RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 A0A096LNI7 61 aa13.76□□□□□ -0.21
LIME1-203ENST00000465591 OPRPNQ99935 248 aaPredicted RBP13.76□□□□□ -0.21
LIME1-203ENST00000465591 SMAGPQ0VAQ4 97 aa13.75□□□□□ -0.21
LIME1-203ENST00000465591 FABP9Q0Z7S8 132 aa13.75□□□□□ -0.21
LIME1-203ENST00000465591 MAJINQ3KP22 176 aa13.75□□□□□ -0.21
LIME1-203ENST00000465591 TMEM18Q96B42 140 aa13.75□□□□□ -0.21
LIME1-203ENST00000465591 MRPL18Q9H0U6 180 aaKnown RBP13.75□□□□□ -0.21
LIME1-203ENST00000465591 PRSS47A8MTI9 375 aa13.74□□□□□ -0.21
LIME1-203ENST00000465591 KIAA1644Q3SXP7 199 aa13.74□□□□□ -0.21
LIME1-203ENST00000465591 CARD19Q96LW7 228 aa13.74□□□□□ -0.21
LIME1-203ENST00000465591 COX7A2LO14548 114 aa13.73□□□□□ -0.21
LIME1-203ENST00000465591 RAB5AP20339 215 aa13.73□□□□□ -0.21
LIME1-203ENST00000465591 C5orf38Q86SI9 138 aa13.73□□□□□ -0.21
LIME1-203ENST00000465591 CBLN2Q8IUK8 224 aa13.73□□□□□ -0.21
LIME1-203ENST00000465591 TRAPPC1Q9Y5R8 145 aa13.73□□□□□ -0.21
LIME1-203ENST00000465591 LOC389332A0A1B0GUA5 103 aa13.72□□□□□ -0.21
LIME1-203ENST00000465591 ZNF561-AS1K7EIQ3 104 aa13.72□□□□□ -0.21
LIME1-203ENST00000465591 SYCNQ0VAF6 134 aa13.72□□□□□ -0.21
LIME1-203ENST00000465591 YPEL4Q96NS1 127 aa13.72□□□□□ -0.21
LIME1-203ENST00000465591 IGLV4-69A0A075B6H9 119 aa13.71□□□□□ -0.21
LIME1-203ENST00000465591 MALP21145 153 aa13.71□□□□□ -0.21
LIME1-203ENST00000465591 SPANXA1Q9NS26 97 aa13.71□□□□□ -0.21
LIME1-203ENST00000465591 STPG4Q8N801 248 aa13.7□□□□□ -0.22
LIME1-203ENST00000465591 OXTP01178 125 aa13.69□□□□□ -0.22
LIME1-203ENST00000465591 MRPS36P82909 103 aaKnown RBP13.69□□□□□ -0.22
LIME1-203ENST00000465591 Q6ZRU5 148 aa13.69□□□□□ -0.22
LIME1-203ENST00000465591 Q8N8P6 123 aa13.69□□□□□ -0.22
LIME1-203ENST00000465591 ALKBH7Q9BT30 221 aaPredicted RBP13.69□□□□□ -0.22
LIME1-203ENST00000465591 NXT2Q9NPJ8 142 aaKnown RBP13.69□□□□□ -0.22
LIME1-203ENST00000465591 K7EMI3 77 aa13.67□□□□□ -0.22
LIME1-203ENST00000465591 IGHV3OR16-9A0A0B4J2B5 98 aa13.65□□□□□ -0.22
LIME1-203ENST00000465591 ORMDL2Q53FV1 153 aa13.65□□□□□ -0.22
LIME1-203ENST00000465591 IFITM10A6NMD0 228 aa13.64□□□□□ -0.23
LIME1-203ENST00000465591 IFI27P40305 119 aaPredicted RBP13.64□□□□□ -0.23
LIME1-203ENST00000465591 SPAG11BQ08648 103 aa13.64□□□□□ -0.23
LIME1-203ENST00000465591 CAMK2N2Q96S95 79 aa13.64□□□□□ -0.23
LIME1-203ENST00000465591 IGLV4-3A0A075B6K6 122 aa13.63□□□□□ -0.23
LIME1-203ENST00000465591 G0S2P27469 103 aa13.63□□□□□ -0.23
LIME1-203ENST00000465591 C7orf33Q8WU49 177 aa13.63□□□□□ -0.23
LIME1-203ENST00000465591 C2orf48Q96LS8 159 aa13.63□□□□□ -0.23
LIME1-203ENST00000465591 PYGO1Q9Y3Y4 419 aa13.63□□□□□ -0.23
LIME1-203ENST00000465591 APOMO95445 188 aa13.62□□□□□ -0.23
LIME1-203ENST00000465591 S100A1P23297 94 aa13.62□□□□□ -0.23
LIME1-203ENST00000465591 PTTG1IPP53801 180 aa13.62□□□□□ -0.23
LIME1-203ENST00000465591 LINC00474Q9P2X8 69 aa13.62□□□□□ -0.23
LIME1-203ENST00000465591 LOC107984640A0A0U1RRK4 108 aa13.61□□□□□ -0.23
LIME1-203ENST00000465591 GAGE2BQ13066 116 aa13.61□□□□□ -0.23
LIME1-203ENST00000465591 PKIGQ9Y2B9 76 aa13.61□□□□□ -0.23
LIME1-203ENST00000465591 A0A0J9YXV3 536 aa13.6□□□□□ -0.23
LIME1-203ENST00000465591 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.6□□□□□ -0.23
LIME1-203ENST00000465591 ZC2HC1BQ5TFG8 222 aa13.6□□□□□ -0.23
LIME1-203ENST00000465591 ORAOV1Q8WV07 137 aa13.6□□□□□ -0.23
LIME1-203ENST00000465591 COLCA2A8K830 154 aa13.59□□□□□ -0.23
LIME1-203ENST00000465591 PRR3P79522 188 aaKnown RBP13.59□□□□□ -0.23
LIME1-203ENST00000465591 FA2HQ7L5A8 372 aa13.59□□□□□ -0.23
LIME1-203ENST00000465591 OR10D4PQ8NGN7 298 aa13.59□□□□□ -0.23
LIME1-203ENST00000465591 CYSLTR1Q9Y271 337 aa13.59□□□□□ -0.23
LIME1-203ENST00000465591 SCO1O75880 301 aa13.58□□□□□ -0.24
LIME1-203ENST00000465591 LINC00242Q5T6M2 205 aa13.58□□□□□ -0.24
LIME1-203ENST00000465591 C2orf66Q6UXQ4 117 aa13.58□□□□□ -0.24
LIME1-203ENST00000465591 TMEM141Q96I45 108 aa13.58□□□□□ -0.24
LIME1-203ENST00000465591 A0A1W2PNN7 141 aa13.57□□□□□ -0.24
LIME1-203ENST00000465591 MT1HL1P0DM35 61 aa13.57□□□□□ -0.24
LIME1-203ENST00000465591 LINC00173Q6ZV60 143 aa13.57□□□□□ -0.24
LIME1-203ENST00000465591 C18orf32Q8TCD1 76 aa13.57□□□□□ -0.24
LIME1-203ENST00000465591 ATP6V1G1O75348 118 aa13.56□□□□□ -0.24
LIME1-203ENST00000465591 RAB5BP61020 215 aa13.56□□□□□ -0.24
LIME1-203ENST00000465591 C10orf25Q5T742 122 aa13.56□□□□□ -0.24
LIME1-203ENST00000465591 LINC01546A6NGU7 62 aa13.55□□□□□ -0.24
LIME1-203ENST00000465591 TRGC2P03986 189 aa13.55□□□□□ -0.24
LIME1-203ENST00000465591 UBE2D1P51668 147 aa13.55□□□□□ -0.24
LIME1-203ENST00000465591 HMCN2Q8NDA2 5059 aa13.55□□□□□ -0.24
LIME1-203ENST00000465591 A0A087WZ39 114 aa13.54□□□□□ -0.24
LIME1-203ENST00000465591 LINC01549A6NIU2 74 aa13.54□□□□□ -0.24
LIME1-203ENST00000465591 RPL18AQ02543 176 aaKnown RBP13.54□□□□□ -0.24
LIME1-203ENST00000465591 RNF151Q2KHN1 245 aa13.54□□□□□ -0.24
LIME1-203ENST00000465591 MRPL35Q9NZE8 188 aaKnown RBP13.54□□□□□ -0.24
LIME1-203ENST00000465591 IGIPA6NJ69 53 aa13.53□□□□□ -0.24
LIME1-203ENST00000465591 LINC00614P0C842 121 aa13.53□□□□□ -0.24
LIME1-203ENST00000465591 KIAA0087Q14695 138 aa13.53□□□□□ -0.24
LIME1-203ENST00000465591 UNQ6190/PRO20217Q6UXQ8 127 aa13.53□□□□□ -0.24
LIME1-203ENST00000465591 TEX43Q6ZNM6 134 aa13.53□□□□□ -0.24
LIME1-203ENST00000465591 AMELXQ99217 191 aa13.53□□□□□ -0.24
LIME1-203ENST00000465591 C9orf116Q5BN46 136 aaPredicted RBP13.52□□□□□ -0.25
LIME1-203ENST00000465591 C6orf48Q9UBA6 75 aa13.52□□□□□ -0.25
LIME1-203ENST00000465591 NDUFA1O15239 70 aa13.51□□□□□ -0.25
LIME1-203ENST00000465591 NPSP0C0P6 89 aa13.51□□□□□ -0.25
LIME1-203ENST00000465591 TOMM6Q96B49 74 aa13.51□□□□□ -0.25
LIME1-203ENST00000465591 TNXBP22105 4242 aa13.51□□□□□ -0.25
LIME1-203ENST00000465591 F8WDY8 70 aa13.5□□□□□ -0.25
LIME1-203ENST00000465591 Q6ZN92 141 aa13.5□□□□□ -0.25
LIME1-203ENST00000465591 PAPPA-AS1Q5QFB9 102 aa13.49□□□□□ -0.25
LIME1-203ENST00000465591 C2orf88Q9BSF0 95 aa13.49□□□□□ -0.25
LIME1-203ENST00000465591 VCX2Q9H322 139 aa13.49□□□□□ -0.25
LIME1-203ENST00000465591 SERTAD4-AS1Q5TG53 156 aa13.48□□□□□ -0.25
LIME1-203ENST00000465591 Q6ZRP5 223 aa13.48□□□□□ -0.25
LIME1-203ENST00000465591 SCGB3A1Q96QR1 104 aa13.48□□□□□ -0.25
LIME1-203ENST00000465591 C2orf82Q6UX34 121 aa13.47□□□□□ -0.25
LIME1-203ENST00000465591 ERASQ7Z444 233 aa13.47□□□□□ -0.25
LIME1-203ENST00000465591 BAGE3Q86Y29 109 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms