RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 GCSHP23434 173 aa12.32□□□□□ -0.44
LMNB1-204ENST00000463908 Q6ZN92 141 aa12.32□□□□□ -0.44
LMNB1-204ENST00000463908 C5orf38Q86SI9 138 aa12.32□□□□□ -0.44
LMNB1-204ENST00000463908 HBDP02042 147 aa12.31□□□□□ -0.44
LMNB1-204ENST00000463908 LINC00310P59036 64 aa12.31□□□□□ -0.44
LMNB1-204ENST00000463908 PDZD11Q5EBL8 140 aa12.31□□□□□ -0.44
LMNB1-204ENST00000463908 CFAP161Q6P656 301 aa12.31□□□□□ -0.44
LMNB1-204ENST00000463908 BAGE3Q86Y29 109 aa12.31□□□□□ -0.44
LMNB1-204ENST00000463908 hDV102S1A0JD36 115 aa12.3□□□□□ -0.44
LMNB1-204ENST00000463908 COX7A2LO14548 114 aa12.3□□□□□ -0.44
LMNB1-204ENST00000463908 LINC01620Q4KN68 170 aa12.3□□□□□ -0.44
LMNB1-204ENST00000463908 HIGD2BQ4VC39 106 aa12.3□□□□□ -0.44
LMNB1-204ENST00000463908 NUPR1O60356 82 aa12.29□□□□□ -0.44
LMNB1-204ENST00000463908 PAPPA-AS1Q5QFB9 102 aa12.29□□□□□ -0.44
LMNB1-204ENST00000463908 FAM19A3Q7Z5A8 133 aa12.29□□□□□ -0.44
LMNB1-204ENST00000463908 C2orf88Q9BSF0 95 aa12.29□□□□□ -0.44
LMNB1-204ENST00000463908 GVQW2A0A096LPI5 108 aaPredicted RBP12.28□□□□□ -0.44
LMNB1-204ENST00000463908 IGHV1-58A0A0C4DH39 117 aa12.28□□□□□ -0.44
LMNB1-204ENST00000463908 CST9LQ9H4G1 147 aa12.28□□□□□ -0.44
LMNB1-204ENST00000463908 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.27□□□□□ -0.45
LMNB1-204ENST00000463908 FAM19A2Q8N3H0 131 aa12.27□□□□□ -0.45
LMNB1-204ENST00000463908 LINC00526Q96FQ7 95 aa12.27□□□□□ -0.45
LMNB1-204ENST00000463908 HIST1H2BKO60814 126 aa12.26□□□□□ -0.45
LMNB1-204ENST00000463908 SERF1AO75920 110 aa12.26□□□□□ -0.45
LMNB1-204ENST00000463908 HIST1H2BJP06899 126 aa12.26□□□□□ -0.45
LMNB1-204ENST00000463908 MALP21145 153 aa12.26□□□□□ -0.45
LMNB1-204ENST00000463908 HIST1H2BOP23527 126 aa12.26□□□□□ -0.45
LMNB1-204ENST00000463908 HIST1H2BBP33778 126 aa12.26□□□□□ -0.45
LMNB1-204ENST00000463908 HIST1H2BDP58876 126 aa12.26□□□□□ -0.45
LMNB1-204ENST00000463908 CNBPP62633 177 aaKnown RBP12.26□□□□□ -0.45
LMNB1-204ENST00000463908 HIST1H2BCP62807 126 aa12.26□□□□□ -0.45
LMNB1-204ENST00000463908 HIST2H2BEQ16778 126 aa12.26□□□□□ -0.45
LMNB1-204ENST00000463908 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.26□□□□□ -0.45
LMNB1-204ENST00000463908 HIST1H2BHQ93079 126 aa12.26□□□□□ -0.45
LMNB1-204ENST00000463908 HIST1H2BNQ99877 126 aa12.26□□□□□ -0.45
LMNB1-204ENST00000463908 HIST1H2BMQ99879 126 aa12.26□□□□□ -0.45
LMNB1-204ENST00000463908 A0A0J9YXV3 536 aa12.25□□□□□ -0.45
LMNB1-204ENST00000463908 HSBP1O75506 76 aa12.25□□□□□ -0.45
LMNB1-204ENST00000463908 PMVKQ15126 192 aa12.25□□□□□ -0.45
LMNB1-204ENST00000463908 C9orf163Q8N9P6 203 aa12.25□□□□□ -0.45
LMNB1-204ENST00000463908 DNAH8Q96JB1 4490 aa12.24□□□□□ -0.45
LMNB1-204ENST00000463908 A0A087WZ39 114 aa12.24□□□□□ -0.45
LMNB1-204ENST00000463908 FAM30AQ9NZY2 134 aa12.24□□□□□ -0.45
LMNB1-204ENST00000463908 APOBP04114 4563 aaKnown RBP12.23□□□□□ -0.45
LMNB1-204ENST00000463908 IGHV3-64A0A075B6Q5 118 aa12.23□□□□□ -0.45
LMNB1-204ENST00000463908 ATP5LO75964 103 aa12.22□□□□□ -0.45
LMNB1-204ENST00000463908 KRTAP4-5Q9BYR2 181 aa12.22□□□□□ -0.45
LMNB1-204ENST00000463908 IGLV4-69A0A075B6H9 119 aa12.21□□□□□ -0.45
LMNB1-204ENST00000463908 APOMO95445 188 aa12.21□□□□□ -0.45
LMNB1-204ENST00000463908 CDKN2A-AS1Q9UH64 79 aa12.21□□□□□ -0.45
LMNB1-204ENST00000463908 TINCRA0A1B0GVN0 87 aa12.2□□□□□ -0.46
LMNB1-204ENST00000463908 ZNF561-AS1K7EIQ3 104 aa12.2□□□□□ -0.46
LMNB1-204ENST00000463908 CDK2AP2O75956 126 aa12.2□□□□□ -0.46
LMNB1-204ENST00000463908 XGP55808 180 aa12.2□□□□□ -0.46
LMNB1-204ENST00000463908 NDUFA6P56556 154 aa12.2□□□□□ -0.46
LMNB1-204ENST00000463908 HERVK_113P63121 156 aa12.2□□□□□ -0.46
LMNB1-204ENST00000463908 SEC11AP67812 179 aa12.2□□□□□ -0.46
LMNB1-204ENST00000463908 SDIM1Q6ZPB5 146 aa12.2□□□□□ -0.46
LMNB1-204ENST00000463908 LINC01561Q8N1V8 128 aa12.19□□□□□ -0.46
LMNB1-204ENST00000463908 ORAOV1Q8WV07 137 aa12.19□□□□□ -0.46
LMNB1-204ENST00000463908 IFI27L1Q96BM0 104 aa12.19□□□□□ -0.46
LMNB1-204ENST00000463908 GEMIN7Q9H840 131 aaKnown RBP12.19□□□□□ -0.46
LMNB1-204ENST00000463908 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.18□□□□□ -0.46
LMNB1-204ENST00000463908 KIAA0087Q14695 138 aa12.18□□□□□ -0.46
LMNB1-204ENST00000463908 Q6ZSA8 131 aa12.18□□□□□ -0.46
LMNB1-204ENST00000463908 OR10D4PQ8NGN7 298 aa12.18□□□□□ -0.46
LMNB1-204ENST00000463908 IGLV5-45A0A087WSX0 123 aa12.17□□□□□ -0.46
LMNB1-204ENST00000463908 SPAG11BQ08648 103 aa12.17□□□□□ -0.46
LMNB1-204ENST00000463908 IGLC3P0DOY3 106 aa12.16□□□□□ -0.46
LMNB1-204ENST00000463908 SYCNQ0VAF6 134 aa12.16□□□□□ -0.46
LMNB1-204ENST00000463908 C2orf48Q96LS8 159 aa12.16□□□□□ -0.46
LMNB1-204ENST00000463908 LEPROTL1O95214 131 aa12.15□□□□□ -0.46
LMNB1-204ENST00000463908 Q6ZRU5 148 aa12.15□□□□□ -0.46
LMNB1-204ENST00000463908 LINC00469Q8N7U9 141 aa12.15□□□□□ -0.46
LMNB1-204ENST00000463908 HAMPP81172 84 aa12.14□□□□□ -0.47
LMNB1-204ENST00000463908 COA6Q5JTJ3 125 aaKnown RBP12.14□□□□□ -0.47
LMNB1-204ENST00000463908 CAMK2N2Q96S95 79 aa12.14□□□□□ -0.47
LMNB1-204ENST00000463908 TRAV12-1A0A0B4J245 112 aa12.13□□□□□ -0.47
LMNB1-204ENST00000463908 PANO1I0J062 215 aa12.13□□□□□ -0.47
LMNB1-204ENST00000463908 FABP4P15090 132 aa12.13□□□□□ -0.47
LMNB1-204ENST00000463908 C10orf25Q5T742 122 aa12.13□□□□□ -0.47
LMNB1-204ENST00000463908 CARD19Q96LW7 228 aa12.13□□□□□ -0.47
LMNB1-204ENST00000463908 CHAC1Q9BUX1 264 aa12.12□□□□□ -0.47
LMNB1-204ENST00000463908 CHTOPQ9Y3Y2 248 aaKnown RBP12.12□□□□□ -0.47
LMNB1-204ENST00000463908 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.12□□□□□ -0.47
LMNB1-204ENST00000463908 C11orf86A6NJI1 115 aa12.11□□□□□ -0.47
LMNB1-204ENST00000463908 SMIM1B2RUZ4 78 aa12.11□□□□□ -0.47
LMNB1-204ENST00000463908 UNQ6190/PRO20217Q6UXQ8 127 aa12.11□□□□□ -0.47
LMNB1-204ENST00000463908 F8WDY8 70 aa12.1□□□□□ -0.47
LMNB1-204ENST00000463908 ZNF22P17026 224 aaPredicted RBP12.1□□□□□ -0.47
LMNB1-204ENST00000463908 C2orf82Q6UX34 121 aa12.1□□□□□ -0.47
LMNB1-204ENST00000463908 HERC1Q15751 4861 aa12.1□□□□□ -0.47
LMNB1-204ENST00000463908 SPINK8P0C7L1 97 aa12.09□□□□□ -0.47
LMNB1-204ENST00000463908 PACRGQ96M98 296 aaPredicted RBP12.09□□□□□ -0.47
LMNB1-204ENST00000463908 MRPL35Q9NZE8 188 aaKnown RBP12.09□□□□□ -0.47
LMNB1-204ENST00000463908 TOMM7Q9P0U1 55 aa12.09□□□□□ -0.47
LMNB1-204ENST00000463908 HSPB8Q9UJY1 196 aa12.09□□□□□ -0.47
LMNB1-204ENST00000463908 NDUFA1O15239 70 aa12.08□□□□□ -0.48
LMNB1-204ENST00000463908 CHTF8P0CG12 524 aa12.08□□□□□ -0.48
LMNB1-204ENST00000463908 RNF151Q2KHN1 245 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms