RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 D6R8Y8 96 aa8.91□□□□□ -0.98
SNRNP40-203ENST00000463988 F8WDY8 70 aa8.91□□□□□ -0.98
SNRNP40-203ENST00000463988 MRPS36P82909 103 aaKnown RBP8.91□□□□□ -0.98
SNRNP40-203ENST00000463988 OR10D4PQ8NGN7 298 aa8.91□□□□□ -0.98
SNRNP40-203ENST00000463988 FAM104AQ969W3 186 aa8.91□□□□□ -0.98
SNRNP40-203ENST00000463988 A0A0J9YXV3 536 aa8.9□□□□□ -0.98
SNRNP40-203ENST00000463988 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.9□□□□□ -0.98
SNRNP40-203ENST00000463988 RPL39P62891 51 aaKnown RBP8.9□□□□□ -0.98
SNRNP40-203ENST00000463988 SPAG11BQ08648 103 aa8.9□□□□□ -0.98
SNRNP40-203ENST00000463988 MRPL54Q6P161 138 aaKnown RBP8.9□□□□□ -0.98
SNRNP40-203ENST00000463988 IGHV3OR16-9A0A0B4J2B5 98 aa8.89□□□□□ -0.99
SNRNP40-203ENST00000463988 A0A1W2PNN7 141 aa8.89□□□□□ -0.99
SNRNP40-203ENST00000463988 ATP5L2Q7Z4Y8 100 aa8.89□□□□□ -0.99
SNRNP40-203ENST00000463988 NPYP01303 97 aa8.88□□□□□ -0.99
SNRNP40-203ENST00000463988 KRTAP10-8P60410 259 aa8.88□□□□□ -0.99
SNRNP40-203ENST00000463988 C9orf116Q5BN46 136 aaPredicted RBP8.88□□□□□ -0.99
SNRNP40-203ENST00000463988 MRPL35Q9NZE8 188 aaKnown RBP8.88□□□□□ -0.99
SNRNP40-203ENST00000463988 ORMDL3Q8N138 153 aa8.87□□□□□ -0.99
SNRNP40-203ENST00000463988 ORAOV1Q8WV07 137 aa8.87□□□□□ -0.99
SNRNP40-203ENST00000463988 IFITM10A6NMD0 228 aa8.86□□□□□ -0.99
SNRNP40-203ENST00000463988 RAB5AP20339 215 aa8.86□□□□□ -0.99
SNRNP40-203ENST00000463988 RPL18AQ02543 176 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-203ENST00000463988 TMEM136Q6ZRR5 245 aa8.86□□□□□ -0.99
SNRNP40-203ENST00000463988 IMMP2LQ96T52 175 aa8.86□□□□□ -0.99
SNRNP40-203ENST00000463988 OPRPNQ99935 248 aaPredicted RBP8.86□□□□□ -0.99
SNRNP40-203ENST00000463988 PYGO1Q9Y3Y4 419 aa8.86□□□□□ -0.99
SNRNP40-203ENST00000463988 PRSS47A8MTI9 375 aa8.85□□□□□ -0.99
SNRNP40-203ENST00000463988 NDUFA1O15239 70 aa8.85□□□□□ -0.99
SNRNP40-203ENST00000463988 LRP2P98164 4655 aa8.85□□□□□ -0.99
SNRNP40-203ENST00000463988 PRELID3AQ96N28 172 aa8.85□□□□□ -0.99
SNRNP40-203ENST00000463988 TLX1NBP0CAT3 122 aa8.84□□□□□ -0.99
SNRNP40-203ENST00000463988 IFI27P40305 119 aaPredicted RBP8.84□□□□□ -0.99
SNRNP40-203ENST00000463988 PSORS1C2Q9UIG4 136 aa8.84□□□□□ -0.99
SNRNP40-203ENST00000463988 LAMTOR2Q9Y2Q5 125 aa8.84□□□□□ -0.99
SNRNP40-203ENST00000463988 A0A087WZ39 114 aa8.83□□□□□ -1
SNRNP40-203ENST00000463988 TGIF2-C20orf24A0A0A6YYL0 155 aa8.83□□□□□ -1
SNRNP40-203ENST00000463988 MT-ND6P03923 174 aa8.83□□□□□ -1
SNRNP40-203ENST00000463988 PNRC1Q12796 327 aaPredicted RBP8.82□□□□□ -1
SNRNP40-203ENST00000463988 IGLV4-3A0A075B6K6 122 aa8.81□□□□□ -1
SNRNP40-203ENST00000463988 KIAA0087Q14695 138 aa8.81□□□□□ -1
SNRNP40-203ENST00000463988 LINC00242Q5T6M2 205 aa8.81□□□□□ -1
SNRNP40-203ENST00000463988 C10orf25Q5T742 122 aa8.81□□□□□ -1
SNRNP40-203ENST00000463988 UNQ6190/PRO20217Q6UXQ8 127 aa8.81□□□□□ -1
SNRNP40-203ENST00000463988 PHF5AQ7RTV0 110 aaKnown RBP8.81□□□□□ -1
SNRNP40-203ENST00000463988 TMEM141Q96I45 108 aa8.81□□□□□ -1
SNRNP40-203ENST00000463988 MT-ND4LP03901 98 aa8.8□□□□□ -1
SNRNP40-203ENST00000463988 LINC01561Q8N1V8 128 aa8.8□□□□□ -1
SNRNP40-203ENST00000463988 ANAPC16Q96DE5 110 aa8.8□□□□□ -1
SNRNP40-203ENST00000463988 MAP1LC3AQ9H492 121 aa8.8□□□□□ -1
SNRNP40-203ENST00000463988 C6orf48Q9UBA6 75 aa8.8□□□□□ -1
SNRNP40-203ENST00000463988 TRBV30A0A0K0K1B3 111 aa8.79□□□□□ -1
SNRNP40-203ENST00000463988 NPSP0C0P6 89 aa8.79□□□□□ -1
SNRNP40-203ENST00000463988 C1orf137Q5JT78 98 aa8.79□□□□□ -1
SNRNP40-203ENST00000463988 TEX43Q6ZNM6 134 aa8.79□□□□□ -1
SNRNP40-203ENST00000463988 Q8N8P6 123 aa8.79□□□□□ -1
SNRNP40-203ENST00000463988 K7EMI3 77 aa8.78□□□□□ -1
SNRNP40-203ENST00000463988 UBE2D1P51668 147 aa8.78□□□□□ -1
SNRNP40-203ENST00000463988 ODF1Q14990 250 aa8.78□□□□□ -1
SNRNP40-203ENST00000463988 C2orf88Q9BSF0 95 aa8.78□□□□□ -1
SNRNP40-203ENST00000463988 CYSLTR1Q9Y271 337 aa8.78□□□□□ -1
SNRNP40-203ENST00000463988 LOC389332A0A1B0GUA5 103 aa8.77□□□□□ -1.01
SNRNP40-203ENST00000463988 IGLV7-43P04211 117 aa8.77□□□□□ -1.01
SNRNP40-203ENST00000463988 ORMDL2Q53FV1 153 aa8.77□□□□□ -1.01
SNRNP40-203ENST00000463988 C2orf66Q6UXQ4 117 aa8.77□□□□□ -1.01
SNRNP40-203ENST00000463988 DIRC1Q969H9 104 aa8.77□□□□□ -1.01
SNRNP40-203ENST00000463988 AMELXQ99217 191 aa8.77□□□□□ -1.01
SNRNP40-203ENST00000463988 FAM168BA1KXE4 195 aa8.76□□□□□ -1.01
SNRNP40-203ENST00000463988 GAGE2EQ4V326 116 aa8.76□□□□□ -1.01
SNRNP40-203ENST00000463988 Q6ZN92 141 aa8.76□□□□□ -1.01
SNRNP40-203ENST00000463988 VCX2Q9H322 139 aa8.76□□□□□ -1.01
SNRNP40-203ENST00000463988 GAGE2DQ9UEU5 116 aa8.76□□□□□ -1.01
SNRNP40-203ENST00000463988 NDUFC2-KCTD14E9PQ53 114 aa8.75□□□□□ -1.01
SNRNP40-203ENST00000463988 RAB14P61106 215 aa8.75□□□□□ -1.01
SNRNP40-203ENST00000463988 LINC00173Q6ZV60 143 aa8.75□□□□□ -1.01
SNRNP40-203ENST00000463988 PACRGQ96M98 296 aaPredicted RBP8.75□□□□□ -1.01
SNRNP40-203ENST00000463988 RNF213Q63HN8 5207 aa8.75□□□□□ -1.01
SNRNP40-203ENST00000463988 C2orf82Q6UX34 121 aa8.74□□□□□ -1.01
SNRNP40-203ENST00000463988 FAM19A5Q7Z5A7 132 aaPredicted RBP8.74□□□□□ -1.01
SNRNP40-203ENST00000463988 FAM19A3Q7Z5A8 133 aa8.74□□□□□ -1.01
SNRNP40-203ENST00000463988 NXT2Q9NPJ8 142 aaKnown RBP8.74□□□□□ -1.01
SNRNP40-203ENST00000463988 IGIPA6NJ69 53 aa8.73□□□□□ -1.01
SNRNP40-203ENST00000463988 G0S2P27469 103 aa8.73□□□□□ -1.01
SNRNP40-203ENST00000463988 PAPPA-AS1Q5QFB9 102 aa8.73□□□□□ -1.01
SNRNP40-203ENST00000463988 KRTAP11-1Q8IUC1 163 aa8.73□□□□□ -1.01
SNRNP40-203ENST00000463988 KRTAP7-1Q8IUC3 87 aa8.73□□□□□ -1.01
SNRNP40-203ENST00000463988 H0Y9J4 135 aa8.72□□□□□ -1.01
SNRNP40-203ENST00000463988 M0QXV9 152 aa8.72□□□□□ -1.01
SNRNP40-203ENST00000463988 PRSS2P07478 247 aa8.72□□□□□ -1.01
SNRNP40-203ENST00000463988 SEC11AP67812 179 aa8.72□□□□□ -1.01
SNRNP40-203ENST00000463988 C9orf129Q5T035 196 aaKnown RBP8.71□□□□□ -1.02
SNRNP40-203ENST00000463988 ZC2HC1BQ5TFG8 222 aa8.71□□□□□ -1.02
SNRNP40-203ENST00000463988 Q8IZM0 81 aa8.71□□□□□ -1.02
SNRNP40-203ENST00000463988 CTDSP1Q9GZU7 261 aa8.71□□□□□ -1.02
SNRNP40-203ENST00000463988 CKS1BP61024 79 aa8.7□□□□□ -1.02
SNRNP40-203ENST00000463988 HERVK_113P63121 156 aa8.7□□□□□ -1.02
SNRNP40-203ENST00000463988 UBE2BP63146 152 aa8.7□□□□□ -1.02
SNRNP40-203ENST00000463988 C6orf226Q5I0X4 101 aa8.7□□□□□ -1.02
SNRNP40-203ENST00000463988 TIMM17AQ99595 171 aa8.7□□□□□ -1.02
SNRNP40-203ENST00000463988 IGLV1-50A0A075B6I6 118 aa8.68□□□□□ -1.02
SNRNP40-203ENST00000463988 TRAV9-1A0A075B6T8 112 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms