RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 SPAG11BQ08648 103 aa16.2■□□□□ 0.18
U2AF1-206ENST00000464750 MT-ND4LP03901 98 aa16.19■□□□□ 0.18
U2AF1-206ENST00000464750 RAB5AP20339 215 aa16.19■□□□□ 0.18
U2AF1-206ENST00000464750 PTTG1IPP53801 180 aa16.19■□□□□ 0.18
U2AF1-206ENST00000464750 ANAPC16Q96DE5 110 aa16.19■□□□□ 0.18
U2AF1-206ENST00000464750 C2orf48Q96LS8 159 aa16.19■□□□□ 0.18
U2AF1-206ENST00000464750 IFITM10A6NMD0 228 aa16.18■□□□□ 0.18
U2AF1-206ENST00000464750 GAGE2BQ13066 116 aa16.18■□□□□ 0.18
U2AF1-206ENST00000464750 MT1HL1P0DM35 61 aa16.16■□□□□ 0.18
U2AF1-206ENST00000464750 IFI27P40305 119 aaPredicted RBP16.16■□□□□ 0.18
U2AF1-206ENST00000464750 OR10D4PQ8NGN7 298 aa16.16■□□□□ 0.18
U2AF1-206ENST00000464750 IGHV3OR16-9A0A0B4J2B5 98 aa16.15■□□□□ 0.18
U2AF1-206ENST00000464750 ORAOV1Q8WV07 137 aa16.15■□□□□ 0.18
U2AF1-206ENST00000464750 LAMTOR2Q9Y2Q5 125 aa16.15■□□□□ 0.18
U2AF1-206ENST00000464750 MAP1LC3AQ9H492 121 aa16.14■□□□□ 0.17
U2AF1-206ENST00000464750 LOC389332A0A1B0GUA5 103 aa16.13■□□□□ 0.17
U2AF1-206ENST00000464750 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.13■□□□□ 0.17
U2AF1-206ENST00000464750 PRSS47A8MTI9 375 aa16.12■□□□□ 0.17
U2AF1-206ENST00000464750 RPL18AQ02543 176 aaKnown RBP16.12■□□□□ 0.17
U2AF1-206ENST00000464750 PYGO1Q9Y3Y4 419 aa16.12■□□□□ 0.17
U2AF1-206ENST00000464750 IGLV4-3A0A075B6K6 122 aa16.11■□□□□ 0.17
U2AF1-206ENST00000464750 CLLU1Q5K131 121 aa16.11■□□□□ 0.17
U2AF1-206ENST00000464750 A0A0J9YXV3 536 aa16.1■□□□□ 0.17
U2AF1-206ENST00000464750 TGIF2-C20orf24A0A0A6YYL0 155 aa16.09■□□□□ 0.17
U2AF1-206ENST00000464750 RNF151Q2KHN1 245 aa16.09■□□□□ 0.17
U2AF1-206ENST00000464750 PLA2G2DQ9UNK4 145 aa16.09■□□□□ 0.17
U2AF1-206ENST00000464750 A0A1W2PNN7 141 aa16.08■□□□□ 0.16
U2AF1-206ENST00000464750 Q8N8P6 123 aa16.08■□□□□ 0.16
U2AF1-206ENST00000464750 TMEM141Q96I45 108 aa16.08■□□□□ 0.16
U2AF1-206ENST00000464750 MRPL35Q9NZE8 188 aaKnown RBP16.08■□□□□ 0.16
U2AF1-206ENST00000464750 TNXBP22105 4242 aa16.08■□□□□ 0.16
U2AF1-206ENST00000464750 F8WDY8 70 aa16.06■□□□□ 0.16
U2AF1-206ENST00000464750 NDUFA1O15239 70 aa16.06■□□□□ 0.16
U2AF1-206ENST00000464750 Q6ZRP5 223 aa16.06■□□□□ 0.16
U2AF1-206ENST00000464750 C9orf116Q5BN46 136 aaPredicted RBP16.05■□□□□ 0.16
U2AF1-206ENST00000464750 LINC00242Q5T6M2 205 aa16.05■□□□□ 0.16
U2AF1-206ENST00000464750 C2orf66Q6UXQ4 117 aa16.05■□□□□ 0.16
U2AF1-206ENST00000464750 TEX43Q6ZNM6 134 aa16.05■□□□□ 0.16
U2AF1-206ENST00000464750 CYSLTR1Q9Y271 337 aa16.05■□□□□ 0.16
U2AF1-206ENST00000464750 A0A087WZ39 114 aa16.04■□□□□ 0.16
U2AF1-206ENST00000464750 ADCYAP1P18509 176 aa16.04■□□□□ 0.16
U2AF1-206ENST00000464750 ORMDL2Q53FV1 153 aa16.03■□□□□ 0.16
U2AF1-206ENST00000464750 C10orf25Q5T742 122 aa16.03■□□□□ 0.16
U2AF1-206ENST00000464750 C2orf88Q9BSF0 95 aa16.03■□□□□ 0.16
U2AF1-206ENST00000464750 CTDSP1Q9GZU7 261 aa16.03■□□□□ 0.16
U2AF1-206ENST00000464750 SPINK6Q6UWN8 80 aa16.02■□□□□ 0.16
U2AF1-206ENST00000464750 IMMP2LQ96T52 175 aa16.02■□□□□ 0.16
U2AF1-206ENST00000464750 UBE2D1P51668 147 aa16.01■□□□□ 0.15
U2AF1-206ENST00000464750 UNQ6190/PRO20217Q6UXQ8 127 aa16.01■□□□□ 0.15
U2AF1-206ENST00000464750 Q6ZN92 141 aa16.01■□□□□ 0.15
U2AF1-206ENST00000464750 C6orf48Q9UBA6 75 aa16.01■□□□□ 0.15
U2AF1-206ENST00000464750 K7EMI3 77 aa16■□□□□ 0.15
U2AF1-206ENST00000464750 ZC2HC1BQ5TFG8 222 aa16■□□□□ 0.15
U2AF1-206ENST00000464750 UQCC3Q6UW78 93 aa16■□□□□ 0.15
U2AF1-206ENST00000464750 LINC01600Q96MT4 127 aa16■□□□□ 0.15
U2AF1-206ENST00000464750 NXT2Q9NPJ8 142 aaKnown RBP16■□□□□ 0.15
U2AF1-206ENST00000464750 KIAA0087Q14695 138 aa15.99■□□□□ 0.15
U2AF1-206ENST00000464750 LINC00173Q6ZV60 143 aa15.99■□□□□ 0.15
U2AF1-206ENST00000464750 TMEM218A2RU14 115 aa15.98■□□□□ 0.15
U2AF1-206ENST00000464750 PHF5AQ7RTV0 110 aaKnown RBP15.98■□□□□ 0.15
U2AF1-206ENST00000464750 AMELXQ99217 191 aa15.98■□□□□ 0.15
U2AF1-206ENST00000464750 TLX1NBP0CAT3 122 aa15.97■□□□□ 0.15
U2AF1-206ENST00000464750 IFITM2Q01629 132 aa15.97■□□□□ 0.15
U2AF1-206ENST00000464750 VCX2Q9H322 139 aa15.97■□□□□ 0.15
U2AF1-206ENST00000464750 NPSP0C0P6 89 aa15.96■□□□□ 0.15
U2AF1-206ENST00000464750 SRSF9Q13242 221 aaKnown RBP eCLIP15.96■□□□□ 0.15
U2AF1-206ENST00000464750 REG3GQ6UW15 175 aa15.96■□□□□ 0.15
U2AF1-206ENST00000464750 IGIPA6NJ69 53 aa15.95■□□□□ 0.14
U2AF1-206ENST00000464750 MT-ND6P03923 174 aa15.95■□□□□ 0.14
U2AF1-206ENST00000464750 KIAA1644Q3SXP7 199 aa15.95■□□□□ 0.14
U2AF1-206ENST00000464750 LINC01561Q8N1V8 128 aa15.95■□□□□ 0.14
U2AF1-206ENST00000464750 PSORS1C2Q9UIG4 136 aa15.95■□□□□ 0.14
U2AF1-206ENST00000464750 UBR4Q5T4S7 5183 aa15.95■□□□□ 0.14
U2AF1-206ENST00000464750 TRAV9-1A0A075B6T8 112 aa15.93■□□□□ 0.14
U2AF1-206ENST00000464750 FAM168BA1KXE4 195 aa15.93■□□□□ 0.14
U2AF1-206ENST00000464750 GAGE2EQ4V326 116 aa15.93■□□□□ 0.14
U2AF1-206ENST00000464750 C2orf82Q6UX34 121 aa15.93■□□□□ 0.14
U2AF1-206ENST00000464750 GAGE2DQ9UEU5 116 aa15.93■□□□□ 0.14
U2AF1-206ENST00000464750 TRBV30A0A0K0K1B3 111 aa15.91■□□□□ 0.14
U2AF1-206ENST00000464750 FAM19A5Q7Z5A7 132 aaPredicted RBP15.9■□□□□ 0.14
U2AF1-206ENST00000464750 PACRGQ96M98 296 aaPredicted RBP15.9■□□□□ 0.14
U2AF1-206ENST00000464750 SEC11CQ9BY50 192 aa15.9■□□□□ 0.14
U2AF1-206ENST00000464750 G0S2P27469 103 aa15.89■□□□□ 0.13
U2AF1-206ENST00000464750 C1orf137Q5JT78 98 aa15.89■□□□□ 0.13
U2AF1-206ENST00000464750 PAPPA-AS1Q5QFB9 102 aa15.89■□□□□ 0.13
U2AF1-206ENST00000464750 FAM19A3Q7Z5A8 133 aa15.89■□□□□ 0.13
U2AF1-206ENST00000464750 TOMM6Q96B49 74 aa15.89■□□□□ 0.13
U2AF1-206ENST00000464750 TIMM17AQ99595 171 aa15.89■□□□□ 0.13
U2AF1-206ENST00000464750 PRSS2P07478 247 aa15.88■□□□□ 0.13
U2AF1-206ENST00000464750 S100PP25815 95 aa15.88■□□□□ 0.13
U2AF1-206ENST00000464750 TOMM7Q9P0U1 55 aa15.88■□□□□ 0.13
U2AF1-206ENST00000464750 NDUFC2-KCTD14E9PQ53 114 aa15.86■□□□□ 0.13
U2AF1-206ENST00000464750 COMMD7Q86VX2 200 aa15.86■□□□□ 0.13
U2AF1-206ENST00000464750 HERVK_113P63121 156 aa15.85■□□□□ 0.13
U2AF1-206ENST00000464750 SEC11AP67812 179 aa15.85■□□□□ 0.13
U2AF1-206ENST00000464750 GNB1LQ9BYB4 327 aa15.85■□□□□ 0.13
U2AF1-206ENST00000464750 KRTAP10-8P60410 259 aa15.84■□□□□ 0.13
U2AF1-206ENST00000464750 ODF1Q14990 250 aa15.84■□□□□ 0.13
U2AF1-206ENST00000464750 GEMIN7Q9H840 131 aaKnown RBP15.84■□□□□ 0.13
U2AF1-206ENST00000464750 M0QXV9 152 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms