -0.21
LIME1-203ENST00000465591 SYCNQ0VAF6 134 aa13.72□□□□□ -0.21
LIME1-203ENST00000465591 YPEL4Q96NS1 127 aa13.72□□□□□ -0.21
LIME1-203ENST00000465591 IGLV4-69A0A075B6H9 119 aa13.71□□□□□ -0.21
LIME1-203ENST00000465591 MALP21145 153 aa13.71□□□□□ -0.21
LIME1-203ENST00000465591 SPANXA1Q9NS26 97 aa13.71□□□□□ -0.21
LIME1-203ENST00000465591 STPG4Q8N801 248 aa13.7□□□□□ -0.22
LIME1-203ENST00000465591 OXTP01178 125 aa13.69□□□□□ -0.22
LIME1-203ENST00000465591 MRPS36P82909 103 aaKnown RBP13.69□□□□□ -0.22
LIME1-203ENST00000465591 Q6ZRU5 148 aa13.69□□□□□ -0.22
LIME1-203ENST00000465591 Q8N8P6 123 aa13.69□□□□□ -0.22
LIME1-203ENST00000465591 ALKBH7Q9BT30 221 aaPredicted RBP13.69□□□□□ -0.22
LIME1-203ENST00000465591 NXT2Q9NPJ8 142 aaKnown RBP13.69□□□□□ -0.22
LIME1-203ENST00000465591 K7EMI3 77 aa13.67□□□□□ -0.22
LIME1-203ENST00000465591 IGHV3OR16-9A0A0B4J2B5 98 aa13.65□□□□□ -0.22
LIME1-203ENST00000465591 ORMDL2Q53FV1 153 aa13.65□□□□□ -0.22
LIME1-203ENST00000465591 IFITM10A6NMD0 228 aa13.64□□□□□ -0.23
LIME1-203ENST00000465591 IFI27P40305 119 aaPredicted RBP13.64□□□□□ -0.23
LIME1-203ENST00000465591 SPAG11BQ08648 103 aa13.64□□□□□ -0.23
LIME1-203ENST00000465591 CAMK2N2Q96S95 79 aa13.64□□□□□ -0.23
LIME1-203ENST00000465591 IGLV4-3A0A075B6K6 122 aa13.63□□□□□ -0.23
LIME1-203ENST00000465591 G0S2P27469 103 aa13.63□□□□□ -0.23
LIME1-203ENST00000465591 C7orf33Q8WU49 177 aa13.63□□□□□ -0.23
LIME1-203ENST00000465591 C2orf48Q96LS8 159 aa13.63□□□□□ -0.23
LIME1-203ENST00000465591 PYGO1Q9Y3Y4 419 aa13.63□□□□□ -0.23
LIME1-203ENST00000465591 APOMO95445 188 aa13.62□□□□□ -0.23
LIME1-203ENST00000465591 S100A1P23297 94 aa13.62□□□□□ -0.23
LIME1-203ENST00000465591 PTTG1IPP53801 180 aa13.62□□□□□ -0.23
LIME1-203ENST00000465591 LINC00474Q9P2X8 69 aa13.62□□□□□ -0.23
LIME1-203ENST00000465591 LOC107984640A0A0U1RRK4 108 aa13.61□□□□□ -0.23
LIME1-203ENST00000465591 GAGE2BQ13066 116 aa13.61□□□□□ -0.23
LIME1-203ENST00000465591 PKIGQ9Y2B9 76 aa13.61□□□□□ -0.23
LIME1-203ENST00000465591 A0A0J9YXV3 536 aa13.6□□□□□ -0.23
LIME1-203ENST00000465591 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.6□□□□□ -0.23
LIME1-203ENST00000465591 ZC2HC1BQ5TFG8 222 aa13.6□□□□□ -0.23
LIME1-203ENST00000465591 ORAOV1Q8WV07 137 aa13.6□□□□□ -0.23
LIME1-203ENST00000465591 COLCA2A8K830 154 aa13.59□□□□□ -0.23
LIME1-203ENST00000465591 PRR3P79522 188 aaKnown RBP13.59□□□□□ -0.23
LIME1-203ENST00000465591 FA2HQ7L5A8 372 aa13.59□□□□□ -0.23
LIME1-203ENST00000465591 OR10D4PQ8NGN7 298 aa13.59□□□□□ -0.23
LIME1-203ENST00000465591 CYSLTR1Q9Y271 337 aa13.59□□□□□ -0.23
LIME1-203ENST00000465591 SCO1O75880 301 aa13.58□□□□□ -0.24
LIME1-203ENST00000465591 LINC00242Q5T6M2 205 aa13.58□□□□□ -0.24
LIME1-203ENST00000465591 C2orf66Q6UXQ4 117 aa13.58□□□□□ -0.24
LIME1-203ENST00000465591 TMEM141Q96I45 108 aa13.58□□□□□ -0.24
LIME1-203ENST00000465591 A0A1W2PNN7 141 aa13.57□□□□□ -0.24
LIME1-203ENST00000465591 MT1HL1P0DM35 61 aa13.57□□□□□ -0.24
LIME1-203ENST00000465591 LINC00173Q6ZV60 143 aa13.57□□□□□ -0.24
LIME1-203ENST00000465591 C18orf32Q8TCD1 76 aa13.57□□□□□ -0.24
LIME1-203ENST00000465591 ATP6V1G1O75348 118 aa13.56□□□□□ -0.24
LIME1-203ENST00000465591 RAB5BP61020 215 aa13.56□□□□□ -0.24
LIME1-203ENST00000465591 C10orf25Q5T742 122 aa13.56□□□□□ -0.24
LIME1-203ENST00000465591 LINC01546A6NGU7 62 aa13.55□□□□□ -0.24
LIME1-203ENST00000465591 TRGC2P03986 189 aa13.55□□□□□ -0.24
LIME1-203ENST00000465591 UBE2D1P51668 147 aa13.55□□□□□ -0.24
LIME1-203ENST00000465591 HMCN2Q8NDA2 5059 aa13.55□□□□□ -0.24
LIME1-203ENST00000465591 A0A087WZ39 114 aa13.54□□□□□ -0.24
LIME1-203ENST00000465591 LINC01549A6NIU2 74 aa13.54□□□□□ -0.24
LIME1-203ENST00000465591 RPL18AQ02543 176 aaKnown RBP13.54□□□□□ -0.24
LIME1-203ENST00000465591 RNF151Q2KHN1 245 aa13.54□□□□□ -0.24
LIME1-203ENST00000465591 MRPL35Q9NZE8 188 aaKnown RBP13.54□□□□□ -0.24
LIME1-203ENST00000465591 IGIPA6NJ69 53 aa13.53□□□□□ -0.24
LIME1-203ENST00000465591 LINC00614P0C842 121 aa13.53□□□□□ -0.24
LIME1-203ENST00000465591 KIAA0087Q14695 138 aa13.53□□□□□ -0.24
LIME1-203ENST00000465591 UNQ6190/PRO20217Q6UXQ8 127 aa13.53□□□□□ -0.24
LIME1-203ENST00000465591 TEX43Q6ZNM6 134 aa13.53□□□□□ -0.24
LIME1-203ENST00000465591 AMELXQ99217 191 aa13.53□□□□□ -0.24
LIME1-203ENST00000465591 C9orf116Q5BN46 136 aaPredicted RBP13.52□□□□□ -0.25
LIME1-203ENST00000465591 C6orf48Q9UBA6 75 aa13.52□□□□□ -0.25
LIME1-203ENST00000465591 NDUFA1O15239 70 aa13.51□□□□□ -0.25
LIME1-203ENST00000465591 NPSP0C0P6 89 aa13.51□□□□□ -0.25
LIME1-203ENST00000465591 TOMM6Q96B49 74 aa13.51□□□□□ -0.25
LIME1-203ENST00000465591 TNXBP22105 4242 aa13.51□□□□□ -0.25
LIME1-203ENST00000465591 F8WDY8 70 aa13.5□□□□□ -0.25
LIME1-203ENST00000465591 Q6ZN92 141 aa13.5□□□□□ -0.25
LIME1-203ENST00000465591 PAPPA-AS1Q5QFB9 102 aa13.49□□□□□ -0.25
LIME1-203ENST00000465591 C2orf88Q9BSF0 95 aa13.49□□□□□ -0.25
LIME1-203ENST00000465591 VCX2Q9H322 139 aa13.49□□□□□ -0.25
LIME1-203ENST00000465591 SERTAD4-AS1Q5TG53 156 aa13.48□□□□□ -0.25
LIME1-203ENST00000465591 Q6ZRP5 223 aa13.48□□□□□ -0.25
LIME1-203ENST00000465591 SCGB3A1Q96QR1 104 aa13.48□□□□□ -0.25
LIME1-203ENST00000465591 C2orf82Q6UX34 121 aa13.47□□□□□ -0.25
LIME1-203ENST00000465591 ERASQ7Z444 233 aa13.47□□□□□ -0.25
LIME1-203ENST00000465591 BAGE3Q86Y29 109 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms