RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 UBE2L3P68036 154 aaKnown RBP-0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 PIGYQ3MUY2 71 aa-0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 C9orf153Q5TBE3 101 aa-0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 Q5VSD8 79 aa-0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 DPH3P1Q9H4G8 78 aa-0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 CDC42SE2Q9NRR3 84 aa-0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 UQCR10Q9UDW1 63 aa-0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 RAPGEF6Q8TEU7 1601 aa-0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 SPTA1P02549 2419 aa-0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 MAPKBP1O60336 1514 aa-0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 FAM135AQ9P2D6 1515 aa-0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 MGPP08493 103 aa-0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 GNG11P61952 73 aa-0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 FAM167A-AS1Q96KT0 104 aa-0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 FAIMQ9NVQ4 179 aa-0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 SONP18583 2426 aaKnown RBP-0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 DCHS2Q6V1P9 2916 aa-0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 TET3O43151 1660 aa-0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 NRKQ7Z2Y5 1582 aa-0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 DIP2CQ9Y2E4 1556 aa-0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 STAB1Q9NY15 2570 aa-0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 HMGXB3Q12766 1538 aa-0.03□□□□□ -2.41
TM9SF3-203ENST00000464654 SHANK2Q9UPX8 1470 aa-0.03□□□□□ -2.41
TM9SF3-203ENST00000464654 TCHHQ07283 1943 aa-0.03□□□□□ -2.41
TM9SF3-203ENST00000464654 F6UZH7 168 aa-0.03□□□□□ -2.41
TM9SF3-203ENST00000464654 SPRR1AP35321 89 aa-0.03□□□□□ -2.41
TM9SF3-203ENST00000464654 UBA52P62987 128 aaKnown RBP-0.03□□□□□ -2.41
TM9SF3-203ENST00000464654 WHAMMP3Q1A5X7 153 aa-0.03□□□□□ -2.41
TM9SF3-203ENST00000464654 SVBPQ8N300 66 aa-0.03□□□□□ -2.41
TM9SF3-203ENST00000464654 TMEM203Q969S6 136 aa-0.03□□□□□ -2.41
TM9SF3-203ENST00000464654 SPRR4Q96PI1 79 aa-0.03□□□□□ -2.41
TM9SF3-203ENST00000464654 NXT2Q9NPJ8 142 aaKnown RBP-0.03□□□□□ -2.41
TM9SF3-203ENST00000464654 PZPP20742 1482 aa-0.03□□□□□ -2.41
TM9SF3-203ENST00000464654 SPHKAPQ2M3C7 1700 aa-0.04□□□□□ -2.42
TM9SF3-203ENST00000464654 UBE2D3P61077 147 aa-0.04□□□□□ -2.42
TM9SF3-203ENST00000464654 UBE2D2P62837 147 aa-0.04□□□□□ -2.42
TM9SF3-203ENST00000464654 PPP3R1P63098 170 aa-0.04□□□□□ -2.42
TM9SF3-203ENST00000464654 FDCSPQ8NFU4 85 aa-0.04□□□□□ -2.42
TM9SF3-203ENST00000464654 TMEM263Q8WUH6 116 aaKnown RBP-0.04□□□□□ -2.42
TM9SF3-203ENST00000464654 MANBALQ9NQG1 85 aa-0.04□□□□□ -2.42
TM9SF3-203ENST00000464654 GNG8Q9UK08 70 aa-0.04□□□□□ -2.42
TM9SF3-203ENST00000464654 ARL2-SNX15V9GYD0 113 aa-0.04□□□□□ -2.42
TM9SF3-203ENST00000464654 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.04□□□□□ -2.42
TM9SF3-203ENST00000464654 DOPEY1Q5JWR5 2465 aa-0.04□□□□□ -2.42
TM9SF3-203ENST00000464654 POLA1P09884 1462 aaPredicted RBP-0.04□□□□□ -2.42
TM9SF3-203ENST00000464654 MRC2Q9UBG0 1479 aa-0.04□□□□□ -2.42
TM9SF3-203ENST00000464654 SCAPERQ9BY12 1400 aa-0.04□□□□□ -2.42
TM9SF3-203ENST00000464654 NSD3Q9BZ95 1437 aa-0.04□□□□□ -2.42
TM9SF3-203ENST00000464654 TEP1Q99973 2627 aaKnown RBP-0.05□□□□□ -2.42
TM9SF3-203ENST00000464654 SETD2Q9BYW2 2564 aaPredicted RBP-0.05□□□□□ -2.42
TM9SF3-203ENST00000464654 NAP1L6A6NFF2 107 aa-0.05□□□□□ -2.42
TM9SF3-203ENST00000464654 COX6CP09669 75 aa-0.05□□□□□ -2.42
TM9SF3-203ENST00000464654 IGLC1P0CG04 106 aa-0.05□□□□□ -2.42
TM9SF3-203ENST00000464654 TRAPPC2P0DI81 140 aa-0.05□□□□□ -2.42
TM9SF3-203ENST00000464654 TRAPPC2BP0DI82 140 aa-0.05□□□□□ -2.42
TM9SF3-203ENST00000464654 COX6B1P14854 86 aa-0.05□□□□□ -2.42
TM9SF3-203ENST00000464654 S100A1P23297 94 aa-0.05□□□□□ -2.42
TM9SF3-203ENST00000464654 KRTAP6-1Q3LI64 71 aa-0.05□□□□□ -2.42
TM9SF3-203ENST00000464654 FAM223AQ8IWN6 122 aa-0.05□□□□□ -2.42
TM9SF3-203ENST00000464654 EHBP1L1Q8N3D4 1523 aa-0.05□□□□□ -2.42
TM9SF3-203ENST00000464654 URB1O60287 2271 aaKnown RBP-0.05□□□□□ -2.42
TM9SF3-203ENST00000464654 PPRC1Q5VV67 1664 aaKnown RBP-0.05□□□□□ -2.42
TM9SF3-203ENST00000464654 PAPPAQ13219 1627 aa-0.05□□□□□ -2.42
TM9SF3-203ENST00000464654 PKHD1P08F94 4074 aa-0.06□□□□□ -2.42
TM9SF3-203ENST00000464654 PCLOQ9Y6V0 5065 aa-0.06□□□□□ -2.42
TM9SF3-203ENST00000464654 H3BQ15 152 aa-0.06□□□□□ -2.42
TM9SF3-203ENST00000464654 MRPS10P82664 201 aaKnown RBP-0.06□□□□□ -2.42
TM9SF3-203ENST00000464654 Q0VG73 95 aa-0.06□□□□□ -2.42
TM9SF3-203ENST00000464654 C10orf113Q5VZT2 155 aa-0.06□□□□□ -2.42
TM9SF3-203ENST00000464654 SFTA2Q6UW10 78 aa-0.06□□□□□ -2.42
TM9SF3-203ENST00000464654 FXYD6Q9H0Q3 95 aa-0.06□□□□□ -2.42
TM9SF3-203ENST00000464654 PRO1933Q9H354 126 aa-0.06□□□□□ -2.42
TM9SF3-203ENST00000464654 MAP1BP46821 2468 aaKnown RBP-0.06□□□□□ -2.42
TM9SF3-203ENST00000464654 BTAF1O14981 1849 aa-0.06□□□□□ -2.42
TM9SF3-203ENST00000464654 MUC2Q02817 5179 aa-0.06□□□□□ -2.42
TM9SF3-203ENST00000464654 STAB2Q8WWQ8 2551 aa-0.06□□□□□ -2.42
TM9SF3-203ENST00000464654 CHD8Q9HCK8 2581 aa-0.06□□□□□ -2.42
TM9SF3-203ENST00000464654 CSPG4Q6UVK1 2322 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 ARHGAP5Q13017 1502 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 TULP4Q9NRJ4 1543 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 EP300Q09472 2414 aaPredicted RBP-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 LRP1BQ9NZR2 4599 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 TRBV7-4A0A0J9YYF1 115 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 A0A1B0GWA3 101 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 CRYM-AS1A6NIL9 109 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 LOC730098B7Z3J9 87 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 K7EQZ3 153 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 SPRR1BP22528 89 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 SNCAP37840 140 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 KRTDAPP60985 99 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 GTF2H5Q6ZYL4 71 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 LINC01600Q96MT4 127 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 C12orf57Q99622 126 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 PRO1854Q9UHT4 67 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 PEG3Q9GZU2 1588 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 TENM2Q9NT68 2774 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 CREBBPQ92793 2442 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 MYO18BQ8IUG5 2567 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 SPTBN4Q9H254 2564 aa-0.07□□□□□ -2.42
TM9SF3-203ENST00000464654 KDM5AP29375 1690 aaKnown RBP-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms